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The map label for this gene is fdhD [H]

Identifier: 138894140

GI number: 138894140

Start: 522013

End: 522807

Strand: Direct

Name: fdhD [H]

Synonym: GTNG_0466

Alternate gene names: 138894140

Gene position: 522013-522807 (Clockwise)

Preceding gene: 138894139

Following gene: 138894141

Centisome position: 14.7

GC content: 48.43

Gene sequence:

>795_bases
TTGTTGGACGGGTTTGTGGCCAAAAGACGGTATATCGTTAAATATCGAAATGGACAGCTGGCCGAGAAAGAAGATGAGAT
CGCGCTCGAGTTTCCGCTGACGGTGGTAGTCAACGGGCAAGAGTTTGCGACAATCGTCTGCACACCGGGTCATATCGATG
AACTTGTCATTGGTTTTCTGGCGTCAGAAGGAGTGATTCGTGTAATCGATGACATTAAGGCGATGACGATTGACGGGGAG
CGGGGCTTCGTGTATGTGGAGCTCACCTCAGACGAGCTCCCGGCAAAACAGTTTTACGCGAAGCGATTCATCGGCTCGTG
CTGTGGAAAAAGCCGGCAATTTTATTTTTACAATGATGCGAAAACCGCCAAAACGATTGTCGGCGGCATTACTGTCAAAG
CGGATGATTGTGTGTGTTTAATGAAAACATTACACGAACAGTCAATTGATTTTGCGGCAACCGGTGGCCTTCATAACGCT
GCGCTTGCCACGCCGGATAGAATTGTCGTCATCCGCTCTGACATCGGCCGCCATAATGCGCTTGATAAATTGTACGGTTA
CTGCTTGCGCCATCAAGTGGCGATGAAAGACAAGCTTATTGTATTCAGCGGTCGCGTCTCGTCAGAAGTGCTCTTGAAGG
CGGCGAAAATGGGCATAAGCATCCTGTTGTCGAAATCAGCGCCGACGACGCTAGCCTTAGATTTGGCGGAAGAACTTGGA
ATTACCGTTGTCGGTTTTTTACGTGGACAGGATTTTAATGTGTATACGCATGAGAAGCGCATTATTATCGAATGA

Upstream 100 bases:

>100_bases
TACTGGGTGTAAACTACCGCCGCCTTTCGTAAGCAGAAGGATGATTGACCTTCTGTATCGAAAGGCGGCGGTTTTATTTT
GAACAAGGGAGGAGGGGGAC

Downstream 100 bases:

>100_bases
AAGGGGAGAAAAGGCCTTGAAAAACCGCTGGCTTATTGCTTTATCCGCTGTCGGCATCCATATCTCCATTGGATCGGTTT
ACGCATGGAGCAACTTTACG

Product: formate dehydrogenase accessory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MLDGFVAKRRYIVKYRNGQLAEKEDEIALEFPLTVVVNGQEFATIVCTPGHIDELVIGFLASEGVIRVIDDIKAMTIDGE
RGFVYVELTSDELPAKQFYAKRFIGSCCGKSRQFYFYNDAKTAKTIVGGITVKADDCVCLMKTLHEQSIDFAATGGLHNA
ALATPDRIVVIRSDIGRHNALDKLYGYCLRHQVAMKDKLIVFSGRVSSEVLLKAAKMGISILLSKSAPTTLALDLAEELG
ITVVGFLRGQDFNVYTHEKRIIIE

Sequences:

>Translated_264_residues
MLDGFVAKRRYIVKYRNGQLAEKEDEIALEFPLTVVVNGQEFATIVCTPGHIDELVIGFLASEGVIRVIDDIKAMTIDGE
RGFVYVELTSDELPAKQFYAKRFIGSCCGKSRQFYFYNDAKTAKTIVGGITVKADDCVCLMKTLHEQSIDFAATGGLHNA
ALATPDRIVVIRSDIGRHNALDKLYGYCLRHQVAMKDKLIVFSGRVSSEVLLKAAKMGISILLSKSAPTTLALDLAEELG
ITVVGFLRGQDFNVYTHEKRIIIE
>Mature_264_residues
MLDGFVAKRRYIVKYRNGQLAEKEDEIALEFPLTVVVNGQEFATIVCTPGHIDELVIGFLASEGVIRVIDDIKAMTIDGE
RGFVYVELTSDELPAKQFYAKRFIGSCCGKSRQFYFYNDAKTAKTIVGGITVKADDCVCLMKTLHEQSIDFAATGGLHNA
ALATPDRIVVIRSDIGRHNALDKLYGYCLRHQVAMKDKLIVFSGRVSSEVLLKAAKMGISILLSKSAPTTLALDLAEELG
ITVVGFLRGQDFNVYTHEKRIIIE

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG1526

COG function: function code C; Uncharacterized protein required for formate dehydrogenase activity

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhD family [H]

Homologues:

Organism=Escherichia coli, GI1790329, Length=257, Percent_Identity=29.5719844357977, Blast_Score=96, Evalue=4e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003786 [H]

Pfam domain/function: PF02634 FdhD-NarQ [H]

EC number: NA

Molecular weight: Translated: 29187; Mature: 29187

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDGFVAKRRYIVKYRNGQLAEKEDEIALEFPLTVVVNGQEFATIVCTPGHIDELVIGFL
CCCCHHHCCEEEEEECCCCCCCCCCCEEEEEEEEEEECCCCEEEEEECCCCHHHHHHHHH
ASEGVIRVIDDIKAMTIDGERGFVYVELTSDELPAKQFYAKRFIGSCCGKSRQFYFYNDA
HCCCEEEEECCCEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEECC
KTAKTIVGGITVKADDCVCLMKTLHEQSIDFAATGGLHNAALATPDRIVVIRSDIGRHNA
CCHHHEEEEEEEECCCHHHHHHHHHHHCCCEEECCCCCCCEECCCCEEEEEECCCCCCHH
LDKLYGYCLRHQVAMKDKLIVFSGRVSSEVLLKAAKMGISILLSKSAPTTLALDLAEELG
HHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCEEEEEECCCCCEEEEEEHHHCC
ITVVGFLRGQDFNVYTHEKRIIIE
CEEEEEEECCCCEEEEECCEEEEC
>Mature Secondary Structure
MLDGFVAKRRYIVKYRNGQLAEKEDEIALEFPLTVVVNGQEFATIVCTPGHIDELVIGFL
CCCCHHHCCEEEEEECCCCCCCCCCCEEEEEEEEEEECCCCEEEEEECCCCHHHHHHHHH
ASEGVIRVIDDIKAMTIDGERGFVYVELTSDELPAKQFYAKRFIGSCCGKSRQFYFYNDA
HCCCEEEEECCCEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEECC
KTAKTIVGGITVKADDCVCLMKTLHEQSIDFAATGGLHNAALATPDRIVVIRSDIGRHNA
CCHHHEEEEEEEECCCHHHHHHHHHHHCCCEEECCCCCCCEECCCCEEEEEECCCCCCHH
LDKLYGYCLRHQVAMKDKLIVFSGRVSSEVLLKAAKMGISILLSKSAPTTLALDLAEELG
HHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCEEEEEECCCCCEEEEEEHHHCC
ITVVGFLRGQDFNVYTHEKRIIIE
CEEEEEEECCCCEEEEECCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA