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The map label for this gene is yrhF [H]

Identifier: 138894139

GI number: 138894139

Start: 521399

End: 521752

Strand: Direct

Name: yrhF [H]

Synonym: GTNG_0465

Alternate gene names: 138894139

Gene position: 521399-521752 (Clockwise)

Preceding gene: 138894133

Following gene: 138894140

Centisome position: 14.69

GC content: 43.79

Gene sequence:

>354_bases
ATGGAGATGTCGAGAAAAGAAGCCGCGTTTAATGATATTGTGCGCAAAGTGCGTAAACAGTTGTTTGGCAAAGGACCGGA
ACGGATTAAAACGTATTTTGTCGACAACTTGGCGATCTCCATTTTGCATGGCAATTTAACGCCAACGGAAAAATTTATCG
CCCGCACGCCGGAAGGGCGGGACATGGTGCATGCAGCAAGAACGAAAATGATTCAAGATGTGTATGCCCAACATGTGCCT
GATGGTATGGAAGAACTTGCCGGATCGAAACTGCTTTACTTGTTCAGTGATATTAAAGTAGAAGAAGATATGGCCGTTTC
CGTGTTTGTGTTTGAAAAACCGATTGAATTGTGA

Upstream 100 bases:

>100_bases
CCACTATATACACATCTGTTATAGTTTATTATAGTATGGAGAAACATAGAACACAATGGATGAACAGGAAGTTTTTCAAA
CGTTGGCGAAAGGAGAGGGG

Downstream 100 bases:

>100_bases
CAAATTTGTGAACAATTTTAGTTGTGTTTCGCGATTGTTCATGGTATGCTTATGAATGTAAGTAACGTGAAAATAGGGAG
AAGCCTTGTCGGCTAACGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MEMSRKEAAFNDIVRKVRKQLFGKGPERIKTYFVDNLAISILHGNLTPTEKFIARTPEGRDMVHAARTKMIQDVYAQHVP
DGMEELAGSKLLYLFSDIKVEEDMAVSVFVFEKPIEL

Sequences:

>Translated_117_residues
MEMSRKEAAFNDIVRKVRKQLFGKGPERIKTYFVDNLAISILHGNLTPTEKFIARTPEGRDMVHAARTKMIQDVYAQHVP
DGMEELAGSKLLYLFSDIKVEEDMAVSVFVFEKPIEL
>Mature_117_residues
MEMSRKEAAFNDIVRKVRKQLFGKGPERIKTYFVDNLAISILHGNLTPTEKFIARTPEGRDMVHAARTKMIQDVYAQHVP
DGMEELAGSKLLYLFSDIKVEEDMAVSVFVFEKPIEL

Specific function: Unknown

COG id: COG5609

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018745 [H]

Pfam domain/function: PF10057 DUF2294 [H]

EC number: NA

Molecular weight: Translated: 13388; Mature: 13388

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEMSRKEAAFNDIVRKVRKQLFGKGPERIKTYFVDNLAISILHGNLTPTEKFIARTPEGR
CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEEEEECCCCCHHHHHHCCCCCH
DMVHAARTKMIQDVYAQHVPDGMEELAGSKLLYLFSDIKVEEDMAVSVFVFEKPIEL
HHHHHHHHHHHHHHHHHHCCCHHHHHCCCEEEEHHHCCEECCCCEEEEEEECCCCCC
>Mature Secondary Structure
MEMSRKEAAFNDIVRKVRKQLFGKGPERIKTYFVDNLAISILHGNLTPTEKFIARTPEGR
CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEEEEECCCCCHHHHHHCCCCCH
DMVHAARTKMIQDVYAQHVPDGMEELAGSKLLYLFSDIKVEEDMAVSVFVFEKPIEL
HHHHHHHHHHHHHHHHHHCCCHHHHHCCCEEEEHHHCCEECCCCEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9308178; 9384377 [H]