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The map label for this gene is liaH [H]

Identifier: 138894113

GI number: 138894113

Start: 492275

End: 492901

Strand: Direct

Name: liaH [H]

Synonym: GTNG_0439

Alternate gene names: 138894113

Gene position: 492275-492901 (Clockwise)

Preceding gene: 138894112

Following gene: 138894114

Centisome position: 13.87

GC content: 51.04

Gene sequence:

>627_bases
ATGATGGGATTGTTCTCACGTTTGAAAACGATCATTGAGGCTGATCTTCATGAATGGCTCGATGAAAAAGAAAAGAAAAA
TCCAATTGCGTTACTCAATCATTATTTGCGCCAATGTGAGCAGGAAGTTGAGCGGGTACGGCAGTTGCTTGAGCGCCAAT
ATGTGTTGAAAGAGAAGTTTGCCCGCGAACATCACGAGGCAGAACAGATGGCGGAAAAGCGGGCCAAGCAGGCGGAGGTA
GCCGAACGAGCTGGAGAAGAGGGATTGGCCGAGTTTGCGCGGCGTGAGCAGGCGCAATATACCGAACGGGCGGCCCGCTT
AAAGCAACTGCTCGAACAAGCAAGCCACGAGCTGTTTGAGTTGGAAGCGAAATATGAGGACATGAAGCATAAGCTGAAGG
ATATGCAGATGCGGCGTATGGAGTTGATGGGGCGCGAAAATGCGGCGCGGGCACATTACCGGATTCATCGGGTGATCAAT
GGGGACACCGGTCCTGCTCAGGCAGCGTTTGCGGATGCTGAAGTTTATCTTGATCGCCTTGAACGGCAAGTCCAGTCCGA
TTATTATCGGAACACGATCGATGCGCGCATCGCTCAGTTAGAAAAGCAGTTGCAAGAAGGGAAATAA

Upstream 100 bases:

>100_bases
TACCGTTCCAGGAACCGATGACCCGTTTGTCAATTTTGAAAAACAATGGGCTGAGCTGCAAAAGCATCATTAATCATATG
GATGGAAAAGGAGTGGATCA

Downstream 100 bases:

>100_bases
CCGGATATGCTAAAGGCGTACATAGTTACGCCTTTTTCATTTTGGACAACAGGGGGCTCCCCACATGCTTGATCAGCAGA
AGAAAACCGATTATGTCAGC

Product: phage shock protein A-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MMGLFSRLKTIIEADLHEWLDEKEKKNPIALLNHYLRQCEQEVERVRQLLERQYVLKEKFAREHHEAEQMAEKRAKQAEV
AERAGEEGLAEFARREQAQYTERAARLKQLLEQASHELFELEAKYEDMKHKLKDMQMRRMELMGRENAARAHYRIHRVIN
GDTGPAQAAFADAEVYLDRLERQVQSDYYRNTIDARIAQLEKQLQEGK

Sequences:

>Translated_208_residues
MMGLFSRLKTIIEADLHEWLDEKEKKNPIALLNHYLRQCEQEVERVRQLLERQYVLKEKFAREHHEAEQMAEKRAKQAEV
AERAGEEGLAEFARREQAQYTERAARLKQLLEQASHELFELEAKYEDMKHKLKDMQMRRMELMGRENAARAHYRIHRVIN
GDTGPAQAAFADAEVYLDRLERQVQSDYYRNTIDARIAQLEKQLQEGK
>Mature_208_residues
MMGLFSRLKTIIEADLHEWLDEKEKKNPIALLNHYLRQCEQEVERVRQLLERQYVLKEKFAREHHEAEQMAEKRAKQAEV
AERAGEEGLAEFARREQAQYTERAARLKQLLEQASHELFELEAKYEDMKHKLKDMQMRRMELMGRENAARAHYRIHRVIN
GDTGPAQAAFADAEVYLDRLERQVQSDYYRNTIDARIAQLEKQLQEGK

Specific function: Unknown

COG id: COG1842

COG function: function code KT; Phage shock protein A (IM30), suppresses sigma54-dependent transcription

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PspA/IM30 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007157 [H]

Pfam domain/function: PF04012 PspA_IM30 [H]

EC number: NA

Molecular weight: Translated: 24724; Mature: 24724

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMGLFSRLKTIIEADLHEWLDEKEKKNPIALLNHYLRQCEQEVERVRQLLERQYVLKEKF
CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AREHHEAEQMAEKRAKQAEVAERAGEEGLAEFARREQAQYTERAARLKQLLEQASHELFE
HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEAKYEDMKHKLKDMQMRRMELMGRENAARAHYRIHRVINGDTGPAQAAFADAEVYLDRL
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
ERQVQSDYYRNTIDARIAQLEKQLQEGK
HHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMGLFSRLKTIIEADLHEWLDEKEKKNPIALLNHYLRQCEQEVERVRQLLERQYVLKEKF
CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AREHHEAEQMAEKRAKQAEVAERAGEEGLAEFARREQAQYTERAARLKQLLEQASHELFE
HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEAKYEDMKHKLKDMQMRRMELMGRENAARAHYRIHRVINGDTGPAQAAFADAEVYLDRL
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
ERQVQSDYYRNTIDARIAQLEKQLQEGK
HHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377; 12207695 [H]