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The map label for this gene is 138894076

Identifier: 138894076

GI number: 138894076

Start: 453560

End: 454159

Strand: Reverse

Name: 138894076

Synonym: GTNG_0402

Alternate gene names: NA

Gene position: 454159-453560 (Counterclockwise)

Preceding gene: 138894082

Following gene: 138894071

Centisome position: 12.79

GC content: 42.33

Gene sequence:

>600_bases
ATGAACGATGCGAGCAAGAATGTGCGTAGACGAGGAGACGCACTGATCGAAAGCATTTATAACGCCACGATAGAGTTGAT
CAAAAAAGTCGGTTATACCAATCTTACTTTTCAGCAAATCGCACATGCTGCGAAAACCAGCCGTACTGTCTTATACCGGC
GCTGGAATACAAAATTTGACCTAATCCATGAAATCATGGAATATAAAACGAAGAACGCGCTCGGCGGGGAATTGATTGAT
AAGATCGAGGACACAGGAAGCCTGCGTGGTGACTTGTTGCAGTTGCTTACCCTCTATCAAAGCATTTATACAGAGGGTGG
GCTTGAAATAATGAATGCGATTTTATTTGAGATAGGACAAGACAGCGAAAAATTGTCGAAGATTGAAACTAACGCTAGAA
ATAAAAATATCTTGGTCATGCGTAAACTGCTTGGGTTCGCAAAAAACCGGGGAGAAAAAATAAAAGAGGTCAGCGACGCG
ACACTGACCTTGCCTTTTGACCTCATCCGAGTAGAAAATCTCCTGCGCAGAGAGACTATGGATGCAAAACGTCTTGAGTT
ATTGGTTGATGAAATATTGCTTCCGGTTTTTCTTGCTTAA

Upstream 100 bases:

>100_bases
AATTTTTTTAAATTATGATATAATGTTTTCCGATTTTTGCTGAAATATAAGCTTGAAAAACTCGTGTTGGCAAACACTTT
GCGGAGAGATGGTGAATGAA

Downstream 100 bases:

>100_bases
CGAAAATATGATTGCTGTTTTATGAAATCAAGGGAGTCAGTGAATTATAATGAAAATCAGTTGCCTTTAGTAAAAGTTTT
TTGATCCGTGACCATGTATG

Product: transcription regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulator TetR Family; Transcription Regulator; TetR/AcrR Family Transcriptional Regulator

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MNDASKNVRRRGDALIESIYNATIELIKKVGYTNLTFQQIAHAAKTSRTVLYRRWNTKFDLIHEIMEYKTKNALGGELID
KIEDTGSLRGDLLQLLTLYQSIYTEGGLEIMNAILFEIGQDSEKLSKIETNARNKNILVMRKLLGFAKNRGEKIKEVSDA
TLTLPFDLIRVENLLRRETMDAKRLELLVDEILLPVFLA

Sequences:

>Translated_199_residues
MNDASKNVRRRGDALIESIYNATIELIKKVGYTNLTFQQIAHAAKTSRTVLYRRWNTKFDLIHEIMEYKTKNALGGELID
KIEDTGSLRGDLLQLLTLYQSIYTEGGLEIMNAILFEIGQDSEKLSKIETNARNKNILVMRKLLGFAKNRGEKIKEVSDA
TLTLPFDLIRVENLLRRETMDAKRLELLVDEILLPVFLA
>Mature_199_residues
MNDASKNVRRRGDALIESIYNATIELIKKVGYTNLTFQQIAHAAKTSRTVLYRRWNTKFDLIHEIMEYKTKNALGGELID
KIEDTGSLRGDLLQLLTLYQSIYTEGGLEIMNAILFEIGQDSEKLSKIETNARNKNILVMRKLLGFAKNRGEKIKEVSDA
TLTLPFDLIRVENLLRRETMDAKRLELLVDEILLPVFLA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22788; Mature: 22788

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDASKNVRRRGDALIESIYNATIELIKKVGYTNLTFQQIAHAAKTSRTVLYRRWNTKFD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHH
LIHEIMEYKTKNALGGELIDKIEDTGSLRGDLLQLLTLYQSIYTEGGLEIMNAILFEIGQ
HHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC
DSEKLSKIETNARNKNILVMRKLLGFAKNRGEKIKEVSDATLTLPFDLIRVENLLRRETM
CHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCEEECHHHHHHHHHHHHHHHH
DAKRLELLVDEILLPVFLA
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNDASKNVRRRGDALIESIYNATIELIKKVGYTNLTFQQIAHAAKTSRTVLYRRWNTKFD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHH
LIHEIMEYKTKNALGGELIDKIEDTGSLRGDLLQLLTLYQSIYTEGGLEIMNAILFEIGQ
HHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC
DSEKLSKIETNARNKNILVMRKLLGFAKNRGEKIKEVSDATLTLPFDLIRVENLLRRETM
CHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCEEECHHHHHHHHHHHHHHHH
DAKRLELLVDEILLPVFLA
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA