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The map label for this gene is yfkA [H]

Identifier: 138894071

GI number: 138894071

Start: 446874

End: 447998

Strand: Reverse

Name: yfkA [H]

Synonym: GTNG_0397

Alternate gene names: 138894071

Gene position: 447998-446874 (Counterclockwise)

Preceding gene: 138894076

Following gene: 138894068

Centisome position: 12.62

GC content: 50.49

Gene sequence:

>1125_bases
ATGCGTTCATCGACAATGCCGGCGATTACACCGGCATATGACCCGTGGGAGGCATATGTCGATATTGAAGAATACGGGAA
ACTTGAGTTGACCAATATTGAGTTGACCACAACGACACTTTGCAATATGCGCTGTGAACATTGCGCCGTAGGCTATACAT
TGGCAACGAAAGATCCGGATGCGTTGCCGCTTGATTTATTGATCCGTCGTCTCGAAGAAATTCCGCATTTGCGTTCCTTA
AGCATCACCGGCGGCGAACCGATGCTATCGTTAACATCGGTGGAACGATACGTCGTTCCTCTGCTTCGCTATGCACACGA
ACGCGGGGTGCGGACGCAGCTCAATTCGAATTTAACGCTTGATTTAGCTCGCTATGAACGAATCATTCCGTATTTGGATG
TGCTCCACATCTCCCACAACTGGGGGACGATCGACGATTTTGTCGACGGCGGCTTTGCCATGATGGAACGAAAACCGACG
CGCGCCCAGCGTGAAAAATATTTCCAGCGTATGCTCGATAACGCGAAAGCGCTGGCGAAATCAGGGGTAATGGTGTCCGC
AGAAACGATGATCAACAAGCGGACGGTTCGTCATTTGGAAACGATCCACCGCCAAGTCGTCGAGGAAATGGGCTGCCGAC
GGCATGAAATTCATCCGATGTACCCGAGCGATTTTGCGGGTGCGCTTGAGACGTTAAGCTTAGAGGAGTTGCGCCAAGCG
ATCCATCATTTACTCGATATTCGTGATGAAAATGTCTGGATGTTGTTTGGCACGTTGCCGTTTTATCCATGCAGTGATAA
TGAAGACGATCTTCGCCTATTAAAGCGGCTGTATGAAAGCAAAAACGTCACCGTGCGCAACGACCCGGACGGCCGCTCGC
GGCTTAACATCAACATTTTTACCGGTGATGTCATCGTTACCGATTTCGGTGATGAACCGCCACTTGGCAACATCATTCAT
GATTCGTTGCCGGACGTGTATCGCCAATGGCGCCGTTCGAAACTCGCTAACGAACTTCTTTGCCATTGTCCGGCCGCGCG
TTGCCTCGGACCAAACGTGCTTGTCAAACAAACCTATTACCGCAATGTCGATTTTACAAAACGTTCGGCACGCGTTGCAC
GGTAA

Upstream 100 bases:

>100_bases
AATGGAATGTATAAGAAACGAGCCAAAACGATTGACAAGCGTGAAGACGGAGGCTGATAATGGACGGTGGGATTTTAAAT
GGAAAAAGGAGAAGAAGGCC

Downstream 100 bases:

>100_bases
AAGAAACTTCGAACAAACAAAGTGCGGCCGATAGGTGTCATTCACGTGCATATAGCGGCATAAGAGAAGGTGTCCCATTA
CCTCTGGGACACCTTCGTTA

Product: thioredoxin-like oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 374; Mature: 374

Protein sequence:

>374_residues
MRSSTMPAITPAYDPWEAYVDIEEYGKLELTNIELTTTTLCNMRCEHCAVGYTLATKDPDALPLDLLIRRLEEIPHLRSL
SITGGEPMLSLTSVERYVVPLLRYAHERGVRTQLNSNLTLDLARYERIIPYLDVLHISHNWGTIDDFVDGGFAMMERKPT
RAQREKYFQRMLDNAKALAKSGVMVSAETMINKRTVRHLETIHRQVVEEMGCRRHEIHPMYPSDFAGALETLSLEELRQA
IHHLLDIRDENVWMLFGTLPFYPCSDNEDDLRLLKRLYESKNVTVRNDPDGRSRLNINIFTGDVIVTDFGDEPPLGNIIH
DSLPDVYRQWRRSKLANELLCHCPAARCLGPNVLVKQTYYRNVDFTKRSARVAR

Sequences:

>Translated_374_residues
MRSSTMPAITPAYDPWEAYVDIEEYGKLELTNIELTTTTLCNMRCEHCAVGYTLATKDPDALPLDLLIRRLEEIPHLRSL
SITGGEPMLSLTSVERYVVPLLRYAHERGVRTQLNSNLTLDLARYERIIPYLDVLHISHNWGTIDDFVDGGFAMMERKPT
RAQREKYFQRMLDNAKALAKSGVMVSAETMINKRTVRHLETIHRQVVEEMGCRRHEIHPMYPSDFAGALETLSLEELRQA
IHHLLDIRDENVWMLFGTLPFYPCSDNEDDLRLLKRLYESKNVTVRNDPDGRSRLNINIFTGDVIVTDFGDEPPLGNIIH
DSLPDVYRQWRRSKLANELLCHCPAARCLGPNVLVKQTYYRNVDFTKRSARVAR
>Mature_374_residues
MRSSTMPAITPAYDPWEAYVDIEEYGKLELTNIELTTTTLCNMRCEHCAVGYTLATKDPDALPLDLLIRRLEEIPHLRSL
SITGGEPMLSLTSVERYVVPLLRYAHERGVRTQLNSNLTLDLARYERIIPYLDVLHISHNWGTIDDFVDGGFAMMERKPT
RAQREKYFQRMLDNAKALAKSGVMVSAETMINKRTVRHLETIHRQVVEEMGCRRHEIHPMYPSDFAGALETLSLEELRQA
IHHLLDIRDENVWMLFGTLPFYPCSDNEDDLRLLKRLYESKNVTVRNDPDGRSRLNINIFTGDVIVTDFGDEPPLGNIIH
DSLPDVYRQWRRSKLANELLCHCPAARCLGPNVLVKQTYYRNVDFTKRSARVAR

Specific function: Unknown

COG id: COG0535

COG function: function code R; Predicted Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007197
- InterPro:   IPR014866 [H]

Pfam domain/function: PF04055 Radical_SAM; PF08756 YfkB [H]

EC number: NA

Molecular weight: Translated: 43129; Mature: 43129

Theoretical pI: Translated: 6.70; Mature: 6.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSSTMPAITPAYDPWEAYVDIEEYGKLELTNIELTTTTLCNMRCEHCAVGYTLATKDPD
CCCCCCCCCCCCCCCHHHEEEHHHCCCEEEEEEEEEHHHHHHCCHHHHEECEEEECCCCC
ALPLDLLIRRLEEIPHLRSLSITGGEPMLSLTSVERYVVPLLRYAHERGVRTQLNSNLTL
CCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCEE
DLARYERIIPYLDVLHISHNWGTIDDFVDGGFAMMERKPTRAQREKYFQRMLDNAKALAK
EHHHHHHHHHHHHHEEEECCCCCHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
SGVMVSAETMINKRTVRHLETIHRQVVEEMGCRRHEIHPMYPSDFAGALETLSLEELRQA
CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCHHHHHHH
IHHLLDIRDENVWMLFGTLPFYPCSDNEDDLRLLKRLYESKNVTVRNDPDGRSRLNINIF
HHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCEEEEEEE
TGDVIVTDFGDEPPLGNIIHDSLPDVYRQWRRSKLANELLCHCPAARCLGPNVLVKQTYY
ECCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCEEHHHHH
RNVDFTKRSARVAR
CCCCCCHHHHCCCC
>Mature Secondary Structure
MRSSTMPAITPAYDPWEAYVDIEEYGKLELTNIELTTTTLCNMRCEHCAVGYTLATKDPD
CCCCCCCCCCCCCCCHHHEEEHHHCCCEEEEEEEEEHHHHHHCCHHHHEECEEEECCCCC
ALPLDLLIRRLEEIPHLRSLSITGGEPMLSLTSVERYVVPLLRYAHERGVRTQLNSNLTL
CCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCEE
DLARYERIIPYLDVLHISHNWGTIDDFVDGGFAMMERKPTRAQREKYFQRMLDNAKALAK
EHHHHHHHHHHHHHEEEECCCCCHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
SGVMVSAETMINKRTVRHLETIHRQVVEEMGCRRHEIHPMYPSDFAGALETLSLEELRQA
CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCHHHHHHH
IHHLLDIRDENVWMLFGTLPFYPCSDNEDDLRLLKRLYESKNVTVRNDPDGRSRLNINIF
HHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCEEEEEEE
TGDVIVTDFGDEPPLGNIIHDSLPDVYRQWRRSKLANELLCHCPAARCLGPNVLVKQTYY
ECCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCEEHHHHH
RNVDFTKRSARVAR
CCCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969503; 9384377 [H]