| Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
|---|---|
| Accession | NC_009328 |
| Length | 3,550,319 |
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The map label for this gene is hutP
Identifier: 138894035
GI number: 138894035
Start: 410832
End: 411281
Strand: Direct
Name: hutP
Synonym: GTNG_0361
Alternate gene names: 138894035
Gene position: 410832-411281 (Clockwise)
Preceding gene: 138894024
Following gene: 138894036
Centisome position: 11.57
GC content: 56.0
Gene sequence:
>450_bases ATGGGGAAAGAAAAATCGGTGCGCATTGGTCGTCAGGCGCTTTTGCTGGCGATGCTTGACGAAGGAGAGGAAGGAGCAAT TCTCGACGAGCTTCGGGCAAGCAACTGGCGCTATTGCCAAGGACGCGTCGGGGCGATGGAGCCGCAAAAAATCGTCGCAG CGATCGAAACGGCGGCGAAACGTCATGAAGTGGTTGACGGCAGTTTATACCGCGACATGCATGCTTTGTATCATGCCATT TTAGAGGCGGTGCACGGCGTGACGAGGGGGCAGGTTGAGTTAGGAGATTTGTTGAGAACGGCTGGCCTTCGTTTCGCTGT TGTGCGAGGAACACCGTATGAACAGCCAAAAGAAGGGGAATGGATCGCCGTCGCATTGTACGGGACGATCGGCGCTCCGG TGCGCGGGCTTGAGCACGAAGCGGTCGGGCTCGGAATCAATCATATATAG
Upstream 100 bases:
>100_bases TGATAATAAGTTAATTTGTTAAAATTTGGAAAAAGTGTTGACTCGGTTTTCCTTGCCGTCATACAATAGAAAAAAAGAGG AAATTAGGGGTAGCAACCAA
Downstream 100 bases:
>100_bases GATTGCAGGAAAGGGAGACGTGCGGCGGCTCGGACAATGAGATAGAGTAGGATCAGCCTAGAGCGATGAGTCATGAGGAG GCGAATACTGCCTGAAACGG
Product: anti-terminator HutP
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MGKEKSVRIGRQALLLAMLDEGEEGAILDELRASNWRYCQGRVGAMEPQKIVAAIETAAKRHEVVDGSLYRDMHALYHAI LEAVHGVTRGQVELGDLLRTAGLRFAVVRGTPYEQPKEGEWIAVALYGTIGAPVRGLEHEAVGLGINHI
Sequences:
>Translated_149_residues MGKEKSVRIGRQALLLAMLDEGEEGAILDELRASNWRYCQGRVGAMEPQKIVAAIETAAKRHEVVDGSLYRDMHALYHAI LEAVHGVTRGQVELGDLLRTAGLRFAVVRGTPYEQPKEGEWIAVALYGTIGAPVRGLEHEAVGLGINHI >Mature_148_residues GKEKSVRIGRQALLLAMLDEGEEGAILDELRASNWRYCQGRVGAMEPQKIVAAIETAAKRHEVVDGSLYRDMHALYHAIL EAVHGVTRGQVELGDLLRTAGLRFAVVRGTPYEQPKEGEWIAVALYGTIGAPVRGLEHEAVGLGINHI
Specific function: Antiterminator that binds to cis-acting regulatory sequences on the mRNA in the presence of histidine, thereby suppressing transcription termination and activating the hut operon for histidine utilization
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hutP family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HUTP_GEOTN (A4IK89)
Other databases:
- EMBL: CP000557 - RefSeq: YP_001124488.1 - ProteinModelPortal: A4IK89 - SMR: A4IK89 - STRING: A4IK89 - GeneID: 4965305 - GenomeReviews: CP000557_GR - KEGG: gtn:GTNG_0361 - NMPDR: fig|420246.5.peg.346 - eggNOG: NOG12238 - HOGENOM: HBG338483 - OMA: GEWIAVA - ProtClustDB: PRK03065 - BioCyc: GTHE420246:GTNG_0361-MONOMER - GO: GO:0006350 - HAMAP: MF_00779 - InterPro: IPR015111
Pfam domain/function: PF09021 HutP
EC number: NA
Molecular weight: Translated: 16280; Mature: 16149
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKEKSVRIGRQALLLAMLDEGEEGAILDELRASNWRYCQGRVGAMEPQKIVAAIETAAK CCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHHH RHEVVDGSLYRDMHALYHAILEAVHGVTRGQVELGDLLRTAGLRFAVVRGTPYEQPKEGE HHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCC WIAVALYGTIGAPVRGLEHEAVGLGINHI EEEEEEECCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GKEKSVRIGRQALLLAMLDEGEEGAILDELRASNWRYCQGRVGAMEPQKIVAAIETAAK CCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHHH RHEVVDGSLYRDMHALYHAILEAVHGVTRGQVELGDLLRTAGLRFAVVRGTPYEQPKEGE HHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCC WIAVALYGTIGAPVRGLEHEAVGLGINHI EEEEEEECCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA