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The map label for this gene is 138894034

Identifier: 138894034

GI number: 138894034

Start: 409658

End: 410503

Strand: Reverse

Name: 138894034

Synonym: GTNG_0360

Alternate gene names: NA

Gene position: 410503-409658 (Counterclockwise)

Preceding gene: 138894040

Following gene: 138894033

Centisome position: 11.56

GC content: 50.59

Gene sequence:

>846_bases
ATGAGGGAACAGAAAGCATGGTATATCAATGGTTTTATCGGCATCGGTGGCATCGTTTTGCTTCTCATTGTCGGGTTTTT
CTTCCTCGTTCAAGAGCTATTTTTGCCCGCCATTTTGTTTTTCATCATTGCTGTTTTGCTCGCTACCGGCATCACAATCG
TCCATCCCAATCAAGCGAAAGTGCTCACCTTTTTCGGCCGCTATTTTGGCACAATTCGCGACAGCGGGTTGTTTCTCACC
GTACCGCTCACAGTCCGGAAAAACGTGTCGCTGCGCGTGCGCAACTTCACCAGCAGCAAACTGAAAGTCAACGACATCCA
AGGTAATCCGATCGAAATCGCCGCCGTCGTTGTCTTCCGCGTCATTGACTCAGCCAAAGCAGTGTTTGATGTGGACGATT
ATGAACAGTTCGTCGAAATTCAAAGCGAAGCGGCCATCCGCCATGTCGCCACGAAATATCCGTACGATACGTTTGAGGAC
GATAGCGAAGTCACGTTGCGCGGCAACGCGGATGTCATTTCTGATGTGCTTGCTGCGGAACTGCAAGAATGTCTGCGCGT
TGCTGGGGTAGAAGTGGTTGAAGCACGCCTCACCCATTTAGCCTACTCCCCAGAAATTGCGGGCGCTATGCTCCAACCCC
AGCAAGCAGCTCCCATTTTGGCAGCGAGGAAAAAAATCGTCCAGGGAGCCGTCTCCATGGCGCAAATGGCGATTGAACAG
CTTGACAAAGAAAACATTTTAGAGTTAGATGATGAACGAAAGGCAGCGATGGTGAATAACTTAATGGTGGCGATCGTCTC
CGAACGCGCCACCCAGCCGGTGATCAACACGGGCAGCCTATATTAA

Upstream 100 bases:

>100_bases
ATCATTTTTGGTAAAAATCCACAACAACACATGATTTACATTTTATTGAATATGTGATATCATTAAAATATCAAATTAAT
ATGAGTTGAGGGGGACAATC

Downstream 100 bases:

>100_bases
CGGTTGTGGAGTGCGATGACAAAGAAAAAACAATTTCCTTTACGCATTGACCATGATTTATATGCTGTGTTGGAGCAATG
GGCGCAAGACGAGTTTCGTA

Product: somatin-like protein

Products: NA

Alternate protein names: Integral Membrane Protein; SPFH Domain/Band 7 Family Protein; SPFH Domain-Containing Protein/Band 7 Family Protein; Band 7 Family Protein; Somatin-Like Protein; SPFH Domain / Band 7 Family Protein; SPFH Domain-Containing Protein; Integral Membrane Protease Subunit; SPFH/Band 7 Domain-Containing Protein; Membrane Protease Family Stomatin/Prohibitin-Like Protein; Membrane Protease Subunits Stomatin/Prohibitin Homologs; Band 7 Family Membrane Protein; Transmembrane Protein; Membrane Protease Subunit Stomatin/Prohibitin; HFLK Protein

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MREQKAWYINGFIGIGGIVLLLIVGFFFLVQELFLPAILFFIIAVLLATGITIVHPNQAKVLTFFGRYFGTIRDSGLFLT
VPLTVRKNVSLRVRNFTSSKLKVNDIQGNPIEIAAVVVFRVIDSAKAVFDVDDYEQFVEIQSEAAIRHVATKYPYDTFED
DSEVTLRGNADVISDVLAAELQECLRVAGVEVVEARLTHLAYSPEIAGAMLQPQQAAPILAARKKIVQGAVSMAQMAIEQ
LDKENILELDDERKAAMVNNLMVAIVSERATQPVINTGSLY

Sequences:

>Translated_281_residues
MREQKAWYINGFIGIGGIVLLLIVGFFFLVQELFLPAILFFIIAVLLATGITIVHPNQAKVLTFFGRYFGTIRDSGLFLT
VPLTVRKNVSLRVRNFTSSKLKVNDIQGNPIEIAAVVVFRVIDSAKAVFDVDDYEQFVEIQSEAAIRHVATKYPYDTFED
DSEVTLRGNADVISDVLAAELQECLRVAGVEVVEARLTHLAYSPEIAGAMLQPQQAAPILAARKKIVQGAVSMAQMAIEQ
LDKENILELDDERKAAMVNNLMVAIVSERATQPVINTGSLY
>Mature_281_residues
MREQKAWYINGFIGIGGIVLLLIVGFFFLVQELFLPAILFFIIAVLLATGITIVHPNQAKVLTFFGRYFGTIRDSGLFLT
VPLTVRKNVSLRVRNFTSSKLKVNDIQGNPIEIAAVVVFRVIDSAKAVFDVDDYEQFVEIQSEAAIRHVATKYPYDTFED
DSEVTLRGNADVISDVLAAELQECLRVAGVEVVEARLTHLAYSPEIAGAMLQPQQAAPILAARKKIVQGAVSMAQMAIEQ
LDKENILELDDERKAAMVNNLMVAIVSERATQPVINTGSLY

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31047; Mature: 31047

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREQKAWYINGFIGIGGIVLLLIVGFFFLVQELFLPAILFFIIAVLLATGITIVHPNQAK
CCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHH
VLTFFGRYFGTIRDSGLFLTVPLTVRKNVSLRVRNFTSSKLKVNDIQGNPIEIAAVVVFR
HHHHHHHHHHHHCCCCEEEEEEEEEECCCEEEEEECCCCCEEEECCCCCCHHHHHHHHHH
VIDSAKAVFDVDDYEQFVEIQSEAAIRHVATKYPYDTFEDDSEVTLRGNADVISDVLAAE
HHHHHHHEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCHHHHHHHHHHH
LQECLRVAGVEVVEARLTHLAYSPEIAGAMLQPQQAAPILAARKKIVQGAVSMAQMAIEQ
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHH
LDKENILELDDERKAAMVNNLMVAIVSERATQPVINTGSLY
HCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MREQKAWYINGFIGIGGIVLLLIVGFFFLVQELFLPAILFFIIAVLLATGITIVHPNQAK
CCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHH
VLTFFGRYFGTIRDSGLFLTVPLTVRKNVSLRVRNFTSSKLKVNDIQGNPIEIAAVVVFR
HHHHHHHHHHHHCCCCEEEEEEEEEECCCEEEEEECCCCCEEEECCCCCCHHHHHHHHHH
VIDSAKAVFDVDDYEQFVEIQSEAAIRHVATKYPYDTFEDDSEVTLRGNADVISDVLAAE
HHHHHHHEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCHHHHHHHHHHH
LQECLRVAGVEVVEARLTHLAYSPEIAGAMLQPQQAAPILAARKKIVQGAVSMAQMAIEQ
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHH
LDKENILELDDERKAAMVNNLMVAIVSERATQPVINTGSLY
HCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA