| Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
|---|---|
| Accession | NC_009328 |
| Length | 3,550,319 |
Click here to switch to the map view.
The map label for this gene is pucB [H]
Identifier: 138894030
GI number: 138894030
Start: 407189
End: 407827
Strand: Reverse
Name: pucB [H]
Synonym: GTNG_0356
Alternate gene names: 138894030
Gene position: 407827-407189 (Counterclockwise)
Preceding gene: 138894031
Following gene: 138894029
Centisome position: 11.49
GC content: 56.96
Gene sequence:
>639_bases ATGAGTGAACTCACGATTGCAGGCATTTACTTAGCCGCTGGACAGAGTCGGCGGATGGGAACGGATAAACGCGCCTTGCC TTGGGGGGATGGGACGCTTGGGACGGCCGGTCTCAAGGCAGCGCTTCATTCCTGCCTCTCACCTATCATCGTTGTCGTTC CACCAACCGATGCGCTCGTTTGGCTTCCTGACGCGCTGCTAAACCACGACAAATGCCGTCTTGTCCGTTGCGCCGCCTGC CACCGGGGGCAGGCACACTCGCTTGCCTGCGGCTTACAAGAGACGATTGTTGTAGGGGCGGACGCTGCCGCAGTATTATT GGCGGATCAGCCGTTTGTCACGACAGAAACGATCGATGCTCTTGCCCGTTTTTATCGCCAGCACCATCCTGATTACGCCG CCTTTTCCCGCTTCGGCACCCCCATGCCTCCAGTCATCTGGGGAAAACAGATGTTTCCTGCCTTATTGGCACTTAGGGGA GATGCTGGCGGGCGCAGGCTGTTTTGTGAGCCCCATTGGCGCGGTCTCTTATACGAAGGCGACGAGTCAATCGGCATGGA CATCGACACAAAAGAGGACTATGAGCGTGCTGTCATCTATCGAGAAGTAAAGGAGGGACATTCTCGTGGCCGTCGGTAA
Upstream 100 bases:
>100_bases TTGGACTGCCAATTGGAGCGCGCAGCCCGCATGAAATTGCTATAAGCATCACCGCCGAACTAATTAACGTGCTGCGCGGA GGGCCGATGGAGACTGCACG
Downstream 100 bases:
>100_bases AAGCATCATCCGCAAAGAAGCATGGGATAAGGTGACCGGCCGAGCGAAATATACGAACGATTTCAAAGAACAAGGAATGC TTCATGCCAAGCTCGTCACC
Product: xanthine dehydrogenase molybdopterin-guanine dinucleotide biosynthesis subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 212; Mature: 211
Protein sequence:
>212_residues MSELTIAGIYLAAGQSRRMGTDKRALPWGDGTLGTAGLKAALHSCLSPIIVVVPPTDALVWLPDALLNHDKCRLVRCAAC HRGQAHSLACGLQETIVVGADAAAVLLADQPFVTTETIDALARFYRQHHPDYAAFSRFGTPMPPVIWGKQMFPALLALRG DAGGRRLFCEPHWRGLLYEGDESIGMDIDTKEDYERAVIYREVKEGHSRGRR
Sequences:
>Translated_212_residues MSELTIAGIYLAAGQSRRMGTDKRALPWGDGTLGTAGLKAALHSCLSPIIVVVPPTDALVWLPDALLNHDKCRLVRCAAC HRGQAHSLACGLQETIVVGADAAAVLLADQPFVTTETIDALARFYRQHHPDYAAFSRFGTPMPPVIWGKQMFPALLALRG DAGGRRLFCEPHWRGLLYEGDESIGMDIDTKEDYERAVIYREVKEGHSRGRR >Mature_211_residues SELTIAGIYLAAGQSRRMGTDKRALPWGDGTLGTAGLKAALHSCLSPIIVVVPPTDALVWLPDALLNHDKCRLVRCAACH RGQAHSLACGLQETIVVGADAAAVLLADQPFVTTETIDALARFYRQHHPDYAAFSRFGTPMPPVIWGKQMFPALLALRGD AGGRRLFCEPHWRGLLYEGDESIGMDIDTKEDYERAVIYREVKEGHSRGRR
Specific function: Required for xanthine dehydrogenase activity. Could be involved in formation of the molybdenum cofactor required by xanthine dehydrogenase [H]
COG id: COG2068
COG function: function code R; Uncharacterized MobA-related protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017615 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23250; Mature: 23119
Theoretical pI: Translated: 7.53; Mature: 7.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSELTIAGIYLAAGQSRRMGTDKRALPWGDGTLGTAGLKAALHSCLSPIIVVVPPTDALV CCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCEE WLPDALLNHDKCRLVRCAACHRGQAHSLACGLQETIVVGADAAAVLLADQPFVTTETIDA ECCHHHHCCCHHHHHHHHHHCCCCCHHHHCCCHHEEEECCCCEEEEEECCCCCHHHHHHH LARFYRQHHPDYAAFSRFGTPMPPVIWGKQMFPALLALRGDAGGRRLFCEPHWRGLLYEG HHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEEC DESIGMDIDTKEDYERAVIYREVKEGHSRGRR CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SELTIAGIYLAAGQSRRMGTDKRALPWGDGTLGTAGLKAALHSCLSPIIVVVPPTDALV CCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCEE WLPDALLNHDKCRLVRCAACHRGQAHSLACGLQETIVVGADAAAVLLADQPFVTTETIDA ECCHHHHCCCHHHHHHHHHHCCCCCHHHHCCCHHEEEECCCCEEEEEECCCCCHHHHHHH LARFYRQHHPDYAAFSRFGTPMPPVIWGKQMFPALLALRGDAGGRRLFCEPHWRGLLYEG HHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEEC DESIGMDIDTKEDYERAVIYREVKEGHSRGRR CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377; 11344136 [H]