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The map label for this gene is yerB [H]

Identifier: 138893927

GI number: 138893927

Start: 280293

End: 281312

Strand: Direct

Name: yerB [H]

Synonym: GTNG_0251

Alternate gene names: 138893927

Gene position: 280293-281312 (Clockwise)

Preceding gene: 138893926

Following gene: 138893928

Centisome position: 7.89

GC content: 53.33

Gene sequence:

>1020_bases
GTGTGTCCATTGAAACATTGGCTGTTTGTCATCAGTTGCGCAGTGCTGTTACTAGGCGGCTGCACCGCCAAAAGCGAGCC
GAAACCAACTGAACCGGCCAAGCCGAGTCCGGAGCAGCCATCCGAGTCTCCGGCAGAGGAGAAACAAATGTTTCCGCTGA
CCGGATTGCCAACGGAAGGAGATATCGATCAGCGGGTCGTCAGCGTGATGATCAACAACCATCCGAAGGCGCGTCCGCAG
TCAGGCCTCCATCAGGCCGATATCGTATATGAGGTACTTGCCGAGGGGGACATCACCCGCTTTTTAGCGCTGTATCAAAG
CGAGTTGCCTGAACGGGTTGGGCCGGTGCGGAGTGCACGTGAGTATTATATTGACTTGAGCGACGGCTACCATGCGCTTT
ACGTCTGCCACGGCTGGAGCCCGGAGGCAAAAACGCGGCTCGAGCAGGGGAACACCGATTATTTGAACGGGCTGTTTTAC
GACGGAACACTGTTTCAGCGCGTCTCATTCCGCAAGGCGCCGCACAACTCATACATTACATTTGCCAACATTGAAAAAGG
GGCCGAACAAAACGGATACGTATGGACAGATGATATTGACCCACTGCTGTTTCGCGACGATGAGCCGAGCGGAGAGCAGG
TCGAGACGGTTCGTATTACCTATTCACATCGTGCGTATGCCCAAGTGGAATACCGATATGCACCGGAACAAAAAGGGTAT
TACCGATACAGCGGTGGTGAGCAAACGGTGGATTACGATACACATGAACCCGTCGTGGTGCAAAACGTTATGATCATCGC
CGCTCGCCATCAAGTGATCGACAGCTACGGACGACGTGACATTGATTTCACTTCCGGTGGTCAGGGCTACTTGTTACAAA
ACGGCGTTATGCAGCCGATCGAATGGAAAAACGTCGATGGTCGGCTGTTGCCGTACCGCGACGGGGTTCCGGTCGGATTC
GTGCCAGGAAAGACATGGATTAACATCGTTCCCGAACTGACGATTGTGGAATCAAAATAA

Upstream 100 bases:

>100_bases
TTGCCATACGTGCGCATCACCCAGCGCGGCATTTATGATGTCATGCACAAAACGGTACTCTTTCCTTCGATAATGCGGTA
AAATAAAAAAGGAAAAGGTT

Downstream 100 bases:

>100_bases
CAAAAAGTTGGATCAGACTGAAAACAATGGGCGAGGAACACGTCCTGAGTCGGCTTTCGGTGAAAGAGACACGGCCGCCC
GACGGAGGGGACGTCCTCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MCPLKHWLFVISCAVLLLGGCTAKSEPKPTEPAKPSPEQPSESPAEEKQMFPLTGLPTEGDIDQRVVSVMINNHPKARPQ
SGLHQADIVYEVLAEGDITRFLALYQSELPERVGPVRSAREYYIDLSDGYHALYVCHGWSPEAKTRLEQGNTDYLNGLFY
DGTLFQRVSFRKAPHNSYITFANIEKGAEQNGYVWTDDIDPLLFRDDEPSGEQVETVRITYSHRAYAQVEYRYAPEQKGY
YRYSGGEQTVDYDTHEPVVVQNVMIIAARHQVIDSYGRRDIDFTSGGQGYLLQNGVMQPIEWKNVDGRLLPYRDGVPVGF
VPGKTWINIVPELTIVESK

Sequences:

>Translated_339_residues
MCPLKHWLFVISCAVLLLGGCTAKSEPKPTEPAKPSPEQPSESPAEEKQMFPLTGLPTEGDIDQRVVSVMINNHPKARPQ
SGLHQADIVYEVLAEGDITRFLALYQSELPERVGPVRSAREYYIDLSDGYHALYVCHGWSPEAKTRLEQGNTDYLNGLFY
DGTLFQRVSFRKAPHNSYITFANIEKGAEQNGYVWTDDIDPLLFRDDEPSGEQVETVRITYSHRAYAQVEYRYAPEQKGY
YRYSGGEQTVDYDTHEPVVVQNVMIIAARHQVIDSYGRRDIDFTSGGQGYLLQNGVMQPIEWKNVDGRLLPYRDGVPVGF
VPGKTWINIVPELTIVESK
>Mature_339_residues
MCPLKHWLFVISCAVLLLGGCTAKSEPKPTEPAKPSPEQPSESPAEEKQMFPLTGLPTEGDIDQRVVSVMINNHPKARPQ
SGLHQADIVYEVLAEGDITRFLALYQSELPERVGPVRSAREYYIDLSDGYHALYVCHGWSPEAKTRLEQGNTDYLNGLFY
DGTLFQRVSFRKAPHNSYITFANIEKGAEQNGYVWTDDIDPLLFRDDEPSGEQVETVRITYSHRAYAQVEYRYAPEQKGY
YRYSGGEQTVDYDTHEPVVVQNVMIIAARHQVIDSYGRRDIDFTSGGQGYLLQNGVMQPIEWKNVDGRLLPYRDGVPVGF
VPGKTWINIVPELTIVESK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021416
- InterPro:   IPR023158 [H]

Pfam domain/function: PF11258 DUF3048 [H]

EC number: NA

Molecular weight: Translated: 38338; Mature: 38338

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCPLKHWLFVISCAVLLLGGCTAKSEPKPTEPAKPSPEQPSESPAEEKQMFPLTGLPTEG
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCC
DIDQRVVSVMINNHPKARPQSGLHQADIVYEVLAEGDITRFLALYQSELPERVGPVRSAR
CHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHCCC
EYYIDLSDGYHALYVCHGWSPEAKTRLEQGNTDYLNGLFYDGTLFQRVSFRKAPHNSYIT
EEEEECCCCEEEEEEEECCCCHHHHHHHCCCCHHHCCEEECCHHHHHHHHHCCCCCCEEE
FANIEKGAEQNGYVWTDDIDPLLFRDDEPSGEQVETVRITYSHRAYAQVEYRYAPEQKGY
EEECCCCCCCCCEEEECCCCCEEEECCCCCCCEEEEEEEEECCCEEEEEEEEECCCCCCE
YRYSGGEQTVDYDTHEPVVVQNVMIIAARHQVIDSYGRRDIDFTSGGQGYLLQNGVMQPI
EEECCCCEEECCCCCCCEEEHHEEEEHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCC
EWKNVDGRLLPYRDGVPVGFVPGKTWINIVPELTIVESK
EECCCCCEEEECCCCCCEEEECCCHHEEECCCEEEEECC
>Mature Secondary Structure
MCPLKHWLFVISCAVLLLGGCTAKSEPKPTEPAKPSPEQPSESPAEEKQMFPLTGLPTEG
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCC
DIDQRVVSVMINNHPKARPQSGLHQADIVYEVLAEGDITRFLALYQSELPERVGPVRSAR
CHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHCCC
EYYIDLSDGYHALYVCHGWSPEAKTRLEQGNTDYLNGLFYDGTLFQRVSFRKAPHNSYIT
EEEEECCCCEEEEEEEECCCCHHHHHHHCCCCHHHCCEEECCHHHHHHHHHCCCCCCEEE
FANIEKGAEQNGYVWTDDIDPLLFRDDEPSGEQVETVRITYSHRAYAQVEYRYAPEQKGY
EEECCCCCCCCCEEEECCCCCEEEECCCCCCCEEEEEEEEECCCEEEEEEEEECCCCCCE
YRYSGGEQTVDYDTHEPVVVQNVMIIAARHQVIDSYGRRDIDFTSGGQGYLLQNGVMQPI
EEECCCCEEECCCCCCCEEEHHEEEEHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCC
EWKNVDGRLLPYRDGVPVGFVPGKTWINIVPELTIVESK
EECCCCCEEEECCCCCCEEEECCCHHEEECCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969499; 9701819; 9384377 [H]