Click here to switch to the map view.

The map label for this gene is yjoA [H]

Identifier: 138893857

GI number: 138893857

Start: 194395

End: 194859

Strand: Reverse

Name: yjoA [H]

Synonym: GTNG_0181

Alternate gene names: 138893857

Gene position: 194859-194395 (Counterclockwise)

Preceding gene: 138893858

Following gene: 138893855

Centisome position: 5.49

GC content: 48.6

Gene sequence:

>465_bases
ATGCCCCGCGCACAACAATGGGTGCAATATTTCCTTTCCCACCGTCATGTCACGATGGAACTGATCAACAAAATCGATGA
GGCACATTACGACTTCAAACCGACACCGACGTCGATGACAGCGAAGCAGCTGGCGACTCATATGGTGTTCAGCTTTTACA
ACTTTGCCAACGTCGCCAAACACGGGGATCCAGCGCTGTTCCAGCCAAAAATGGAGGATCCAGAGACGAATTTGGCCAAG
CTGGCGGAAACGTATACAGAAAAAACGAAACAGTTGCTAGAATCAATGAGTGATGAGGAATTCAATCGCACAATCGATTT
AACTGCCATCTTCGGAGTTCAAATGTCAGCAAAGCAGCTTTTGCAGATGGCGATGGACCATGAAATCCATCATAAAGGGC
AGCTGTTCGTCTACGTGCGCGAGATGGGACATACGGACTTGCCGCTGTTTGTAAAGCGCGGCTAA

Upstream 100 bases:

>100_bases
CAAGGGACTACCTTTCTAGTCAAGCTTCCTCGCTGACGATAAAGAGGACGTTTATGGTAGAATGGAAAACAGGAATCCAT
AACCAAAAGGAGGAATCGCT

Downstream 100 bases:

>100_bases
CCTTCTTCACCTCCTCTTACGAAAAAAACCGGCTAGCAGAGTCTAGCCGGTTTTTCGTTTGCTTGACAAACGGGTTAGTC
GATCGAGCAGTTTCCGTCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 153

Protein sequence:

>154_residues
MPRAQQWVQYFLSHRHVTMELINKIDEAHYDFKPTPTSMTAKQLATHMVFSFYNFANVAKHGDPALFQPKMEDPETNLAK
LAETYTEKTKQLLESMSDEEFNRTIDLTAIFGVQMSAKQLLQMAMDHEIHHKGQLFVYVREMGHTDLPLFVKRG

Sequences:

>Translated_154_residues
MPRAQQWVQYFLSHRHVTMELINKIDEAHYDFKPTPTSMTAKQLATHMVFSFYNFANVAKHGDPALFQPKMEDPETNLAK
LAETYTEKTKQLLESMSDEEFNRTIDLTAIFGVQMSAKQLLQMAMDHEIHHKGQLFVYVREMGHTDLPLFVKRG
>Mature_153_residues
PRAQQWVQYFLSHRHVTMELINKIDEAHYDFKPTPTSMTAKQLATHMVFSFYNFANVAKHGDPALFQPKMEDPETNLAKL
AETYTEKTKQLLESMSDEEFNRTIDLTAIFGVQMSAKQLLQMAMDHEIHHKGQLFVYVREMGHTDLPLFVKRG

Specific function: Unknown

COG id: COG2318

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dinB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007837 [H]

Pfam domain/function: PF05163 DinB [H]

EC number: NA

Molecular weight: Translated: 17919; Mature: 17788

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.5 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRAQQWVQYFLSHRHVTMELINKIDEAHYDFKPTPTSMTAKQLATHMVFSFYNFANVAK
CCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
HGDPALFQPKMEDPETNLAKLAETYTEKTKQLLESMSDEEFNRTIDLTAIFGVQMSAKQL
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCEEEHHHHHCCHHHHHHH
LQMAMDHEIHHKGQLFVYVREMGHTDLPLFVKRG
HHHHHHHHHCCCCCEEEEEECCCCCCCCEEEECC
>Mature Secondary Structure 
PRAQQWVQYFLSHRHVTMELINKIDEAHYDFKPTPTSMTAKQLATHMVFSFYNFANVAK
CCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
HGDPALFQPKMEDPETNLAKLAETYTEKTKQLLESMSDEEFNRTIDLTAIFGVQMSAKQL
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCEEEHHHHHCCHHHHHHH
LQMAMDHEIHHKGQLFVYVREMGHTDLPLFVKRG
HHHHHHHHHCCCCCEEEEEECCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9579062; 9384377 [H]