Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
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Accession | NC_009091 |
Length | 1,641,879 |
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The map label for this gene is 126696784
Identifier: 126696784
GI number: 126696784
Start: 1216587
End: 1218857
Strand: Reverse
Name: 126696784
Synonym: P9301_14461
Alternate gene names: NA
Gene position: 1218857-1216587 (Counterclockwise)
Preceding gene: 126696785
Following gene: 126696781
Centisome position: 74.24
GC content: 27.08
Gene sequence:
>2271_bases TTGAATAAGTTAAAATTAAGAAATTTTTTAATCTATTTACCTGGAATATTTATAATTAATTGTTTAAATTTATACTCTAA TTTTGCAATAGCAGAATCCCTCAATAAGAAATATAATACAGAATTCGATTTAAAAAAAAATACTTTAAAACATAATTCTA ATAACTCTAAAATTGAAGATAAATTTTTAAGTGATTTAAAAAAAAACGGGGGTACACTTTTTAATCTTCTAGCACTTGAT GATAATGATACTGCAGAAAAACAAGAGAATGCTGATTTAACAGACTCCTTAAATAAGTCAAATATTCAGGAAAAGTTTCT TGTTGAAATTGAAGCAGATAATAAATACAGAAAAAATAATATTTTTTATGCTGAAGGGAATCCAATAATATATTTTTCTA ACGCAACTTTAGGAGGAAATTTAGTTACTTACGATATAGAAAACAGAGTTTTAACAGTAATAGGTAATGTCACTTTCAAA AGGGGGTCTCAATTTTTTAATTCTGAAAAACTTTTTTATGATCTTAAAAATGATAAAGGATATATTGATGATATTTATGG GGTTTTAGATAGTAAAACTTTTGAAGAAGACTTTAAGATTGAATTAGATGATAAAAATAGAAAATTTATTAATGAAAATG ATAATTTCGACATTACCGAATTAAAAAAAGTAAGTAGTGCAAATATAGGCTTTGTAAATGATTTCGAGGATAACAAGAGT CTCAATATAACAAAACTAAACCTTAGTATTCCTGGTATAACTAGATGGAGATATAAAGCAGATAAGTTATTCTTTGATTC AGAATCTTTTTCTTCAGACAAGATATTTTTTACAAACGATGTTTATAATTATCCACAAATTCTGTTTAAGAGTTATGGAT TTACTGCTGAAATAGTAGAAGATAAATTAAGATTGATTAGTAGAAATACTTGGATAGATTTAGATAATAAATTCAAGTTT CCAATTGGAAGAACTTCAATCTTTGATAGAGATCCAATCACTCAATGGGGGCTTGGCGCAGATTTTGCTGAGAAAGATGG ATATTATGTTTTTAGAGGTAGTAAATCAAGAAATTTATTTGGTAACTTTTCTTTTAAATTGCAACCATATTACTTAGTCC AAAGAGCTATAAAAGGTAAAACAAAATCATATACAGCTAAAAATACATCTGTCTTTAGTGGAAAAGTCGAAAGTGATGCT ACAACGATGGATTATTTTGCTCTAGATGTTAACACTAAAGGCAAAATCAATGAATGGGATGTAAATTCTTTACTTAGTCT GAATAGCCTTAATTTAGATAGGCTTGATGAATCTTTTAGATCCAAATTTACCCTAAAAAAAAGAATTGATTTAAATCAAG ATAAGGAATCTAACGAAGTTGGTCAAAATCTTATTCCATTAGAAATTGGCCTGTTAAATGAAGGCAATAATTCAATTTCA CGTTTTGATGAAGAAATTTATTTTAATTCAGAAAATAATTCGTCCGAGAATCAAAATCAGTACGATTTTAACAATTTTCT AGATTTACAGTTTTACAATGTTTTTAGGGAGAAAGTTAAAAAGGACTTTGCTACAGAGGAGATATATTTCGCAAGTGGTT TTAATATAAGTAATAAAAAGTCATGGCTAATTAATAAAAAGAAGACAAATTTGTCTTTAATTTATGATTTTGGACATTTT AAATCAAAAAGCAGGACTAAAAATGAGTTTAAAGAGTTATTTCGAAATTCTTTTGTAGCGCAATACAATCACAAATTACC ATTGTGGGAAAGTAGTCCTCTCGATAAAACTATAGATAAAACATATAAGTTTTCACCTACTGTCATAAGAAAAGCGGTAG ATTGGGAAACTGGACTTCAGACAGGATTATTCTTTTATAGTGATGATTCAAGTCAGATTGCTTCAAAATTTACTACCGGT CCATCTATTACATTAGGCAACTTAAAAAACAATCTTTTGGATTATACATATGTTAAGGCTAACTTTAACTATGTCTTAAA AGAGGGTGATAGCCCTTTCAGCTTCGACAATATAAGTAAAAATCCAAATGTGAAGATTAGTTTAGAACAGCAAATATTTG GCCCTTTAATTTTTAGCTATGAAACAACTTTGAATCTAGATAATGGTAAATATTCTAATCCAAATTATGGATTAAATATT AATAGAAGAGCATATTCAATTGGTGCTTTTTATAATTCCTCAGAGGAAAGTTTAGGAATTAAATTTAATATATTTAACTT TGATTACTCGGGATTGAGTTCAAAGTTTTAA
Upstream 100 bases:
>100_bases GATTCAAGGAAAGTTACTTGCTGTATGGAGAAAAATGTAATTTTTTATTTAAGAAGAATCGATCATTTAACGTATAATAA ATATAAAATCTCTGAAAATA
Downstream 100 bases:
>100_bases TTCAACTTATTTCACTATTTTTAAAATAGAAATATCTCCTTAATTTTTGTGAACATTTAGTTTTTAAAATTTCTTCTAAA TTCTTCAATAGTCATTCTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 756; Mature: 756
Protein sequence:
>756_residues MNKLKLRNFLIYLPGIFIINCLNLYSNFAIAESLNKKYNTEFDLKKNTLKHNSNNSKIEDKFLSDLKKNGGTLFNLLALD DNDTAEKQENADLTDSLNKSNIQEKFLVEIEADNKYRKNNIFYAEGNPIIYFSNATLGGNLVTYDIENRVLTVIGNVTFK RGSQFFNSEKLFYDLKNDKGYIDDIYGVLDSKTFEEDFKIELDDKNRKFINENDNFDITELKKVSSANIGFVNDFEDNKS LNITKLNLSIPGITRWRYKADKLFFDSESFSSDKIFFTNDVYNYPQILFKSYGFTAEIVEDKLRLISRNTWIDLDNKFKF PIGRTSIFDRDPITQWGLGADFAEKDGYYVFRGSKSRNLFGNFSFKLQPYYLVQRAIKGKTKSYTAKNTSVFSGKVESDA TTMDYFALDVNTKGKINEWDVNSLLSLNSLNLDRLDESFRSKFTLKKRIDLNQDKESNEVGQNLIPLEIGLLNEGNNSIS RFDEEIYFNSENNSSENQNQYDFNNFLDLQFYNVFREKVKKDFATEEIYFASGFNISNKKSWLINKKKTNLSLIYDFGHF KSKSRTKNEFKELFRNSFVAQYNHKLPLWESSPLDKTIDKTYKFSPTVIRKAVDWETGLQTGLFFYSDDSSQIASKFTTG PSITLGNLKNNLLDYTYVKANFNYVLKEGDSPFSFDNISKNPNVKISLEQQIFGPLIFSYETTLNLDNGKYSNPNYGLNI NRRAYSIGAFYNSSEESLGIKFNIFNFDYSGLSSKF
Sequences:
>Translated_756_residues MNKLKLRNFLIYLPGIFIINCLNLYSNFAIAESLNKKYNTEFDLKKNTLKHNSNNSKIEDKFLSDLKKNGGTLFNLLALD DNDTAEKQENADLTDSLNKSNIQEKFLVEIEADNKYRKNNIFYAEGNPIIYFSNATLGGNLVTYDIENRVLTVIGNVTFK RGSQFFNSEKLFYDLKNDKGYIDDIYGVLDSKTFEEDFKIELDDKNRKFINENDNFDITELKKVSSANIGFVNDFEDNKS LNITKLNLSIPGITRWRYKADKLFFDSESFSSDKIFFTNDVYNYPQILFKSYGFTAEIVEDKLRLISRNTWIDLDNKFKF PIGRTSIFDRDPITQWGLGADFAEKDGYYVFRGSKSRNLFGNFSFKLQPYYLVQRAIKGKTKSYTAKNTSVFSGKVESDA TTMDYFALDVNTKGKINEWDVNSLLSLNSLNLDRLDESFRSKFTLKKRIDLNQDKESNEVGQNLIPLEIGLLNEGNNSIS RFDEEIYFNSENNSSENQNQYDFNNFLDLQFYNVFREKVKKDFATEEIYFASGFNISNKKSWLINKKKTNLSLIYDFGHF KSKSRTKNEFKELFRNSFVAQYNHKLPLWESSPLDKTIDKTYKFSPTVIRKAVDWETGLQTGLFFYSDDSSQIASKFTTG PSITLGNLKNNLLDYTYVKANFNYVLKEGDSPFSFDNISKNPNVKISLEQQIFGPLIFSYETTLNLDNGKYSNPNYGLNI NRRAYSIGAFYNSSEESLGIKFNIFNFDYSGLSSKF >Mature_756_residues MNKLKLRNFLIYLPGIFIINCLNLYSNFAIAESLNKKYNTEFDLKKNTLKHNSNNSKIEDKFLSDLKKNGGTLFNLLALD DNDTAEKQENADLTDSLNKSNIQEKFLVEIEADNKYRKNNIFYAEGNPIIYFSNATLGGNLVTYDIENRVLTVIGNVTFK RGSQFFNSEKLFYDLKNDKGYIDDIYGVLDSKTFEEDFKIELDDKNRKFINENDNFDITELKKVSSANIGFVNDFEDNKS LNITKLNLSIPGITRWRYKADKLFFDSESFSSDKIFFTNDVYNYPQILFKSYGFTAEIVEDKLRLISRNTWIDLDNKFKF PIGRTSIFDRDPITQWGLGADFAEKDGYYVFRGSKSRNLFGNFSFKLQPYYLVQRAIKGKTKSYTAKNTSVFSGKVESDA TTMDYFALDVNTKGKINEWDVNSLLSLNSLNLDRLDESFRSKFTLKKRIDLNQDKESNEVGQNLIPLEIGLLNEGNNSIS RFDEEIYFNSENNSSENQNQYDFNNFLDLQFYNVFREKVKKDFATEEIYFASGFNISNKKSWLINKKKTNLSLIYDFGHF KSKSRTKNEFKELFRNSFVAQYNHKLPLWESSPLDKTIDKTYKFSPTVIRKAVDWETGLQTGLFFYSDDSSQIASKFTTG PSITLGNLKNNLLDYTYVKANFNYVLKEGDSPFSFDNISKNPNVKISLEQQIFGPLIFSYETTLNLDNGKYSNPNYGLNI NRRAYSIGAFYNSSEESLGIKFNIFNFDYSGLSSKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 87542; Mature: 87542
Theoretical pI: Translated: 6.85; Mature: 6.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKLKLRNFLIYLPGIFIINCLNLYSNFAIAESLNKKYNTEFDLKKNTLKHNSNNSKIED CCCCEEEHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECEEHHHHCCCCCCCCHHH KFLSDLKKNGGTLFNLLALDDNDTAEKQENADLTDSLNKSNIQEKFLVEIEADNKYRKNN HHHHHHHHCCCEEEEEEEECCCCCCCHHCCCCHHHCCCCCCCCEEEEEEEECCCCEECCE IFYAEGNPIIYFSNATLGGNLVTYDIENRVLTVIGNVTFKRGSQFFNSEKLFYDLKNDKG EEEECCCEEEEECCCCCCCCEEEEECCCCEEEEEECEEEECCCHHCCCCEEEEEECCCCC YIDDIYGVLDSKTFEEDFKIELDDKNRKFINENDNFDITELKKVSSANIGFVNDFEDNKS CHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCEEECCCCCCC LNITKLNLSIPGITRWRYKADKLFFDSESFSSDKIFFTNDVYNYPQILFKSYGFTAEIVE EEEEEEEEECCCCEEEEEECCEEEECCCCCCCCEEEEECCCCCCHHHHHHHCCCCHHHHH DKLRLISRNTWIDLDNKFKFPIGRTSIFDRDPITQWGLGADFAEKDGYYVFRGSKSRNLF HHHHHHHCCCEEECCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEE GNFSFKLQPYYLVQRAIKGKTKSYTAKNTSVFSGKVESDATTMDYFALDVNTKGKINEWD EEEEEEECHHHHHHHHHCCCCCCEECCCCEEEECCCCCCCEEEEEEEEEECCCCCCCCCC VNSLLSLNSLNLDRLDESFRSKFTLKKRIDLNQDKESNEVGQNLIPLEIGLLNEGNNSIS CHHHEEECCCCHHHHHHHHHHHEEEEEECCCCCCCCCHHHCCCEEEEEEEEEECCCCHHH RFDEEIYFNSENNSSENQNQYDFNNFLDLQFYNVFREKVKKDFATEEIYFASGFNISNKK HCCCEEEECCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCC SWLINKKKTNLSLIYDFGHFKSKSRTKNEFKELFRNSFVAQYNHKLPLWESSPLDKTIDK EEEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCHHHHCCCCCCCCCCCCCHHHHH TYKFSPTVIRKAVDWETGLQTGLFFYSDDSSQIASKFTTGPSITLGNLKNNLLDYTYVKA HCCCCHHHHHHHHCHHCCCCCCEEEEECCHHHHHHHHCCCCCEEECCHHCCCEEEEEEEE NFNYVLKEGDSPFSFDNISKNPNVKISLEQQIFGPLIFSYETTLNLDNGKYSNPNYGLNI CCEEEEECCCCCCCCCCCCCCCCEEEEEHHHHCCCEEEEEEEEEEECCCCCCCCCCCEEE NRRAYSIGAFYNSSEESLGIKFNIFNFDYSGLSSKF CCEEEEEEEEECCCCCCCEEEEEEEEEECCCCCCCC >Mature Secondary Structure MNKLKLRNFLIYLPGIFIINCLNLYSNFAIAESLNKKYNTEFDLKKNTLKHNSNNSKIED CCCCEEEHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECEEHHHHCCCCCCCCHHH KFLSDLKKNGGTLFNLLALDDNDTAEKQENADLTDSLNKSNIQEKFLVEIEADNKYRKNN HHHHHHHHCCCEEEEEEEECCCCCCCHHCCCCHHHCCCCCCCCEEEEEEEECCCCEECCE IFYAEGNPIIYFSNATLGGNLVTYDIENRVLTVIGNVTFKRGSQFFNSEKLFYDLKNDKG EEEECCCEEEEECCCCCCCCEEEEECCCCEEEEEECEEEECCCHHCCCCEEEEEECCCCC YIDDIYGVLDSKTFEEDFKIELDDKNRKFINENDNFDITELKKVSSANIGFVNDFEDNKS CHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCEEECCCCCCC LNITKLNLSIPGITRWRYKADKLFFDSESFSSDKIFFTNDVYNYPQILFKSYGFTAEIVE EEEEEEEEECCCCEEEEEECCEEEECCCCCCCCEEEEECCCCCCHHHHHHHCCCCHHHHH DKLRLISRNTWIDLDNKFKFPIGRTSIFDRDPITQWGLGADFAEKDGYYVFRGSKSRNLF HHHHHHHCCCEEECCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEE GNFSFKLQPYYLVQRAIKGKTKSYTAKNTSVFSGKVESDATTMDYFALDVNTKGKINEWD EEEEEEECHHHHHHHHHCCCCCCEECCCCEEEECCCCCCCEEEEEEEEEECCCCCCCCCC VNSLLSLNSLNLDRLDESFRSKFTLKKRIDLNQDKESNEVGQNLIPLEIGLLNEGNNSIS CHHHEEECCCCHHHHHHHHHHHEEEEEECCCCCCCCCHHHCCCEEEEEEEEEECCCCHHH RFDEEIYFNSENNSSENQNQYDFNNFLDLQFYNVFREKVKKDFATEEIYFASGFNISNKK HCCCEEEECCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCC SWLINKKKTNLSLIYDFGHFKSKSRTKNEFKELFRNSFVAQYNHKLPLWESSPLDKTIDK EEEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCHHHHCCCCCCCCCCCCCHHHHH TYKFSPTVIRKAVDWETGLQTGLFFYSDDSSQIASKFTTGPSITLGNLKNNLLDYTYVKA HCCCCHHHHHHHHCHHCCCCCCEEEEECCHHHHHHHHCCCCCEEECCHHCCCEEEEEEEE NFNYVLKEGDSPFSFDNISKNPNVKISLEQQIFGPLIFSYETTLNLDNGKYSNPNYGLNI CCEEEEECCCCCCCCCCCCCCCCEEEEEHHHHCCCEEEEEEEEEEECCCCCCCCCCCEEE NRRAYSIGAFYNSSEESLGIKFNIFNFDYSGLSSKF CCEEEEEEEEECCCCCCCEEEEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA