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The map label for this gene is todF [H]

Identifier: 126696531

GI number: 126696531

Start: 1006404

End: 1007303

Strand: Reverse

Name: todF [H]

Synonym: P9301_11931

Alternate gene names: 126696531

Gene position: 1007303-1006404 (Counterclockwise)

Preceding gene: 126696532

Following gene: 126696528

Centisome position: 61.35

GC content: 33.11

Gene sequence:

>900_bases
TTGACTAAAAACAATTTTGAACAATTAAGTGATGTAAATATAGAATTTTTTGAAAGTGCCAAATTGTCACTACTAGACCC
CTTAGGTCTTTATTTGGCAAATGATGTTGAGTGGATAAAATTTAACCAAAACTGGAACTCCTTAAAATTCCCAGTAGTTA
TGGGAGGAAAAGGTCAACCTATACTTCTTCTACATGGCTTTGATAGTAGTTTTTTAGAATTCAGAAGAATATATAAATCA
CTAAAAAGAAATTTTCAAGTTATCGTTCCTGATCTGCTGGGTTTTGGTTTTAGTCCCAGGTGCGCAACAAATGAATATAA
TTCCTCGAAAATAATTGCGCATTTAATTGATCTCCTTAAGACCTTAAACATAACAAAGAATCTAAAAATTATTGGTGCCT
CTATGGGAGGCTCAACAGCTTTAAAACTTGCTTATGAAATTCCTGATTCTATTGATAAAATTATCCTTTTGTCCCCCGCC
GGATTGTTTGGAGACCCTAAGAGTATTCCTTTCCCTTTTAACCAAATTGGCGCCTCATTTCTTGGATTGCCTCAGGTCAG
AAAAAGTCTTTGTAGGCAAGCATTTGCTTTCCCAAATGAATGCGTTGGTAAGATGGAAGAGCAAATTGCTTCAATTCATT
TAGGTTGTAAAGGATGGAGAAATTCACTCGCATCATTTGCAAAAAGTGGTGGTTTTGCAGGCACTCAAAAATATATCCAA
AATATCCCAATCAAAACATTATGTGGAGAAAATGATCGAATTCTTGGAAAAAAAGAGCTTATAAAAATAGGAAATATTGA
AAAATTAAATTTTGTAGGGTTACAAAATTGTGGTCATCTTCCACATATAGATCTTCCATCATTATCTAGCAAAATTATCA
AAGATTATTTTTTGGAATAA

Upstream 100 bases:

>100_bases
AATCTGAGATTCACTTTTTGCCTTTTGAAATTAGTAAAGGGGAAATAATAGAAGTTATTACAAATTTTGAAAAACAAAAA
ATTAAAACATAAATATTTTT

Downstream 100 bases:

>100_bases
AATTTTTCTTAATTAATTTAGATATTTGAGAATTATAAAAAAGTAATACAAAACAGATGGAGTAAAGATGTAACTGTCAA
TTCTGTCAAGAATCCCTCCA

Product: Alpha/beta hydrolase fold

Products: NA

Alternate protein names: HMSH [H]

Number of amino acids: Translated: 299; Mature: 298

Protein sequence:

>299_residues
MTKNNFEQLSDVNIEFFESAKLSLLDPLGLYLANDVEWIKFNQNWNSLKFPVVMGGKGQPILLLHGFDSSFLEFRRIYKS
LKRNFQVIVPDLLGFGFSPRCATNEYNSSKIIAHLIDLLKTLNITKNLKIIGASMGGSTALKLAYEIPDSIDKIILLSPA
GLFGDPKSIPFPFNQIGASFLGLPQVRKSLCRQAFAFPNECVGKMEEQIASIHLGCKGWRNSLASFAKSGGFAGTQKYIQ
NIPIKTLCGENDRILGKKELIKIGNIEKLNFVGLQNCGHLPHIDLPSLSSKIIKDYFLE

Sequences:

>Translated_299_residues
MTKNNFEQLSDVNIEFFESAKLSLLDPLGLYLANDVEWIKFNQNWNSLKFPVVMGGKGQPILLLHGFDSSFLEFRRIYKS
LKRNFQVIVPDLLGFGFSPRCATNEYNSSKIIAHLIDLLKTLNITKNLKIIGASMGGSTALKLAYEIPDSIDKIILLSPA
GLFGDPKSIPFPFNQIGASFLGLPQVRKSLCRQAFAFPNECVGKMEEQIASIHLGCKGWRNSLASFAKSGGFAGTQKYIQ
NIPIKTLCGENDRILGKKELIKIGNIEKLNFVGLQNCGHLPHIDLPSLSSKIIKDYFLE
>Mature_298_residues
TKNNFEQLSDVNIEFFESAKLSLLDPLGLYLANDVEWIKFNQNWNSLKFPVVMGGKGQPILLLHGFDSSFLEFRRIYKSL
KRNFQVIVPDLLGFGFSPRCATNEYNSSKIIAHLIDLLKTLNITKNLKIIGASMGGSTALKLAYEIPDSIDKIILLSPAG
LFGDPKSIPFPFNQIGASFLGLPQVRKSLCRQAFAFPNECVGKMEEQIASIHLGCKGWRNSLASFAKSGGFAGTQKYIQN
IPIKTLCGENDRILGKKELIKIGNIEKLNFVGLQNCGHLPHIDLPSLSSKIIKDYFLE

Specific function: Conversion of 2-hydroxymuconic acid semialdehyde to 2- hydroxypent-2,4-dienoate [H]

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dmpD/todF/xylF esterase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR000639 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 33272; Mature: 33141

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKNNFEQLSDVNIEFFESAKLSLLDPLGLYLANDVEWIKFNQNWNSLKFPVVMGGKGQP
CCCCCHHHHHCCCEEEECCCCHHHHCHHHHHHCCCEEEEEECCCCCCEEEEEEECCCCCE
ILLLHGFDSSFLEFRRIYKSLKRNFQVIVPDLLGFGFSPRCATNEYNSSKIIAHLIDLLK
EEEEECCCHHHHHHHHHHHHHHCCCEEEEHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH
TLNITKNLKIIGASMGGSTALKLAYEIPDSIDKIILLSPAGLFGDPKSIPFPFNQIGASF
HHCCCCCEEEEEECCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHH
LGLPQVRKSLCRQAFAFPNECVGKMEEQIASIHLGCKGWRNSLASFAKSGGFAGTQKYIQ
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHH
NIPIKTLCGENDRILGKKELIKIGNIEKLNFVGLQNCGHLPHIDLPSLSSKIIKDYFLE
HCCCCEECCCCCCCCCHHHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
TKNNFEQLSDVNIEFFESAKLSLLDPLGLYLANDVEWIKFNQNWNSLKFPVVMGGKGQP
CCCCHHHHHCCCEEEECCCCHHHHCHHHHHHCCCEEEEEECCCCCCEEEEEEECCCCCE
ILLLHGFDSSFLEFRRIYKSLKRNFQVIVPDLLGFGFSPRCATNEYNSSKIIAHLIDLLK
EEEEECCCHHHHHHHHHHHHHHCCCEEEEHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH
TLNITKNLKIIGASMGGSTALKLAYEIPDSIDKIILLSPAGLFGDPKSIPFPFNQIGASF
HHCCCCCEEEEEECCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHH
LGLPQVRKSLCRQAFAFPNECVGKMEEQIASIHLGCKGWRNSLASFAKSGGFAGTQKYIQ
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHH
NIPIKTLCGENDRILGKKELIKIGNIEKLNFVGLQNCGHLPHIDLPSLSSKIIKDYFLE
HCCCCEECCCCCCCCCHHHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2194577 [H]