Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
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Accession | NC_009091 |
Length | 1,641,879 |
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The map label for this gene is 126696509
Identifier: 126696509
GI number: 126696509
Start: 982645
End: 984228
Strand: Reverse
Name: 126696509
Synonym: P9301_11711
Alternate gene names: NA
Gene position: 984228-982645 (Counterclockwise)
Preceding gene: 126696512
Following gene: 126696506
Centisome position: 59.95
GC content: 34.47
Gene sequence:
>1584_bases ATGAATGGGCGATACCCCCCAAAAAATGTTTTAGGTCAGTTAGCGATAGTTTTACATGCTCATCTACCTTATGTCAGAAA AAATGAAATAAACTCCTTAGAAGAGGATTGGTTATTTCAGGCGATTCTGGAATGTTATATACCGCTACTTCAATCAATAG AATCTTCCAAAAAAGAAAATCCTGAAAATACAAAGCTTACTATTAGTTTGTCTCCAACATTATTATCACTCTTAAATAAT ATACAAATTCAAGAAACTTTCCCAAGCTGGATTAAAACAAGGAATGATTTCTTAAACGAACTGCCGCTAAAAGAAAAAAA TGCCTCTGCATTTTTAATTAAAAATCTTAATGATAAATACCTATATTGGGAAAATTGCTCTGGAAATTTAATTGAGAAGT TTAAGGTATTAAATAACTCTGGAAATTTGGATATTCTCACTTGTGCTGCCACTCATGGATATTTACCAATTCTAAGGGAG AATCCTGAAACTATCAAAGGACAAATTAATACGGCTATTAGGAGCCATGAAAATATTTTTGAAACAAAGCCTCTAGGTAT TTGGTTACCTGAATGCGCATATTATGAGGGTTTAGATGAAATACTATTTAATTCTGGAATTAGATATACGATCTTAGATG GACACGGGATTCTAAACTCGACACCAAGACCTAGATATGGTGTGTATGCCCCAATATGCTCGAAAAAAGGAGTGGCATTT TTTGGGAGAGATAGTGAGTCAACATTGCCCGTTTGGTCTGCTAAGGAAGGATTTCCGGGCGACAAAGTTTATAGGGAATT TCATAAAGATCTGGGGTGGGAATTACCTCTCTCAAAGCTCCAGAAGAAGGGTATTTCGACAAAAAGACCTTTGGGTTTAA AGTTTCATAAGATTACAGATGAAAATATATCTTTAGGGGAAAAAGAGTTTTACCTTGAAAATGAAGCCAAAAATAAAGCG GCAGAACATGCTGACGCCTATCTTCTCGCGAGATCCAAACAGCTAGAAAAATTGACTTTATCCTCTTCCTTTAAGCCTTT ATTGGTGGCTCCATTTGATGCAGAGTTATTTGGTCATTGGTGGTATGAGGGACCTTTTTTTATTGAAAATATACTTAAGA ACTCTAATAAATATTCAATTAAGCTTACAAATTTAAAAGAATTCTTAATTCAAAAACCAAATCTTCAGATTTGCGATCCA TCGCCATCAAGCTGGGGGCAAGGGGGTTACCATAATTACTGGATTAATGATGCAAATGCATGGATCGTTCCAGAAATTAC AAAAGCAGGCTCAACATTTGTAGATTTGTGCTTGGAAAATTTTAATAATGATTTATCTCTAAGACTCTTCAATCAAGCTG CTAGAGAACTACTTCTTTCTGAGTCTTCTGATTGGAGTTTTATTCTAAGAGCTGGAACCACAACTGAGCTCGCAAAAGAG AGAATAGAAAGACACTTATTCAGGTTCTGGAAATTGGTTGAAATGATTAAAAATCACTCTAATATTAACTTCAAATTTCT TGAAGATATTGAGGAAGAGGATAATGTCTTCCCAAATATAAATATTGATGATTGGCGAAAATAA
Upstream 100 bases:
>100_bases TATTTAAATTATTAAAGTATTCTTTTATGATCAAAGCTTCCTTTTATAAAATTTTAATTTTGATTTTTTATAGAATTTTC TGACATAAATTATAAAAAGT
Downstream 100 bases:
>100_bases AAATACTAATTTAACTTGAGCATCCCTAGTTTTACTTTTAGGGGTGAATTTATAAACATCTTACTCATCACGTAAATTAG TTTTGGAAGTGGAAGTGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: Glycoside Hydrolase Family; Glycosyl Hydrolase Family; Glycosy Hydrolase Family Protein; Alpha-Amylase; (1-_4)-Alpha-D-Glucan Branching; Family; Glycogen Branching; Glycosyl Transferase/Glycoside Hydrolase-Like Protein; Glycosyl Hydrolase Family Protein
Number of amino acids: Translated: 527; Mature: 527
Protein sequence:
>527_residues MNGRYPPKNVLGQLAIVLHAHLPYVRKNEINSLEEDWLFQAILECYIPLLQSIESSKKENPENTKLTISLSPTLLSLLNN IQIQETFPSWIKTRNDFLNELPLKEKNASAFLIKNLNDKYLYWENCSGNLIEKFKVLNNSGNLDILTCAATHGYLPILRE NPETIKGQINTAIRSHENIFETKPLGIWLPECAYYEGLDEILFNSGIRYTILDGHGILNSTPRPRYGVYAPICSKKGVAF FGRDSESTLPVWSAKEGFPGDKVYREFHKDLGWELPLSKLQKKGISTKRPLGLKFHKITDENISLGEKEFYLENEAKNKA AEHADAYLLARSKQLEKLTLSSSFKPLLVAPFDAELFGHWWYEGPFFIENILKNSNKYSIKLTNLKEFLIQKPNLQICDP SPSSWGQGGYHNYWINDANAWIVPEITKAGSTFVDLCLENFNNDLSLRLFNQAARELLLSESSDWSFILRAGTTTELAKE RIERHLFRFWKLVEMIKNHSNINFKFLEDIEEEDNVFPNINIDDWRK
Sequences:
>Translated_527_residues MNGRYPPKNVLGQLAIVLHAHLPYVRKNEINSLEEDWLFQAILECYIPLLQSIESSKKENPENTKLTISLSPTLLSLLNN IQIQETFPSWIKTRNDFLNELPLKEKNASAFLIKNLNDKYLYWENCSGNLIEKFKVLNNSGNLDILTCAATHGYLPILRE NPETIKGQINTAIRSHENIFETKPLGIWLPECAYYEGLDEILFNSGIRYTILDGHGILNSTPRPRYGVYAPICSKKGVAF FGRDSESTLPVWSAKEGFPGDKVYREFHKDLGWELPLSKLQKKGISTKRPLGLKFHKITDENISLGEKEFYLENEAKNKA AEHADAYLLARSKQLEKLTLSSSFKPLLVAPFDAELFGHWWYEGPFFIENILKNSNKYSIKLTNLKEFLIQKPNLQICDP SPSSWGQGGYHNYWINDANAWIVPEITKAGSTFVDLCLENFNNDLSLRLFNQAARELLLSESSDWSFILRAGTTTELAKE RIERHLFRFWKLVEMIKNHSNINFKFLEDIEEEDNVFPNINIDDWRK >Mature_527_residues MNGRYPPKNVLGQLAIVLHAHLPYVRKNEINSLEEDWLFQAILECYIPLLQSIESSKKENPENTKLTISLSPTLLSLLNN IQIQETFPSWIKTRNDFLNELPLKEKNASAFLIKNLNDKYLYWENCSGNLIEKFKVLNNSGNLDILTCAATHGYLPILRE NPETIKGQINTAIRSHENIFETKPLGIWLPECAYYEGLDEILFNSGIRYTILDGHGILNSTPRPRYGVYAPICSKKGVAF FGRDSESTLPVWSAKEGFPGDKVYREFHKDLGWELPLSKLQKKGISTKRPLGLKFHKITDENISLGEKEFYLENEAKNKA AEHADAYLLARSKQLEKLTLSSSFKPLLVAPFDAELFGHWWYEGPFFIENILKNSNKYSIKLTNLKEFLIQKPNLQICDP SPSSWGQGGYHNYWINDANAWIVPEITKAGSTFVDLCLENFNNDLSLRLFNQAARELLLSESSDWSFILRAGTTTELAKE RIERHLFRFWKLVEMIKNHSNINFKFLEDIEEEDNVFPNINIDDWRK
Specific function: Unknown
COG id: COG1543
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60730; Mature: 60730
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGRYPPKNVLGQLAIVLHAHLPYVRKNEINSLEEDWLFQAILECYIPLLQSIESSKKEN CCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC PENTKLTISLSPTLLSLLNNIQIQETFPSWIKTRNDFLNELPLKEKNASAFLIKNLNDKY CCCCEEEEEECHHHHHHHHCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCE LYWENCSGNLIEKFKVLNNSGNLDILTCAATHGYLPILRENPETIKGQINTAIRSHENIF EEEECCCCCHHHHHHHHCCCCCEEEEEEECCCCCCEEECCCCHHHHHHHHHHHHHHCHHH ETKPLGIWLPECAYYEGLDEILFNSGIRYTILDGHGILNSTPRPRYGVYAPICSKKGVAF CCCCCEEECCCHHHHCCHHHHHHCCCCEEEEEECCCCCCCCCCCCCCEEECCCCCCCCEE FGRDSESTLPVWSAKEGFPGDKVYREFHKDLGWELPLSKLQKKGISTKRPLGLKFHKITD EECCCCCCCCEECCCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCEEEEEECC ENISLGEKEFYLENEAKNKAAEHADAYLLARSKQLEKLTLSSSFKPLLVAPFDAELFGHW CCCCCCCHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHH WYEGPFFIENILKNSNKYSIKLTNLKEFLIQKPNLQICDPSPSSWGQGGYHNYWINDANA CCCCHHHHHHHHCCCCEEEEEEECHHHHHHCCCCCEEECCCCCCCCCCCCCCEEEECCCE WIVPEITKAGSTFVDLCLENFNNDLSLRLFNQAARELLLSESSDWSFILRAGTTTELAKE EEEECHHHCCHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHH RIERHLFRFWKLVEMIKNHSNINFKFLEDIEEEDNVFPNINIDDWRK HHHHHHHHHHHHHHHHHCCCCCCEEEHHCCCHHCCCCCCCCCCCCCC >Mature Secondary Structure MNGRYPPKNVLGQLAIVLHAHLPYVRKNEINSLEEDWLFQAILECYIPLLQSIESSKKEN CCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC PENTKLTISLSPTLLSLLNNIQIQETFPSWIKTRNDFLNELPLKEKNASAFLIKNLNDKY CCCCEEEEEECHHHHHHHHCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCE LYWENCSGNLIEKFKVLNNSGNLDILTCAATHGYLPILRENPETIKGQINTAIRSHENIF EEEECCCCCHHHHHHHHCCCCCEEEEEEECCCCCCEEECCCCHHHHHHHHHHHHHHCHHH ETKPLGIWLPECAYYEGLDEILFNSGIRYTILDGHGILNSTPRPRYGVYAPICSKKGVAF CCCCCEEECCCHHHHCCHHHHHHCCCCEEEEEECCCCCCCCCCCCCCEEECCCCCCCCEE FGRDSESTLPVWSAKEGFPGDKVYREFHKDLGWELPLSKLQKKGISTKRPLGLKFHKITD EECCCCCCCCEECCCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCEEEEEECC ENISLGEKEFYLENEAKNKAAEHADAYLLARSKQLEKLTLSSSFKPLLVAPFDAELFGHW CCCCCCCHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHH WYEGPFFIENILKNSNKYSIKLTNLKEFLIQKPNLQICDPSPSSWGQGGYHNYWINDANA CCCCHHHHHHHHCCCCEEEEEEECHHHHHHCCCCCEEECCCCCCCCCCCCCCEEEECCCE WIVPEITKAGSTFVDLCLENFNNDLSLRLFNQAARELLLSESSDWSFILRAGTTTELAKE EEEECHHHCCHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHH RIERHLFRFWKLVEMIKNHSNINFKFLEDIEEEDNVFPNINIDDWRK HHHHHHHHHHHHHHHHHCCCCCCEEEHHCCCHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA