Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
---|---|
Accession | NC_009091 |
Length | 1,641,879 |
Click here to switch to the map view.
The map label for this gene is guaB [C]
Identifier: 126696506
GI number: 126696506
Start: 977462
End: 978625
Strand: Reverse
Name: guaB [C]
Synonym: P9301_11681
Alternate gene names: 126696506
Gene position: 978625-977462 (Counterclockwise)
Preceding gene: 126696509
Following gene: 126696505
Centisome position: 59.6
GC content: 39.43
Gene sequence:
>1164_bases GTGAATAATGAACTTGGTTTAAATAAAGAAGTCAGACGGGCTTATGGCATTGATGAAATAGCTTTAGTCCCTGGTAAAAG AACACTTGATTACGATTTGACTGATCCTTCTTGGTCAATAGGTGATTTCAAAAGAGAAGTTCCGATCGTAGCTAGTGCCA TGGATAGTGTTGTCGATGTCAATACAGCTGTAGAGCTCACAAAATTAGGTTCCCTAGGGGTTATTAATATGGAGGGCGTA CAAACACGATATGAAAACCCTGATGAAATATTGAAGCAAATAGCATCAGTTGGGAAGAATGATTTTGTTCCATTAATGCA GAAAATATACAGTGAACCGGTCAAGGAAGGATTGATTTTAAAAAGAATAAATGAGGTCAAAGAAAGAGGAGGTATCGCAG CTTTTAGTGGGACTCCTCAAGCCGCCATCAAGTTTAAAGAAACACTAAATAATTCCAAAATAGATTTATTTTTTCTTCAA GGAACAGTTGTTTCAACTGAACATCTTGGAATGGAAGGTAAGGAAACCTTAAATATTAAAGATCTCTGCCAATCTATGAA TGTTCCAGTTGTAGCTGGTAATTGTGTTACTTACGAAGTTGCAAAACTTCTCATGAATGCTGGAGTTGCGGGATTGATGG TTGGGATAGGACCAGGAGCAGCATGTACATCAAGAGGAGTATTGGGAATTGGAATCCCTCAAGCAACTGCAATTGCTGAT TGTAGTGCGGCAAGAAATGATTACTTTGAAGAAAGTGGTCGTTATATACCTATTATTGGTGATGGAGGAATTGTTACTGG CGGAGATATTTGTAAATGTTTAGCATGTGGAGCAGATGCAGTAATGATTGGATCACCAATAGCTAAATCTTCAAACGCCC CAGGTAAAGGATTTCACTGGGGTATGGCTACTCCAAGTCCAGTGTTGCCGAGGGGCACAAGAATTGAAGTTGGTTCTACA GGATCCTTGGAAAGGATAATTAAAGGCCCGGCCCTACTTGATGATGGGACACATAACTTATTAGGAGCCATTAGAACATC AATGAGTACTCTTGGTGCAAAAAATATTAAAGAAATGCAAGAAGTTGAAATAGTTATCGCACCATCGCTTCTTACTGAGG GTAAGGTTTATCAAAAAGCTCAGCAGCTCGGGATGGGTAAGTAG
Upstream 100 bases:
>100_bases CATTTACACACAAATCAAAATAAAACCTGTTGTTTTTGAATAAACCTTGGCTTATTACCCCTTTAGTTGTTAATTTAATC AGAATAAAAAGAAAACTATC
Downstream 100 bases:
>100_bases TTCATCTAGAGCAAAATGAGAAAAAACCTTAGTGAATAAGTTATTAAATTGAAAAATTTTCTAATTAGGAGTTATTATTA AATGATGGGGGAAACCCCAT
Product: inosine 5-monophosphate dehydrogenase
Products: xanthosine 5'-phosphate; NADH; H+
Alternate protein names: NA
Number of amino acids: Translated: 387; Mature: 387
Protein sequence:
>387_residues MNNELGLNKEVRRAYGIDEIALVPGKRTLDYDLTDPSWSIGDFKREVPIVASAMDSVVDVNTAVELTKLGSLGVINMEGV QTRYENPDEILKQIASVGKNDFVPLMQKIYSEPVKEGLILKRINEVKERGGIAAFSGTPQAAIKFKETLNNSKIDLFFLQ GTVVSTEHLGMEGKETLNIKDLCQSMNVPVVAGNCVTYEVAKLLMNAGVAGLMVGIGPGAACTSRGVLGIGIPQATAIAD CSAARNDYFEESGRYIPIIGDGGIVTGGDICKCLACGADAVMIGSPIAKSSNAPGKGFHWGMATPSPVLPRGTRIEVGST GSLERIIKGPALLDDGTHNLLGAIRTSMSTLGAKNIKEMQEVEIVIAPSLLTEGKVYQKAQQLGMGK
Sequences:
>Translated_387_residues MNNELGLNKEVRRAYGIDEIALVPGKRTLDYDLTDPSWSIGDFKREVPIVASAMDSVVDVNTAVELTKLGSLGVINMEGV QTRYENPDEILKQIASVGKNDFVPLMQKIYSEPVKEGLILKRINEVKERGGIAAFSGTPQAAIKFKETLNNSKIDLFFLQ GTVVSTEHLGMEGKETLNIKDLCQSMNVPVVAGNCVTYEVAKLLMNAGVAGLMVGIGPGAACTSRGVLGIGIPQATAIAD CSAARNDYFEESGRYIPIIGDGGIVTGGDICKCLACGADAVMIGSPIAKSSNAPGKGFHWGMATPSPVLPRGTRIEVGST GSLERIIKGPALLDDGTHNLLGAIRTSMSTLGAKNIKEMQEVEIVIAPSLLTEGKVYQKAQQLGMGK >Mature_387_residues MNNELGLNKEVRRAYGIDEIALVPGKRTLDYDLTDPSWSIGDFKREVPIVASAMDSVVDVNTAVELTKLGSLGVINMEGV QTRYENPDEILKQIASVGKNDFVPLMQKIYSEPVKEGLILKRINEVKERGGIAAFSGTPQAAIKFKETLNNSKIDLFFLQ GTVVSTEHLGMEGKETLNIKDLCQSMNVPVVAGNCVTYEVAKLLMNAGVAGLMVGIGPGAACTSRGVLGIGIPQATAIAD CSAARNDYFEESGRYIPIIGDGGIVTGGDICKCLACGADAVMIGSPIAKSSNAPGKGFHWGMATPSPVLPRGTRIEVGST GSLERIIKGPALLDDGTHNLLGAIRTSMSTLGAKNIKEMQEVEIVIAPSLLTEGKVYQKAQQLGMGK
Specific function: Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides. [C
COG id: COG0516
COG function: function code F; IMP dehydrogenase/GMP reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the IMPDH/GMPR family [H]
Homologues:
Organism=Homo sapiens, GI66933016, Length=258, Percent_Identity=31.3953488372093, Blast_Score=89, Evalue=7e-18, Organism=Homo sapiens, GI50541954, Length=377, Percent_Identity=25.4641909814324, Blast_Score=87, Evalue=3e-17, Organism=Homo sapiens, GI50541952, Length=377, Percent_Identity=25.4641909814324, Blast_Score=87, Evalue=3e-17, Organism=Homo sapiens, GI50541948, Length=377, Percent_Identity=25.4641909814324, Blast_Score=87, Evalue=3e-17, Organism=Homo sapiens, GI50541956, Length=384, Percent_Identity=25.2604166666667, Blast_Score=87, Evalue=3e-17, Organism=Homo sapiens, GI217035150, Length=113, Percent_Identity=43.3628318584071, Blast_Score=85, Evalue=1e-16, Organism=Homo sapiens, GI217035146, Length=113, Percent_Identity=43.3628318584071, Blast_Score=85, Evalue=1e-16, Organism=Homo sapiens, GI217035152, Length=112, Percent_Identity=43.75, Blast_Score=85, Evalue=1e-16, Organism=Homo sapiens, GI34328930, Length=112, Percent_Identity=43.75, Blast_Score=85, Evalue=1e-16, Organism=Homo sapiens, GI217035148, Length=113, Percent_Identity=43.3628318584071, Blast_Score=85, Evalue=1e-16, Organism=Homo sapiens, GI34328928, Length=112, Percent_Identity=43.75, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI156616279, Length=112, Percent_Identity=43.75, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI156104880, Length=190, Percent_Identity=29.4736842105263, Blast_Score=78, Evalue=1e-14, Organism=Escherichia coli, GI1786293, Length=354, Percent_Identity=25.7062146892655, Blast_Score=79, Evalue=6e-16, Organism=Escherichia coli, GI1788855, Length=241, Percent_Identity=29.8755186721992, Blast_Score=74, Evalue=1e-14, Organism=Caenorhabditis elegans, GI71994385, Length=142, Percent_Identity=38.7323943661972, Blast_Score=89, Evalue=4e-18, Organism=Caenorhabditis elegans, GI71994389, Length=142, Percent_Identity=38.7323943661972, Blast_Score=89, Evalue=5e-18, Organism=Caenorhabditis elegans, GI17560440, Length=187, Percent_Identity=30.4812834224599, Blast_Score=79, Evalue=6e-15, Organism=Saccharomyces cerevisiae, GI6322012, Length=112, Percent_Identity=36.6071428571429, Blast_Score=76, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6323464, Length=113, Percent_Identity=35.3982300884956, Blast_Score=75, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6323585, Length=113, Percent_Identity=34.5132743362832, Blast_Score=74, Evalue=4e-14, Organism=Drosophila melanogaster, GI24641071, Length=168, Percent_Identity=36.3095238095238, Blast_Score=89, Evalue=4e-18, Organism=Drosophila melanogaster, GI24641073, Length=168, Percent_Identity=36.3095238095238, Blast_Score=89, Evalue=4e-18, Organism=Drosophila melanogaster, GI28571163, Length=170, Percent_Identity=35.8823529411765, Blast_Score=89, Evalue=5e-18,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR001093 - InterPro: IPR005992 [H]
Pfam domain/function: PF00478 IMPDH [H]
EC number: 1.1.1.205
Molecular weight: Translated: 41011; Mature: 41011
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNELGLNKEVRRAYGIDEIALVPGKRTLDYDLTDPSWSIGDFKREVPIVASAMDSVVDV CCCCCCCCHHHHHHCCCCCEEECCCCCEEEECCCCCCCCCCCHHHCCCHHHHHHHHHHHH NTAVELTKLGSLGVINMEGVQTRYENPDEILKQIASVGKNDFVPLMQKIYSEPVKEGLIL HHHHHHEECCCCCEEECCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH KRINEVKERGGIAAFSGTPQAAIKFKETLNNSKIDLFFLQGTVVSTEHLGMEGKETLNIK HHHHHHHHHCCEEEECCCCHHHHHHHHHCCCCCEEEEEEECEEEEHHHCCCCCCCCCCHH DLCQSMNVPVVAGNCVTYEVAKLLMNAGVAGLMVGIGPGAACTSRGVLGIGIPQATAIAD HHHHHCCCCEEECCHHHHHHHHHHHHCCCCEEEEECCCCCHHHCCCEEEECCCCHHHHHH CSAARNDYFEESGRYIPIIGDGGIVTGGDICKCLACGADAVMIGSPIAKSSNAPGKGFHW HHHHHHHHHHHCCCEEEEEECCCEEECHHHHHHHHCCCCEEEECCCCCCCCCCCCCCEEC GMATPSPVLPRGTRIEVGSTGSLERIIKGPALLDDGTHNLLGAIRTSMSTLGAKNIKEMQ CCCCCCCCCCCCCEEEECCCCCHHHHHCCCCEECCCHHHHHHHHHHHHHHHCHHHHHHHH EVEIVIAPSLLTEGKVYQKAQQLGMGK HEEEEEECCHHHCCHHHHHHHHHCCCC >Mature Secondary Structure MNNELGLNKEVRRAYGIDEIALVPGKRTLDYDLTDPSWSIGDFKREVPIVASAMDSVVDV CCCCCCCCHHHHHHCCCCCEEECCCCCEEEECCCCCCCCCCCHHHCCCHHHHHHHHHHHH NTAVELTKLGSLGVINMEGVQTRYENPDEILKQIASVGKNDFVPLMQKIYSEPVKEGLIL HHHHHHEECCCCCEEECCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH KRINEVKERGGIAAFSGTPQAAIKFKETLNNSKIDLFFLQGTVVSTEHLGMEGKETLNIK HHHHHHHHHCCEEEECCCCHHHHHHHHHCCCCCEEEEEEECEEEEHHHCCCCCCCCCCHH DLCQSMNVPVVAGNCVTYEVAKLLMNAGVAGLMVGIGPGAACTSRGVLGIGIPQATAIAD HHHHHCCCCEEECCHHHHHHHHHHHHCCCCEEEEECCCCCHHHCCCEEEECCCCHHHHHH CSAARNDYFEESGRYIPIIGDGGIVTGGDICKCLACGADAVMIGSPIAKSSNAPGKGFHW HHHHHHHHHHHCCCEEEEEECCCEEECHHHHHHHHCCCCEEEECCCCCCCCCCCCCCEEC GMATPSPVLPRGTRIEVGSTGSLERIIKGPALLDDGTHNLLGAIRTSMSTLGAKNIKEMQ CCCCCCCCCCCCCEEEECCCCCHHHHHCCCCEECCCHHHHHHHHHHHHHHHCHHHHHHHH EVEIVIAPSLLTEGKVYQKAQQLGMGK HEEEEEECCHHHCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: inosine 5'-phosphate; NAD+; H2O
Specific reaction: inosine 5'-phosphate + NAD+ + H2O = xanthosine 5'-phosphate + NADH + H+
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA