Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
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Accession | NC_009091 |
Length | 1,641,879 |
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The map label for this gene is 126696410
Identifier: 126696410
GI number: 126696410
Start: 922582
End: 923385
Strand: Reverse
Name: 126696410
Synonym: P9301_10721
Alternate gene names: NA
Gene position: 923385-922582 (Counterclockwise)
Preceding gene: 126696411
Following gene: 126696409
Centisome position: 56.24
GC content: 22.89
Gene sequence:
>804_bases ATGAACAGTAATATAAGATTTGAATTATCATTTAAAAATATTTCTCAGTTAGACAATAAACTTAATTTCTGCAAATTAAA TAATATAAAAAATATCAATATTCCATGTAAAGGACTTATAAAGAAGGATTTATTTAATTCAACTATAAAATATATATCTA AAGACTATTATGAATTTAATGTGACCTATCACTATAGTCTTTATCATCAATATTCAAAAAATAAAGAAAAATCGTATCAG GATTTCTTAGATTTTGTTAAAAGTTCTCAGACTAATCAAAATTATGAAATTCTGTTAGTGTCGGGATCTAATAAGAAAAA AAACTTTGACTCAGTTGATGTATTATCTTATTTAAAAAAAGAAAAAAATTTAAAAGTTAAATTAGGTATAGCTTACAATC CATATTTGAAAAAATATTATAATATTTCGTCAGAAAGAGAGAGGTTCGAAAGAAAAATTTCAACTGGATTAATAAATTCA ATTTGGTTTCAATATGGTACAGACATTAAAGTTCTTCATAATGAGTTGACTTATCTCAAGAAAATAACAAAAGACGAAAG ATTAAATCTATTTGGAAGTTTATTTATTCCTTCTAAACAATTTATATCGCGGTTTAAATTTCGTCCTTGGAAAGAGGTAT ACATATCAGAAAAGTGTTTATTTGCCTTAGATAATTTTCTTGATTTTACAAGAGATTTAGTTAGTTTTTATAAAAGTAAT AATATTACTCCTGTAATTGAATCTGATTTTTCATCATCAGATAAACTTGATTCTGTTTATAGTTTTTTAGAAAATGAAAG ATAA
Upstream 100 bases:
>100_bases TTCTAAAGTCTAATAATAAAAAGACGTCATCCAAAATAAGAATCGTAGCAGATGCATGTTTTCGTTAATATGTTGAGTGA TTAATTATGACTACTAAATA
Downstream 100 bases:
>100_bases TTTTTGTCAATATTAATCCTATGAAAAGTGATGTTACATATGACTTGTTAATAATAGGTGGAGGTATATCCGCTTGTGTT TTTGCTTCGAAGTATCTGAA
Product: amphipathic helix repeat-containing protein
Products: NA
Alternate protein names: Paired Amphipathic Helix Repeat
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MNSNIRFELSFKNISQLDNKLNFCKLNNIKNINIPCKGLIKKDLFNSTIKYISKDYYEFNVTYHYSLYHQYSKNKEKSYQ DFLDFVKSSQTNQNYEILLVSGSNKKKNFDSVDVLSYLKKEKNLKVKLGIAYNPYLKKYYNISSERERFERKISTGLINS IWFQYGTDIKVLHNELTYLKKITKDERLNLFGSLFIPSKQFISRFKFRPWKEVYISEKCLFALDNFLDFTRDLVSFYKSN NITPVIESDFSSSDKLDSVYSFLENER
Sequences:
>Translated_267_residues MNSNIRFELSFKNISQLDNKLNFCKLNNIKNINIPCKGLIKKDLFNSTIKYISKDYYEFNVTYHYSLYHQYSKNKEKSYQ DFLDFVKSSQTNQNYEILLVSGSNKKKNFDSVDVLSYLKKEKNLKVKLGIAYNPYLKKYYNISSERERFERKISTGLINS IWFQYGTDIKVLHNELTYLKKITKDERLNLFGSLFIPSKQFISRFKFRPWKEVYISEKCLFALDNFLDFTRDLVSFYKSN NITPVIESDFSSSDKLDSVYSFLENER >Mature_267_residues MNSNIRFELSFKNISQLDNKLNFCKLNNIKNINIPCKGLIKKDLFNSTIKYISKDYYEFNVTYHYSLYHQYSKNKEKSYQ DFLDFVKSSQTNQNYEILLVSGSNKKKNFDSVDVLSYLKKEKNLKVKLGIAYNPYLKKYYNISSERERFERKISTGLINS IWFQYGTDIKVLHNELTYLKKITKDERLNLFGSLFIPSKQFISRFKFRPWKEVYISEKCLFALDNFLDFTRDLVSFYKSN NITPVIESDFSSSDKLDSVYSFLENER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31852; Mature: 31852
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSNIRFELSFKNISQLDNKLNFCKLNNIKNINIPCKGLIKKDLFNSTIKYISKDYYEFN CCCCEEEEEEHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEE VTYHYSLYHQYSKNKEKSYQDFLDFVKSSQTNQNYEILLVSGSNKKKNFDSVDVLSYLKK EEEEEEEHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHH EKNLKVKLGIAYNPYLKKYYNISSERERFERKISTGLINSIWFQYGTDIKVLHNELTYLK CCCCEEEEEEEECHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH KITKDERLNLFGSLFIPSKQFISRFKFRPWKEVYISEKCLFALDNFLDFTRDLVSFYKSN HHCCCHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NITPVIESDFSSSDKLDSVYSFLENER CCCEEECCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MNSNIRFELSFKNISQLDNKLNFCKLNNIKNINIPCKGLIKKDLFNSTIKYISKDYYEFN CCCCEEEEEEHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEE VTYHYSLYHQYSKNKEKSYQDFLDFVKSSQTNQNYEILLVSGSNKKKNFDSVDVLSYLKK EEEEEEEHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHH EKNLKVKLGIAYNPYLKKYYNISSERERFERKISTGLINSIWFQYGTDIKVLHNELTYLK CCCCEEEEEEEECHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH KITKDERLNLFGSLFIPSKQFISRFKFRPWKEVYISEKCLFALDNFLDFTRDLVSFYKSN HHCCCHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NITPVIESDFSSSDKLDSVYSFLENER CCCEEECCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA