Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
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Accession | NC_009091 |
Length | 1,641,879 |
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The map label for this gene is 126696409
Identifier: 126696409
GI number: 126696409
Start: 921395
End: 922561
Strand: Reverse
Name: 126696409
Synonym: P9301_10711
Alternate gene names: NA
Gene position: 922561-921395 (Counterclockwise)
Preceding gene: 126696410
Following gene: 126696407
Centisome position: 56.19
GC content: 24.42
Gene sequence:
>1167_bases ATGAAAAGTGATGTTACATATGACTTGTTAATAATAGGTGGAGGTATATCCGCTTGTGTTTTTGCTTCGAAGTATCTGAA AAATAATATTACAAAAAAAGTTGGATTAATTGAAATTGGTCGCGGTCTTGGAGGGAGATCAAGTACAAGAATAAGCAAAA AATATAAAGGATGGAAACTAAACCATGGTTCTCCAAATTTTAATATATCTAACAGTAAAAATAATCTTCTATTAAAAAGA TATATTGATGAATTATTGGAAAATAAATATATAAAAATTGACGATTCAGATATATTTTTTCTAAATGAAGATTCTAATTT AGAAACCGTAAAAAAATCTGAATTTTCTTGCGGAGTTAATTATCTATCTTTAGATTCCATGAGTGAATTATCGAAAAAGA TAATTGATTCAAATAATTTAAAAGAGAAAATTGATTTTTTCTTTGAAACTTTTATAGTTGATATGAAGTTTAATGATAAG GAATGGTTACTAACATCAAAAAATGGCGTCAAATTCAAGTCTAAATATTTAATTTGTTCAACTAATTTGTTGTTACATAA GAGGTCTTTAAAAATATTAAACGTTAATCAAATTCCATTAAGGAAAGCTATTCCTGTTAATAATGATAAAAAAATAGATT TACTATTAAATTACTTAGAAGAACAAACATTTATTCCCAGGTTAACTTTTTTAATTTACACAAATGAAAATTATAGTTAT AAAGATTTTTATTATAAAAAACAAAGGTATTTTTATTTAAAAAATCAATTAGAAAAAAAATATAGATTTGAAAGAGTTAT TTTTCAGTTGCAAGATAATAATAAATTAGGAATTGTAGTTCATTCAAAAAACGCAGAGTTAATTAACTCTTATATAAGTG CAAAAGATGAAGAAGTTTTTAAACAAAAAATAATTACAAATTTCAATAAACTTTTTGAAGAGAATTCTGTAATCCATAAA TTAACTTATGATGAAAAAATATCTATTATGAAATGGAGAGCTTCACAGCCTTCTGGCCTTGCCGTACCATTATCTTTACA ATTTAGTAGAAGATATAGAATTGGATTTTGCGGAGACTGGTTTGAAGGAGATGGATTTGGCAGAATTGAAGGCTCAATTT TAAGTGCTCTAATATTAGAGAAAAAAATTAAAGACTTAATTAAATAA
Upstream 100 bases:
>100_bases TTACTCCTGTAATTGAATCTGATTTTTCATCATCAGATAAACTTGATTCTGTTTATAGTTTTTTAGAAAATGAAAGATAA TTTTTGTCAATATTAATCCT
Downstream 100 bases:
>100_bases TTTTTTCAGAATGGGATCTATATCAGTGTTTTTTTTAATAATGAATTTATTCGTATTATTTTTTTGGCTATTAGGTTTAA ATTTTTCGTAATAAATGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 388; Mature: 388
Protein sequence:
>388_residues MKSDVTYDLLIIGGGISACVFASKYLKNNITKKVGLIEIGRGLGGRSSTRISKKYKGWKLNHGSPNFNISNSKNNLLLKR YIDELLENKYIKIDDSDIFFLNEDSNLETVKKSEFSCGVNYLSLDSMSELSKKIIDSNNLKEKIDFFFETFIVDMKFNDK EWLLTSKNGVKFKSKYLICSTNLLLHKRSLKILNVNQIPLRKAIPVNNDKKIDLLLNYLEEQTFIPRLTFLIYTNENYSY KDFYYKKQRYFYLKNQLEKKYRFERVIFQLQDNNKLGIVVHSKNAELINSYISAKDEEVFKQKIITNFNKLFEENSVIHK LTYDEKISIMKWRASQPSGLAVPLSLQFSRRYRIGFCGDWFEGDGFGRIEGSILSALILEKKIKDLIK
Sequences:
>Translated_388_residues MKSDVTYDLLIIGGGISACVFASKYLKNNITKKVGLIEIGRGLGGRSSTRISKKYKGWKLNHGSPNFNISNSKNNLLLKR YIDELLENKYIKIDDSDIFFLNEDSNLETVKKSEFSCGVNYLSLDSMSELSKKIIDSNNLKEKIDFFFETFIVDMKFNDK EWLLTSKNGVKFKSKYLICSTNLLLHKRSLKILNVNQIPLRKAIPVNNDKKIDLLLNYLEEQTFIPRLTFLIYTNENYSY KDFYYKKQRYFYLKNQLEKKYRFERVIFQLQDNNKLGIVVHSKNAELINSYISAKDEEVFKQKIITNFNKLFEENSVIHK LTYDEKISIMKWRASQPSGLAVPLSLQFSRRYRIGFCGDWFEGDGFGRIEGSILSALILEKKIKDLIK >Mature_388_residues MKSDVTYDLLIIGGGISACVFASKYLKNNITKKVGLIEIGRGLGGRSSTRISKKYKGWKLNHGSPNFNISNSKNNLLLKR YIDELLENKYIKIDDSDIFFLNEDSNLETVKKSEFSCGVNYLSLDSMSELSKKIIDSNNLKEKIDFFFETFIVDMKFNDK EWLLTSKNGVKFKSKYLICSTNLLLHKRSLKILNVNQIPLRKAIPVNNDKKIDLLLNYLEEQTFIPRLTFLIYTNENYSY KDFYYKKQRYFYLKNQLEKKYRFERVIFQLQDNNKLGIVVHSKNAELINSYISAKDEEVFKQKIITNFNKLFEENSVIHK LTYDEKISIMKWRASQPSGLAVPLSLQFSRRYRIGFCGDWFEGDGFGRIEGSILSALILEKKIKDLIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45284; Mature: 45284
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSDVTYDLLIIGGGISACVFASKYLKNNITKKVGLIEIGRGLGGRSSTRISKKYKGWKL CCCCCEEEEEEECCCHHHHHHHHHHHHCCHHHHCCEEEECCCCCCCCCCHHHHHCCCEEE NHGSPNFNISNSKNNLLLKRYIDELLENKYIKIDDSDIFFLNEDSNLETVKKSEFSCGVN CCCCCCCEECCCCCCCHHHHHHHHHHCCCEEEECCCEEEEEECCCCCCHHHHCCHHCCCC YLSLDSMSELSKKIIDSNNLKEKIDFFFETFIVDMKFNDKEWLLTSKNGVKFKSKYLICS EEECCCHHHHHHHHHCCCCHHHHHHHHHHHEEEEEEECCCEEEEECCCCCEEEEEEEEEE TNLLLHKRSLKILNVNQIPLRKAIPVNNDKKIDLLLNYLEEQTFIPRLTFLIYTNENYSY CCEEEEECCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCC KDFYYKKQRYFYLKNQLEKKYRFERVIFQLQDNNKLGIVVHSKNAELINSYISAKDEEVF HHEEEEHHEEEHHHHHHHHHHHHEEEEEEEECCCEEEEEEECCCHHHHHHHHCCCHHHHH KQKIITNFNKLFEENSVIHKLTYDEKISIMKWRASQPSGLAVPLSLQFSRRYRIGFCGDW HHHHHHHHHHHHHCCCEEEEEECCCCEEEEEEECCCCCCEEEEEEEEECCEEEEEEEECC FEGDGFGRIEGSILSALILEKKIKDLIK CCCCCCCEEHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKSDVTYDLLIIGGGISACVFASKYLKNNITKKVGLIEIGRGLGGRSSTRISKKYKGWKL CCCCCEEEEEEECCCHHHHHHHHHHHHCCHHHHCCEEEECCCCCCCCCCHHHHHCCCEEE NHGSPNFNISNSKNNLLLKRYIDELLENKYIKIDDSDIFFLNEDSNLETVKKSEFSCGVN CCCCCCCEECCCCCCCHHHHHHHHHHCCCEEEECCCEEEEEECCCCCCHHHHCCHHCCCC YLSLDSMSELSKKIIDSNNLKEKIDFFFETFIVDMKFNDKEWLLTSKNGVKFKSKYLICS EEECCCHHHHHHHHHCCCCHHHHHHHHHHHEEEEEEECCCEEEEECCCCCEEEEEEEEEE TNLLLHKRSLKILNVNQIPLRKAIPVNNDKKIDLLLNYLEEQTFIPRLTFLIYTNENYSY CCEEEEECCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCC KDFYYKKQRYFYLKNQLEKKYRFERVIFQLQDNNKLGIVVHSKNAELINSYISAKDEEVF HHEEEEHHEEEHHHHHHHHHHHHEEEEEEEECCCEEEEEEECCCHHHHHHHHCCCHHHHH KQKIITNFNKLFEENSVIHKLTYDEKISIMKWRASQPSGLAVPLSLQFSRRYRIGFCGDW HHHHHHHHHHHHHCCCEEEEEECCCCEEEEEEECCCCCCEEEEEEEEECCEEEEEEEECC FEGDGFGRIEGSILSALILEKKIKDLIK CCCCCCCEEHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA