Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
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Accession | NC_009091 |
Length | 1,641,879 |
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The map label for this gene is 126696372
Identifier: 126696372
GI number: 126696372
Start: 893506
End: 893874
Strand: Reverse
Name: 126696372
Synonym: P9301_10341
Alternate gene names: NA
Gene position: 893874-893506 (Counterclockwise)
Preceding gene: 126696373
Following gene: 126696371
Centisome position: 54.44
GC content: 23.31
Gene sequence:
>369_bases GTGACTATTTGGAAATTAAGGAACAATAATCCATTGAGAAAATCTTATGTTACTAACAATATTAAACTTAACGAATTCGA TGCCTTAATTAGAATTACAGTTGAAATGTCTAAATATTTATATCCTTATATCAGAGAGATAATGAAATCTAAAGAAAATA TTGAACAGAATTCAGTTATTTGGAATGATTTTAAAAATAGATTTATTGAGTTAATTAAAGAGAGGTTTAATGTAGATAGT ATGAGAGTGAAAAAGCTTTTAAATCAAGCTGAAAATGATGAGATTATAATAAAATCTTTGCTTATTTTATCTTTTTGCAT TTCAAATAAGGGTTATCAAAAGTTGAAGAATTTTTTATACGATTTTTAA
Upstream 100 bases:
>100_bases TTTATTATTATTAATATTAGAGACTATTGACTTAAATGGTATAGACTCCCTTTACGCCTTATCAACTAGACTTAATCTAA ATACGGTTTTTCCAAATAAA
Downstream 100 bases:
>100_bases CATGATGCAAAATAAATTGTCATTTCATCAATCTTCCGCAAGCCTCGAAATAATTGGACTGCCAGATTATTCAAATAATG AGAAAAAGGATCAAATATCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 122; Mature: 121
Protein sequence:
>122_residues MTIWKLRNNNPLRKSYVTNNIKLNEFDALIRITVEMSKYLYPYIREIMKSKENIEQNSVIWNDFKNRFIELIKERFNVDS MRVKKLLNQAENDEIIIKSLLILSFCISNKGYQKLKNFLYDF
Sequences:
>Translated_122_residues MTIWKLRNNNPLRKSYVTNNIKLNEFDALIRITVEMSKYLYPYIREIMKSKENIEQNSVIWNDFKNRFIELIKERFNVDS MRVKKLLNQAENDEIIIKSLLILSFCISNKGYQKLKNFLYDF >Mature_121_residues TIWKLRNNNPLRKSYVTNNIKLNEFDALIRITVEMSKYLYPYIREIMKSKENIEQNSVIWNDFKNRFIELIKERFNVDSM RVKKLLNQAENDEIIIKSLLILSFCISNKGYQKLKNFLYDF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14807; Mature: 14675
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIWKLRNNNPLRKSYVTNNIKLNEFDALIRITVEMSKYLYPYIREIMKSKENIEQNSVI CCEEEECCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCHH WNDFKNRFIELIKERFNVDSMRVKKLLNQAENDEIIIKSLLILSFCISNKGYQKLKNFLY HHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHC DF CC >Mature Secondary Structure TIWKLRNNNPLRKSYVTNNIKLNEFDALIRITVEMSKYLYPYIREIMKSKENIEQNSVI CEEEECCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCHH WNDFKNRFIELIKERFNVDSMRVKKLLNQAENDEIIIKSLLILSFCISNKGYQKLKNFLY HHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHC DF CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA