Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
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Accession | NC_009091 |
Length | 1,641,879 |
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The map label for this gene is 126696371
Identifier: 126696371
GI number: 126696371
Start: 892914
End: 893504
Strand: Reverse
Name: 126696371
Synonym: P9301_10331
Alternate gene names: NA
Gene position: 893504-892914 (Counterclockwise)
Preceding gene: 126696372
Following gene: 126696370
Centisome position: 54.42
GC content: 25.72
Gene sequence:
>591_bases ATGATGCAAAATAAATTGTCATTTCATCAATCTTCCGCAAGCCTCGAAATAATTGGACTGCCAGATTATTCAAATAATGA GAAAAAGGATCAAATATCTATTATTTCTCAATGGAAATTAACCCTAGTTGATAAACCACTTATTGAAGGAAAAATTGAAC ATTTAGGGCCTATTATGGATGCTTTTTATATTTATTCAAATCTTTTAATCAAAAATGAAATCCCAATATATGAGTCTAAA TTAATCGATATAAAAGCCGATAATCTCCACACACATAATATTGTTCTCAAGAGCTCTAAAACAAATGTAAAGCCTTTAGT TTTAAAGATTGGTAATTCATTGCTTTCTGATACTTTAAATTGTTTTGATCAGTTAAATGAATCGCCAAAAGTAAGAATAA AAAAAACTGATATACGTACTAACATTCCTAAAAAATTAAGATTAGGGTTAAATAAAAAAATTAACTTTTTCAATTTCTTT ATTCCACCGTTTTTTGCTATTTGCTCTTTAATTCTATTCTCTTCTTCTTTTATTTATTTTTATAGTCCTTTTGAAAATAT AGAAAAAAAAGAACTAATAAACTCTGAATAA
Upstream 100 bases:
>100_bases GAAAATGATGAGATTATAATAAAATCTTTGCTTATTTTATCTTTTTGCATTTCAAATAAGGGTTATCAAAAGTTGAAGAA TTTTTTATACGATTTTTAAC
Downstream 100 bases:
>100_bases AGAGCAATTAGCATCTTAAATACAAACACGATACTATGGGTTAATTTCTTTTCAGAGTTATTCAAATTTATTCTTTGAGC TTTGATTTATGGCAGATTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 196; Mature: 196
Protein sequence:
>196_residues MMQNKLSFHQSSASLEIIGLPDYSNNEKKDQISIISQWKLTLVDKPLIEGKIEHLGPIMDAFYIYSNLLIKNEIPIYESK LIDIKADNLHTHNIVLKSSKTNVKPLVLKIGNSLLSDTLNCFDQLNESPKVRIKKTDIRTNIPKKLRLGLNKKINFFNFF IPPFFAICSLILFSSSFIYFYSPFENIEKKELINSE
Sequences:
>Translated_196_residues MMQNKLSFHQSSASLEIIGLPDYSNNEKKDQISIISQWKLTLVDKPLIEGKIEHLGPIMDAFYIYSNLLIKNEIPIYESK LIDIKADNLHTHNIVLKSSKTNVKPLVLKIGNSLLSDTLNCFDQLNESPKVRIKKTDIRTNIPKKLRLGLNKKINFFNFF IPPFFAICSLILFSSSFIYFYSPFENIEKKELINSE >Mature_196_residues MMQNKLSFHQSSASLEIIGLPDYSNNEKKDQISIISQWKLTLVDKPLIEGKIEHLGPIMDAFYIYSNLLIKNEIPIYESK LIDIKADNLHTHNIVLKSSKTNVKPLVLKIGNSLLSDTLNCFDQLNESPKVRIKKTDIRTNIPKKLRLGLNKKINFFNFF IPPFFAICSLILFSSSFIYFYSPFENIEKKELINSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22613; Mature: 22613
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMQNKLSFHQSSASLEIIGLPDYSNNEKKDQISIISQWKLTLVDKPLIEGKIEHLGPIMD CCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHEEEEEECCCHHHCCHHHHHHHHH AFYIYSNLLIKNEIPIYESKLIDIKADNLHTHNIVLKSSKTNVKPLVLKIGNSLLSDTLN HHHHHHHHHCCCCCCCCCCEEEEEECCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHH CFDQLNESPKVRIKKTDIRTNIPKKLRLGLNKKINFFNFFIPPFFAICSLILFSSSFIYF HHHHCCCCCCEEEEECCCCCCCCHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHCCCEEEE YSPFENIEKKELINSE ECCHHCCCHHHHCCCC >Mature Secondary Structure MMQNKLSFHQSSASLEIIGLPDYSNNEKKDQISIISQWKLTLVDKPLIEGKIEHLGPIMD CCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHEEEEEECCCHHHCCHHHHHHHHH AFYIYSNLLIKNEIPIYESKLIDIKADNLHTHNIVLKSSKTNVKPLVLKIGNSLLSDTLN HHHHHHHHHCCCCCCCCCCEEEEEECCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHH CFDQLNESPKVRIKKTDIRTNIPKKLRLGLNKKINFFNFFIPPFFAICSLILFSSSFIYF HHHHCCCCCCEEEEECCCCCCCCHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHCCCEEEE YSPFENIEKKELINSE ECCHHCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA