Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
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Accession | NC_009091 |
Length | 1,641,879 |
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The map label for this gene is pykF [H]
Identifier: 126696285
GI number: 126696285
Start: 815554
End: 817344
Strand: Reverse
Name: pykF [H]
Synonym: P9301_09471
Alternate gene names: 126696285
Gene position: 817344-815554 (Counterclockwise)
Preceding gene: 126696287
Following gene: 126696284
Centisome position: 49.78
GC content: 33.72
Gene sequence:
>1791_bases ATGTCGAATATTGATTTAAAAAGAAGAACAAAAATAGTAGCAACTATTGGCCCTGCAACTCAATCTGAAGAGATAATTAC AAATTTAATTAAAGCTGGAGTAACAACATTCAGATTAAATTTCTCACATGGCGATCATAAAGATCATGCTGATAGAATAA AAACCATAAGGGAAGTATCAAAAAAGTTAGATATAGATATTGGGATATTGCAAGATCTACAAGGACCTAAAATAAGATTA GGGCGCTTTAAAGATGGGCCAGTAAAAGTTAAAAAAGGCGATAAATTCACACTTACATCAAATGAAGTCGAATGTACGAA TACTATTGCAAATGTTACCTACGAAAAACTTTCTCAAGAAGTTAGCGAAGGAAAAAGAATACTTTTAGATGATGGAAAAA TAGAAATGATTGTAGAAAAAGTTGATACAAAAGCTAATAATTTGGAGTGCATGGTAACTGTAGGAGGGGTTCTTTCAAAC AATAAAGGTGTTAATTTTCCAGATGTTCAATTATCAGTAAAAGCATTAACAGAAAAAGATAAAAAGGATTTAAAATTTGG ATTATCTGAAGGAGTTGATTGGATCGCACTAAGTTTTGTAAGAAATCCATCCGATATAAATGAGATAAAAGATTTAATAA ATAAAAATGGTCATTCAACTCCTGTAGTCGCAAAAATAGAAAAATTTGAAGCAATCGATCAGATCGATACAGTATTACCC TTATGTGATGGGGTTATGGTTGCAAGAGGTGATTTGGGAGTAGAAATGCCTGCCGAAGAAGTTCCTCTTTTACAAAAGGA ATTAATAAGAAAAGCTAATTCATTAGGTATCCCAATAATTACAGCGACTCAAATGCTTGATTCAATGGCTTCTAACCCAA GACCAACCAGGGCCGAAGTTAGTGATGTTGCAAATGCAATTCTGGATGGTACAGATGCAGTAATGCTTTCAAACGAAACT GCAGTTGGCGATTATCCTGTGGAGGCAGTTGAAACGATGGCAACTATAGCAAGAAGAATTGAAAGGGATTATCCACTTAA GGCTATTGAAAGCCACTTACCCAGTACGATCCCAAATGCTATTAGCGCAGCAGTAAGCAATATAGCTAGACAACTTGAAG CAGGAGCTATAATCCCTTTAACTAAATCAGGTTCTACCGCTCGAAATGTAAGTAAGTTCAGACCACCAACACCCATCTTG GCAACTACTACAGAAAGAAGTGTAGCGAGAAGATTGCAACTTGTTTGGGGAGTTACTCCAATAGTAGTTAAAAATGATGA AAGAACAGCAAAAACTTTTAGTTTAGCTATGCAAATTGCTCAAGAGATGGGGATCCTTAATCAAGGAGATTTAGTAGTTC AAACCGCAGGTACATTAACTGGAATTAGTGGCTCTACAGATTTAATAAAAGTCGGTTTAGTAAGAAGGATTGTATCAAGA GGAATTTCAATAGGGGAAATCGGTGTTACAGGTAAAGCAAGAATAATTAAAAATAATCTTGATATATCTTTAATTTGCCC AGGTGAAATATTATTTGTTCCGAAGGAATTAATGAAAAATATTCCACTGAGTAAAAATATTGCAGGCATTGTTACGAACC AAAATGTAAATGATGTTTATGCTTTTTTTAACAAAAATAATAAAAAGATTTCTACAATTTGTAATTTAGAAAATATGGAT AGTCATCAAATCAGTAATGGAGATCTCATTACTCTCCAGCTTAATGAAGGTGTCATATACATGGGCCAAATTGAAGATGA TGATGCAATAGATAAATATAAATATGTCTAG
Upstream 100 bases:
>100_bases TGTTTCTCTAGCTTTTTTCTGATAAGTTTTAAAATCCATGACTTAAATAACTAACTTTGGGTATGGTAAATTTATTTATA TCTAGCAATATTATCTATAT
Downstream 100 bases:
>100_bases GAATATTTCAATAAAAGAAGCCTTAGGCATGGCAACAAAAACTTTAGTTTCGAACAAATTGAGAAGTTCGTTAACAATGC TTGGGATAATTATAGGAAAT
Product: pyruvate kinase
Products: NA
Alternate protein names: PK 2 [H]
Number of amino acids: Translated: 596; Mature: 595
Protein sequence:
>596_residues MSNIDLKRRTKIVATIGPATQSEEIITNLIKAGVTTFRLNFSHGDHKDHADRIKTIREVSKKLDIDIGILQDLQGPKIRL GRFKDGPVKVKKGDKFTLTSNEVECTNTIANVTYEKLSQEVSEGKRILLDDGKIEMIVEKVDTKANNLECMVTVGGVLSN NKGVNFPDVQLSVKALTEKDKKDLKFGLSEGVDWIALSFVRNPSDINEIKDLINKNGHSTPVVAKIEKFEAIDQIDTVLP LCDGVMVARGDLGVEMPAEEVPLLQKELIRKANSLGIPIITATQMLDSMASNPRPTRAEVSDVANAILDGTDAVMLSNET AVGDYPVEAVETMATIARRIERDYPLKAIESHLPSTIPNAISAAVSNIARQLEAGAIIPLTKSGSTARNVSKFRPPTPIL ATTTERSVARRLQLVWGVTPIVVKNDERTAKTFSLAMQIAQEMGILNQGDLVVQTAGTLTGISGSTDLIKVGLVRRIVSR GISIGEIGVTGKARIIKNNLDISLICPGEILFVPKELMKNIPLSKNIAGIVTNQNVNDVYAFFNKNNKKISTICNLENMD SHQISNGDLITLQLNEGVIYMGQIEDDDAIDKYKYV
Sequences:
>Translated_596_residues MSNIDLKRRTKIVATIGPATQSEEIITNLIKAGVTTFRLNFSHGDHKDHADRIKTIREVSKKLDIDIGILQDLQGPKIRL GRFKDGPVKVKKGDKFTLTSNEVECTNTIANVTYEKLSQEVSEGKRILLDDGKIEMIVEKVDTKANNLECMVTVGGVLSN NKGVNFPDVQLSVKALTEKDKKDLKFGLSEGVDWIALSFVRNPSDINEIKDLINKNGHSTPVVAKIEKFEAIDQIDTVLP LCDGVMVARGDLGVEMPAEEVPLLQKELIRKANSLGIPIITATQMLDSMASNPRPTRAEVSDVANAILDGTDAVMLSNET AVGDYPVEAVETMATIARRIERDYPLKAIESHLPSTIPNAISAAVSNIARQLEAGAIIPLTKSGSTARNVSKFRPPTPIL ATTTERSVARRLQLVWGVTPIVVKNDERTAKTFSLAMQIAQEMGILNQGDLVVQTAGTLTGISGSTDLIKVGLVRRIVSR GISIGEIGVTGKARIIKNNLDISLICPGEILFVPKELMKNIPLSKNIAGIVTNQNVNDVYAFFNKNNKKISTICNLENMD SHQISNGDLITLQLNEGVIYMGQIEDDDAIDKYKYV >Mature_595_residues SNIDLKRRTKIVATIGPATQSEEIITNLIKAGVTTFRLNFSHGDHKDHADRIKTIREVSKKLDIDIGILQDLQGPKIRLG RFKDGPVKVKKGDKFTLTSNEVECTNTIANVTYEKLSQEVSEGKRILLDDGKIEMIVEKVDTKANNLECMVTVGGVLSNN KGVNFPDVQLSVKALTEKDKKDLKFGLSEGVDWIALSFVRNPSDINEIKDLINKNGHSTPVVAKIEKFEAIDQIDTVLPL CDGVMVARGDLGVEMPAEEVPLLQKELIRKANSLGIPIITATQMLDSMASNPRPTRAEVSDVANAILDGTDAVMLSNETA VGDYPVEAVETMATIARRIERDYPLKAIESHLPSTIPNAISAAVSNIARQLEAGAIIPLTKSGSTARNVSKFRPPTPILA TTTERSVARRLQLVWGVTPIVVKNDERTAKTFSLAMQIAQEMGILNQGDLVVQTAGTLTGISGSTDLIKVGLVRRIVSRG ISIGEIGVTGKARIIKNNLDISLICPGEILFVPKELMKNIPLSKNIAGIVTNQNVNDVYAFFNKNNKKISTICNLENMDS HQISNGDLITLQLNEGVIYMGQIEDDDAIDKYKYV
Specific function: Glycolysis; final step. [C]
COG id: COG0469
COG function: function code G; Pyruvate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the PEP- utilizing enzyme family [H]
Homologues:
Organism=Homo sapiens, GI33286418, Length=488, Percent_Identity=39.5491803278689, Blast_Score=329, Evalue=4e-90, Organism=Homo sapiens, GI10835121, Length=490, Percent_Identity=38.9795918367347, Blast_Score=324, Evalue=1e-88, Organism=Homo sapiens, GI33286422, Length=488, Percent_Identity=38.9344262295082, Blast_Score=324, Evalue=1e-88, Organism=Homo sapiens, GI33286420, Length=488, Percent_Identity=38.9344262295082, Blast_Score=324, Evalue=1e-88, Organism=Homo sapiens, GI32967597, Length=490, Percent_Identity=38.9795918367347, Blast_Score=324, Evalue=1e-88, Organism=Homo sapiens, GI310128732, Length=289, Percent_Identity=39.4463667820069, Blast_Score=197, Evalue=2e-50, Organism=Homo sapiens, GI310128730, Length=289, Percent_Identity=39.4463667820069, Blast_Score=197, Evalue=2e-50, Organism=Homo sapiens, GI310128736, Length=237, Percent_Identity=36.2869198312236, Blast_Score=146, Evalue=7e-35, Organism=Homo sapiens, GI310128734, Length=237, Percent_Identity=36.2869198312236, Blast_Score=146, Evalue=7e-35, Organism=Homo sapiens, GI310128738, Length=216, Percent_Identity=35.1851851851852, Blast_Score=125, Evalue=1e-28, Organism=Escherichia coli, GI1787965, Length=469, Percent_Identity=43.7100213219616, Blast_Score=357, Evalue=1e-99, Organism=Escherichia coli, GI1788160, Length=473, Percent_Identity=41.8604651162791, Blast_Score=321, Evalue=1e-88, Organism=Caenorhabditis elegans, GI17544584, Length=481, Percent_Identity=38.2536382536383, Blast_Score=323, Evalue=1e-88, Organism=Caenorhabditis elegans, GI71984406, Length=487, Percent_Identity=39.8357289527721, Blast_Score=305, Evalue=5e-83, Organism=Caenorhabditis elegans, GI71984413, Length=487, Percent_Identity=39.8357289527721, Blast_Score=305, Evalue=6e-83, Organism=Caenorhabditis elegans, GI17506829, Length=487, Percent_Identity=39.8357289527721, Blast_Score=305, Evalue=6e-83, Organism=Caenorhabditis elegans, GI17506831, Length=487, Percent_Identity=39.8357289527721, Blast_Score=303, Evalue=1e-82, Organism=Saccharomyces cerevisiae, GI6319279, Length=486, Percent_Identity=38.8888888888889, Blast_Score=299, Evalue=9e-82, Organism=Saccharomyces cerevisiae, GI6324923, Length=478, Percent_Identity=37.6569037656904, Blast_Score=293, Evalue=6e-80, Organism=Drosophila melanogaster, GI24648964, Length=491, Percent_Identity=38.9002036659878, Blast_Score=315, Evalue=4e-86, Organism=Drosophila melanogaster, GI28571814, Length=491, Percent_Identity=38.9002036659878, Blast_Score=315, Evalue=5e-86, Organism=Drosophila melanogaster, GI24648966, Length=406, Percent_Identity=39.9014778325123, Blast_Score=287, Evalue=1e-77, Organism=Drosophila melanogaster, GI24581235, Length=486, Percent_Identity=33.1275720164609, Blast_Score=259, Evalue=3e-69, Organism=Drosophila melanogaster, GI24646914, Length=270, Percent_Identity=40.3703703703704, Blast_Score=191, Evalue=2e-48,
Paralogues:
None
Copy number: 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 124 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008279 - InterPro: IPR001697 - InterPro: IPR015813 - InterPro: IPR011037 - InterPro: IPR015794 - InterPro: IPR018209 - InterPro: IPR015793 - InterPro: IPR015795 - InterPro: IPR015806 [H]
Pfam domain/function: PF00391 PEP-utilizers; PF00224 PK; PF02887 PK_C [H]
EC number: =2.7.1.40 [H]
Molecular weight: Translated: 65053; Mature: 64922
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNIDLKRRTKIVATIGPATQSEEIITNLIKAGVTTFRLNFSHGDHKDHADRIKTIREVS CCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHH KKLDIDIGILQDLQGPKIRLGRFKDGPVKVKKGDKFTLTSNEVECTNTIANVTYEKLSQE HHCCCCEEHHHCCCCCCEEECCCCCCCEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHH VSEGKRILLDDGKIEMIVEKVDTKANNLECMVTVGGVLSNNKGVNFPDVQLSVKALTEKD HHCCCEEEEECCCEEEEEEHHCCCCCCEEEEEEECCEEECCCCCCCCCCEEEHHHHHCCC KKDLKFGLSEGVDWIALSFVRNPSDINEIKDLINKNGHSTPVVAKIEKFEAIDQIDTVLP HHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHH LCDGVMVARGDLGVEMPAEEVPLLQKELIRKANSLGIPIITATQMLDSMASNPRPTRAEV HHCCEEEEECCCCCCCCHHHCCHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCCCHHHH SDVANAILDGTDAVMLSNETAVGDYPVEAVETMATIARRIERDYPLKAIESHLPSTIPNA HHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHH ISAAVSNIARQLEAGAIIPLTKSGSTARNVSKFRPPTPILATTTERSVARRLQLVWGVTP HHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHCCCCCCEEEECCHHHHHHHHHHHHCCCE IVVKNDERTAKTFSLAMQIAQEMGILNQGDLVVQTAGTLTGISGSTDLIKVGLVRRIVSR EEEECCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCEECCCCCHHHHHHHHHHHHHHC GISIGEIGVTGKARIIKNNLDISLICPGEILFVPKELMKNIPLSKNIAGIVTNQNVNDVY CCCEEEECCCCCEEEEECCCCEEEECCCCEEEECHHHHHCCCCCCCCEEEEECCCCCCEE AFFNKNNKKISTICNLENMDSHQISNGDLITLQLNEGVIYMGQIEDDDAIDKYKYV EEECCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCHHHCCC >Mature Secondary Structure SNIDLKRRTKIVATIGPATQSEEIITNLIKAGVTTFRLNFSHGDHKDHADRIKTIREVS CCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHH KKLDIDIGILQDLQGPKIRLGRFKDGPVKVKKGDKFTLTSNEVECTNTIANVTYEKLSQE HHCCCCEEHHHCCCCCCEEECCCCCCCEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHH VSEGKRILLDDGKIEMIVEKVDTKANNLECMVTVGGVLSNNKGVNFPDVQLSVKALTEKD HHCCCEEEEECCCEEEEEEHHCCCCCCEEEEEEECCEEECCCCCCCCCCEEEHHHHHCCC KKDLKFGLSEGVDWIALSFVRNPSDINEIKDLINKNGHSTPVVAKIEKFEAIDQIDTVLP HHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHH LCDGVMVARGDLGVEMPAEEVPLLQKELIRKANSLGIPIITATQMLDSMASNPRPTRAEV HHCCEEEEECCCCCCCCHHHCCHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCCCHHHH SDVANAILDGTDAVMLSNETAVGDYPVEAVETMATIARRIERDYPLKAIESHLPSTIPNA HHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHH ISAAVSNIARQLEAGAIIPLTKSGSTARNVSKFRPPTPILATTTERSVARRLQLVWGVTP HHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHCCCCCCEEEECCHHHHHHHHHHHHCCCE IVVKNDERTAKTFSLAMQIAQEMGILNQGDLVVQTAGTLTGISGSTDLIKVGLVRRIVSR EEEECCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCEECCCCCHHHHHHHHHHHHHHC GISIGEIGVTGKARIIKNNLDISLICPGEILFVPKELMKNIPLSKNIAGIVTNQNVNDVY CCCEEEECCCCCEEEEECCCCEEEECCCCEEEECHHHHHCCCCCCCCEEEEECCCCCCEE AFFNKNNKKISTICNLENMDSHQISNGDLITLQLNEGVIYMGQIEDDDAIDKYKYV EEECCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]