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The map label for this gene is salY [H]

Identifier: 126696284

GI number: 126696284

Start: 814329

End: 815561

Strand: Reverse

Name: salY [H]

Synonym: P9301_09461

Alternate gene names: 126696284

Gene position: 815561-814329 (Counterclockwise)

Preceding gene: 126696285

Following gene: 126696283

Centisome position: 49.67

GC content: 32.77

Gene sequence:

>1233_bases
ATGTCTAGGAATATTTCAATAAAAGAAGCCTTAGGCATGGCAACAAAAACTTTAGTTTCGAACAAATTGAGAAGTTCGTT
AACAATGCTTGGGATAATTATAGGAAATGCCTCAGTTATTACACTTGTTGGACTTGGTAGAGGTGCTCAAACATTAGCAA
AGAACCAATTAAGTAATTTAGGTGCCAATGTTTTATTTATCGTTCCAGGAAATAATGACACAAGAAGAAGGGGTATTTCA
TTTCCTAAAAACCTAGTTTTAGAAGATGCAATAGCAATAAGCAACCAAGTACCAACAGTTAAAAAAGTAGCTCCTCAAAT
CTCTGCTAACGAAATAGTGCAATCAAATTCTAAAAGTTTAAATATATCAATTGCTGGTGTTACTCCTGAATTTCTTGAAG
TAAGAAGCTTTGAAGTTGATAAGGGTAGATTTCTATCAAAAAGTGATGTTAATAGTGCAAGAAGTTATGTTGTGATAGGT
CCTGATCTTAAAGATGAATTTTTCAAAGATAAATCTTCATCACTTGGAAAAAAAATCAGAATTAAAGACCATACTTATGA
AATTATCGGAATATTAAAACCCAAAGGTGCTGTATTTGGAAGTAATCAAGACAAAAATGCTTATATTCCATTAACCACAA
TGGTCAATAGGATTACAGGAAAGGACCCGACATATGGAGTAAGTTTAAGCTTCATAAGTGTTGAAGCGATAAATAAAAAT
GCAACTAGTGCTGCTAAATTTCAGATTACTAATTTATTAAGGCAAAGACATAAAATAATAAGAGATGATGACTTTGCGGT
TAGATCGCAAGAAGATGCGCTGAATATAGTAACCAACATAACAAGTGGATTAACGTTTTTATTGGCTGGTATTGGTGCAG
TATCTTTAGTGGTTGGAGGCATAGGAATCATGAATATTATGCTAGTTTCTGTAAGCGAAAGGACTGAAGAGATTGGACTT
AGAAAAGCAATAGGAGCTAAACAGTCAGATATATTAATTCAATTTTTAATTGAGGCATTGATTTTATCTACAATTGGAGG
ATTAATTGGAACAACAACTGGATTATCAGGTGTTTTTCTTTTATCTCTGATAACACCTCTTCCTGCATCGGTAGGAATTA
CAACTACTTTTTCCACCATGATCATTTCAGGATCAATAGGTTTAATCTTTGGCGTTTTACCTGCAAAAAGAGCTTCTAAA
TTAGATCCAATTGTTGCATTAAGAAGTTTATAA

Upstream 100 bases:

>100_bases
CATCAAATCAGTAATGGAGATCTCATTACTCTCCAGCTTAATGAAGGTGTCATATACATGGGCCAAATTGAAGATGATGA
TGCAATAGATAAATATAAAT

Downstream 100 bases:

>100_bases
ATAGAATTTATAATAATGCTCAATTTTTATAAATTAATTGAGATACTGGTGAGTCTTCAATCACTTGTAATAACATCAAT
GATACCTGTTTATATTCCTC

Product: putative ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 410; Mature: 409

Protein sequence:

>410_residues
MSRNISIKEALGMATKTLVSNKLRSSLTMLGIIIGNASVITLVGLGRGAQTLAKNQLSNLGANVLFIVPGNNDTRRRGIS
FPKNLVLEDAIAISNQVPTVKKVAPQISANEIVQSNSKSLNISIAGVTPEFLEVRSFEVDKGRFLSKSDVNSARSYVVIG
PDLKDEFFKDKSSSLGKKIRIKDHTYEIIGILKPKGAVFGSNQDKNAYIPLTTMVNRITGKDPTYGVSLSFISVEAINKN
ATSAAKFQITNLLRQRHKIIRDDDFAVRSQEDALNIVTNITSGLTFLLAGIGAVSLVVGGIGIMNIMLVSVSERTEEIGL
RKAIGAKQSDILIQFLIEALILSTIGGLIGTTTGLSGVFLLSLITPLPASVGITTTFSTMIISGSIGLIFGVLPAKRASK
LDPIVALRSL

Sequences:

>Translated_410_residues
MSRNISIKEALGMATKTLVSNKLRSSLTMLGIIIGNASVITLVGLGRGAQTLAKNQLSNLGANVLFIVPGNNDTRRRGIS
FPKNLVLEDAIAISNQVPTVKKVAPQISANEIVQSNSKSLNISIAGVTPEFLEVRSFEVDKGRFLSKSDVNSARSYVVIG
PDLKDEFFKDKSSSLGKKIRIKDHTYEIIGILKPKGAVFGSNQDKNAYIPLTTMVNRITGKDPTYGVSLSFISVEAINKN
ATSAAKFQITNLLRQRHKIIRDDDFAVRSQEDALNIVTNITSGLTFLLAGIGAVSLVVGGIGIMNIMLVSVSERTEEIGL
RKAIGAKQSDILIQFLIEALILSTIGGLIGTTTGLSGVFLLSLITPLPASVGITTTFSTMIISGSIGLIFGVLPAKRASK
LDPIVALRSL
>Mature_409_residues
SRNISIKEALGMATKTLVSNKLRSSLTMLGIIIGNASVITLVGLGRGAQTLAKNQLSNLGANVLFIVPGNNDTRRRGISF
PKNLVLEDAIAISNQVPTVKKVAPQISANEIVQSNSKSLNISIAGVTPEFLEVRSFEVDKGRFLSKSDVNSARSYVVIGP
DLKDEFFKDKSSSLGKKIRIKDHTYEIIGILKPKGAVFGSNQDKNAYIPLTTMVNRITGKDPTYGVSLSFISVEAINKNA
TSAAKFQITNLLRQRHKIIRDDDFAVRSQEDALNIVTNITSGLTFLLAGIGAVSLVVGGIGIMNIMLVSVSERTEEIGLR
KAIGAKQSDILIQFLIEALILSTIGGLIGTTTGLSGVFLLSLITPLPASVGITTTFSTMIISGSIGLIFGVLPAKRASKL
DPIVALRSL

Specific function: Part of the ABC transporter complex MacAB involved in macrolide export. Transmembrane domains (TMD) form a pore in the membrane and the ATP-binding domain (NBD) is responsible for energy generation [H]

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Escherichia coli, GI1787105, Length=405, Percent_Identity=34.8148148148148, Blast_Score=213, Evalue=2e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR017911
- InterPro:   IPR003593
- InterPro:   IPR003838 [H]

Pfam domain/function: PF00005 ABC_tran; PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 43736; Mature: 43605

Theoretical pI: Translated: 10.67; Mature: 10.67

Prosite motif: PS00053 RIBOSOMAL_S8

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRNISIKEALGMATKTLVSNKLRSSLTMLGIIIGNASVITLVGLGRGAQTLAKNQLSNL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEHEECCCEEEEEEECCCCHHHHHHHHHHHC
GANVLFIVPGNNDTRRRGISFPKNLVLEDAIAISNQVPTVKKVAPQISANEIVQSNSKSL
CCCEEEEEECCCCHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHCCCCEE
NISIAGVTPEFLEVRSFEVDKGRFLSKSDVNSARSYVVIGPDLKDEFFKDKSSSLGKKIR
EEEEECCCHHHHHHHCEECCCCCCCCCCCCCCCCCEEEECCCCHHHHHCCCHHCCCCEEE
IKDHTYEIIGILKPKGAVFGSNQDKNAYIPLTTMVNRITGKDPTYGVSLSFISVEAINKN
EECCCEEEEEEECCCCCEECCCCCCCEEEEHHHHHHHHCCCCCCCEEEEEEEEEEEECCC
ATSAAKFQITNLLRQRHKIIRDDDFAVRSQEDALNIVTNITSGLTFLLAGIGAVSLVVGG
CCHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGIMNIMLVSVSERTEEIGLRKAIGAKQSDILIQFLIEALILSTIGGLIGTTTGLSGVFL
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LSLITPLPASVGITTTFSTMIISGSIGLIFGVLPAKRASKLDPIVALRSL
HHHHHCCCCCCCCHHHHHHHEEECCHHHHHCCCCCHHHCCCCHHHHHHCC
>Mature Secondary Structure 
SRNISIKEALGMATKTLVSNKLRSSLTMLGIIIGNASVITLVGLGRGAQTLAKNQLSNL
CCCCCHHHHHHHHHHHHHHHHHHHHHHEEEHEECCCEEEEEEECCCCHHHHHHHHHHHC
GANVLFIVPGNNDTRRRGISFPKNLVLEDAIAISNQVPTVKKVAPQISANEIVQSNSKSL
CCCEEEEEECCCCHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHCCCCEE
NISIAGVTPEFLEVRSFEVDKGRFLSKSDVNSARSYVVIGPDLKDEFFKDKSSSLGKKIR
EEEEECCCHHHHHHHCEECCCCCCCCCCCCCCCCCEEEECCCCHHHHHCCCHHCCCCEEE
IKDHTYEIIGILKPKGAVFGSNQDKNAYIPLTTMVNRITGKDPTYGVSLSFISVEAINKN
EECCCEEEEEEECCCCCEECCCCCCCEEEEHHHHHHHHCCCCCCCEEEEEEEEEEEECCC
ATSAAKFQITNLLRQRHKIIRDDDFAVRSQEDALNIVTNITSGLTFLLAGIGAVSLVVGG
CCHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGIMNIMLVSVSERTEEIGLRKAIGAKQSDILIQFLIEALILSTIGGLIGTTTGLSGVFL
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LSLITPLPASVGITTTFSTMIISGSIGLIFGVLPAKRASKLDPIVALRSL
HHHHHCCCCCCCCHHHHHHHEEECCHHHHHCCCCCHHHCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA