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The map label for this gene is hcaE [C]

Identifier: 126696207

GI number: 126696207

Start: 752828

End: 754150

Strand: Reverse

Name: hcaE [C]

Synonym: P9301_08691

Alternate gene names: 126696207

Gene position: 754150-752828 (Counterclockwise)

Preceding gene: 126696209

Following gene: 126696206

Centisome position: 45.93

GC content: 28.12

Gene sequence:

>1323_bases
ATGGAAAACAGACAAATTAATTTTTTTAAATCAAAAGACTTTAATACCGTTCTTAAGCCATTTAAAAAAGGAACGGTAGT
AAAAATTGACTCGTTTGATATTAGAGAAAATCAAAAAGAATTAAATATAGGTTTATTTGGTTGGTATGCAATTTGTCCCT
CTAAAGAACTAAAAAAAAATAAGCTTTATTATTTTTCACTCTATGATGAGCCGCTTGTTCTTTATAGAGATGAAAATAAA
AACGTAAGGTGTATTAAAAATATTTGTCCACACCGAGGAGCCTCCTTTTTTGGAGGAACATTATCAGGTGGAGTAATAAC
CTGCCCATATCATGGAGCTAAGTTTTCATCTGGAGGAAGTTGCCAAAATCTCGACAGAATAACATGTCGCCATATAGTTG
ATAATAACTACGATAACTACGCTAAAAGAATTCATTTATCTCAATACAAAACCTCAGAAAAAAATGGATATATTTTTGTA
CATTTTTCTAAAAAATCTGAGACTGATTTAAATAACATAAATGAAGATACACCTGTAAGTAACTACGAATTATATGAAAA
TGGATTTGCACATAAGGATTATGTCTTTGAGGAGGTATTAGTTGACTTTAAATGTGATTGGTCAAGGATTATTGAAAATC
ACCTAGATATTCTTCATATCTTTTGGGTTCATGGCGATACAATTCCTGATAAAGATGTGAATAAAAACGTACTTGTTAGT
TTTAACCAGAAAATTAATATTAATCCCAAATACATTGAAAGTATTTATTATTACAAGAATGACCCTACAAAAGAATTTAT
TCGGATAAAATACATACCTCCAGGAAGGATATTAATCTACAAAGGTGATCCTTCCTCATCAAGATATTTACAAGTTTTAG
ATCATATTCCTCTAGGAAAAAACAAAGCAAGAGTAATAGTAAGACACTATAGGAAATTTCTACAAAATAAACTACTTAAT
AACCTCTTATTATTTAAAGAGACTCAAAGAAAGATTTTTTATAAGATATTTGATGAGGATTATATGATTTTAAAAACACA
AACATATAATCACGATATGGGATTTATTAGTAAGGATGAAATAAAATTATTGGGAGAAGATAGAATAATAAATTATTTTT
GGAAGTGGTACAAGAGGTCTGAAGATAATGATAAACCATGGAAAAATAATAACAAAACCCAAAATCTTGATGTATATGAC
AAAGTGATATTGAAATATCCTCCTGAGATAAAGAAGTTAGAAATTGCAAATAATATAGATATTATTAGAAAAACAATCGT
AAGATTTGCTGCTCCGCTTATATTTTTCATGTTAATAATATAA

Upstream 100 bases:

>100_bases
TGCTACAAATAATAGAGAATTTTCTTTTTATAAGAAATTGATTATTTACTTGGGTTATAGTTCCGAAAGATAAACAGTCA
TTTAAAAAAGAAATTAATTT

Downstream 100 bases:

>100_bases
TTTATGAAGAAAGTAAATAGACCTTCATGGTTGAATTGGCTTTATCTATTTATATTTATTTTAAGTTCGATTCAATTGAT
TATATTCTGGAGTAATAAGT

Product: Rieske iron-sulfur protein 2Fe-2S subunit

Products: NA

Alternate protein names: Rieske Iron-Sulfur S Subunit; Rieske Domain Protein; Vanillate O-Demethylase Oxygenase Subunit; Rieske 2Fe-2S Family Protein; Rieske Protein; Oxidase-Related Protein; Pheophorbide A Oxygenase; Phenylpropionate Dioxygenase; Rieske Iron-Sulphur Domain Protein; Vanillate Demethylase A; Vanillate Monooxygenase Oxygenase Subunit; Vanillate Demethylase Oxygenase Subunit; Rieske Iron-Sulfur Protein; Pheophorbide A Oxygenase Family; Dioxygenase Rieske Iron-Sulfur Component; Ring-Hydroxylating Dioxygenase Large Terminal Subunit; Rieske Iron-Sulfur Domain Protein; Rieske Iron-Sulfur Domain-Containing Protein; Rieske 2Fe-2S Domain-Containing Protein

Number of amino acids: Translated: 440; Mature: 440

Protein sequence:

>440_residues
MENRQINFFKSKDFNTVLKPFKKGTVVKIDSFDIRENQKELNIGLFGWYAICPSKELKKNKLYYFSLYDEPLVLYRDENK
NVRCIKNICPHRGASFFGGTLSGGVITCPYHGAKFSSGGSCQNLDRITCRHIVDNNYDNYAKRIHLSQYKTSEKNGYIFV
HFSKKSETDLNNINEDTPVSNYELYENGFAHKDYVFEEVLVDFKCDWSRIIENHLDILHIFWVHGDTIPDKDVNKNVLVS
FNQKININPKYIESIYYYKNDPTKEFIRIKYIPPGRILIYKGDPSSSRYLQVLDHIPLGKNKARVIVRHYRKFLQNKLLN
NLLLFKETQRKIFYKIFDEDYMILKTQTYNHDMGFISKDEIKLLGEDRIINYFWKWYKRSEDNDKPWKNNNKTQNLDVYD
KVILKYPPEIKKLEIANNIDIIRKTIVRFAAPLIFFMLII

Sequences:

>Translated_440_residues
MENRQINFFKSKDFNTVLKPFKKGTVVKIDSFDIRENQKELNIGLFGWYAICPSKELKKNKLYYFSLYDEPLVLYRDENK
NVRCIKNICPHRGASFFGGTLSGGVITCPYHGAKFSSGGSCQNLDRITCRHIVDNNYDNYAKRIHLSQYKTSEKNGYIFV
HFSKKSETDLNNINEDTPVSNYELYENGFAHKDYVFEEVLVDFKCDWSRIIENHLDILHIFWVHGDTIPDKDVNKNVLVS
FNQKININPKYIESIYYYKNDPTKEFIRIKYIPPGRILIYKGDPSSSRYLQVLDHIPLGKNKARVIVRHYRKFLQNKLLN
NLLLFKETQRKIFYKIFDEDYMILKTQTYNHDMGFISKDEIKLLGEDRIINYFWKWYKRSEDNDKPWKNNNKTQNLDVYD
KVILKYPPEIKKLEIANNIDIIRKTIVRFAAPLIFFMLII
>Mature_440_residues
MENRQINFFKSKDFNTVLKPFKKGTVVKIDSFDIRENQKELNIGLFGWYAICPSKELKKNKLYYFSLYDEPLVLYRDENK
NVRCIKNICPHRGASFFGGTLSGGVITCPYHGAKFSSGGSCQNLDRITCRHIVDNNYDNYAKRIHLSQYKTSEKNGYIFV
HFSKKSETDLNNINEDTPVSNYELYENGFAHKDYVFEEVLVDFKCDWSRIIENHLDILHIFWVHGDTIPDKDVNKNVLVS
FNQKININPKYIESIYYYKNDPTKEFIRIKYIPPGRILIYKGDPSSSRYLQVLDHIPLGKNKARVIVRHYRKFLQNKLLN
NLLLFKETQRKIFYKIFDEDYMILKTQTYNHDMGFISKDEIKLLGEDRIINYFWKWYKRSEDNDKPWKNNNKTQNLDVYD
KVILKYPPEIKKLEIANNIDIIRKTIVRFAAPLIFFMLII

Specific function: Unknown

COG id: COG4638

COG function: function code PR; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.14.1.- [C]

Molecular weight: Translated: 52283; Mature: 52283

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENRQINFFKSKDFNTVLKPFKKGTVVKIDSFDIRENQKELNIGLFGWYAICPSKELKKN
CCCCEEEEEECCCCHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEEEEEEECCCHHHCCC
KLYYFSLYDEPLVLYRDENKNVRCIKNICPHRGASFFGGTLSGGVITCPYHGAKFSSGGS
EEEEEEEECCCEEEEECCCCCCHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCC
CQNLDRITCRHIVDNNYDNYAKRIHLSQYKTSEKNGYIFVHFSKKSETDLNNINEDTPVS
CCCCHHHHHHHHHCCCCCHHHHEEEHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCC
NYELYENGFAHKDYVFEEVLVDFKCDWSRIIENHLDILHIFWVHGDTIPDKDVNKNVLVS
CEEHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCEEEEEEEECCCCCCCCCCCCEEEE
FNQKININPKYIESIYYYKNDPTKEFIRIKYIPPGRILIYKGDPSSSRYLQVLDHIPLGK
ECCEECCCHHHEEEEEEECCCCCCCEEEEEEECCCEEEEEECCCCCHHHHHHHHCCCCCC
NKARVIVRHYRKFLQNKLLNNLLLFKETQRKIFYKIFDEDYMILKTQTYNHDMGFISKDE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCEEEEEEEECCCCCCCCCCCC
IKLLGEDRIINYFWKWYKRSEDNDKPWKNNNKTQNLDVYDKVILKYPPEIKKLEIANNID
EEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCHH
IIRKTIVRFAAPLIFFMLII
HHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MENRQINFFKSKDFNTVLKPFKKGTVVKIDSFDIRENQKELNIGLFGWYAICPSKELKKN
CCCCEEEEEECCCCHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEEEEEEECCCHHHCCC
KLYYFSLYDEPLVLYRDENKNVRCIKNICPHRGASFFGGTLSGGVITCPYHGAKFSSGGS
EEEEEEEECCCEEEEECCCCCCHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCC
CQNLDRITCRHIVDNNYDNYAKRIHLSQYKTSEKNGYIFVHFSKKSETDLNNINEDTPVS
CCCCHHHHHHHHHCCCCCHHHHEEEHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCC
NYELYENGFAHKDYVFEEVLVDFKCDWSRIIENHLDILHIFWVHGDTIPDKDVNKNVLVS
CEEHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCEEEEEEEECCCCCCCCCCCCEEEE
FNQKININPKYIESIYYYKNDPTKEFIRIKYIPPGRILIYKGDPSSSRYLQVLDHIPLGK
ECCEECCCHHHEEEEEEECCCCCCCEEEEEEECCCEEEEEECCCCCHHHHHHHHCCCCCC
NKARVIVRHYRKFLQNKLLNNLLLFKETQRKIFYKIFDEDYMILKTQTYNHDMGFISKDE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCEEEEEEEECCCCCCCCCCCC
IKLLGEDRIINYFWKWYKRSEDNDKPWKNNNKTQNLDVYDKVILKYPPEIKKLEIANNID
EEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCHH
IIRKTIVRFAAPLIFFMLII
HHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA