BacMap

Definition	Prochlorococcus marinus str. MIT 9301, complete genome.
Accession	NC_009091
Length	1,641,879

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The map label for this gene is modF [H]

Identifier: 126696206

GI number: 126696206

Start: 751935

End: 752723

Strand: Reverse

Name: modF [H]

Synonym: P9301_08681

Alternate gene names: 126696206

Gene position: 752723-751935 (Counterclockwise)

Preceding gene: 126696207

Following gene: 126696205

Centisome position: 45.85

GC content: 24.59

Gene sequence:

>789_bases
GTGGTTAATAAATTTTGGTTTGAGGCAAAAAATATAAATTGTTTTAAAAATGGCTTTAGAGTATTTAAAGATTTAAATTT
AAAGATAGCGTATTCAGAAAATGTAATATTAATTGGACCAAATGGTTCAGGGAAATCATCCCTAATTGAAATAATTAATA
GGAACATATATCCAGTAGTAGCTAGTGAATCGAAACTGAAGATATTTAACAAAGAACTTATAAATTTATGGGAACTAAGA
AATAAAATAAGTACCGTAAATAATGATATAAAAAATAGAATAAATCCAAATTTACAAGTTTTTGATTTAATTTTAAGTGG
GCTACATGGAAGATATTGTTACATAGAAAATAAATCTGAAAGAGATTCTTATAGGGTTGAAAGAATCATCAAAAAAATGA
ATATTTCTAATTTATCTAAAAAGAATTTTTCCTATTTATCAGATGGAGAAAAACAAATTTCCCTCATTGCAAGGGCATTA
ATCAAAAAGCCTGAAATCTTAATCTTAGATGAACCAATTTCAAATTTAGATTATAAATCAAAGTTTTTTGTAATTGATAA
AGTTAATGAATTATCAAAATTAAAAACTAAAATTTTATGCGTCACTCATGATATTTCAACGATTACAAAAATTTATGACC
GGGTCATAATGCTAAAAGAAGGCAAAATAATCGCTGATGGAGATCAAAATAAGGTTATAAATAGTGAAAATCTTAATAAG
TTATTTGGTATTCAAGTAGAGGTAACTAATAATAATGGAGTTTGGAATATAAACAGATTATCTAAATAA

Upstream 100 bases:

>100_bases
TGAAGAAAGTAAATAGACCTTCATGGTTGAATTGGCTTTATCTATTTATATTTATTTTAAGTTCGATTCAATTGATTATA
TTCTGGAGTAATAAGTTTTA

Downstream 100 bases:

>100_bases
CAACTATAAATATAGCTATCGCAATAACAAGAAATACTAATTTTTTACTTTTTAAAAATGAAGAGGATTTATTTTTAAAT
GAAGAAGATCCACATTTAGA

Product: ABC transporter ATPase

Products: ADP; phosphate; iron (III) hydroxamate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MVNKFWFEAKNINCFKNGFRVFKDLNLKIAYSENVILIGPNGSGKSSLIEIINRNIYPVVASESKLKIFNKELINLWELR
NKISTVNNDIKNRINPNLQVFDLILSGLHGRYCYIENKSERDSYRVERIIKKMNISNLSKKNFSYLSDGEKQISLIARAL
IKKPEILILDEPISNLDYKSKFFVIDKVNELSKLKTKILCVTHDISTITKIYDRVIMLKEGKIIADGDQNKVINSENLNK
LFGIQVEVTNNNGVWNINRLSK

Sequences:

>Translated_262_residues
MVNKFWFEAKNINCFKNGFRVFKDLNLKIAYSENVILIGPNGSGKSSLIEIINRNIYPVVASESKLKIFNKELINLWELR
NKISTVNNDIKNRINPNLQVFDLILSGLHGRYCYIENKSERDSYRVERIIKKMNISNLSKKNFSYLSDGEKQISLIARAL
IKKPEILILDEPISNLDYKSKFFVIDKVNELSKLKTKILCVTHDISTITKIYDRVIMLKEGKIIADGDQNKVINSENLNK
LFGIQVEVTNNNGVWNINRLSK
>Mature_262_residues
MVNKFWFEAKNINCFKNGFRVFKDLNLKIAYSENVILIGPNGSGKSSLIEIINRNIYPVVASESKLKIFNKELINLWELR
NKISTVNNDIKNRINPNLQVFDLILSGLHGRYCYIENKSERDSYRVERIIKKMNISNLSKKNFSYLSDGEKQISLIARAL
IKKPEILILDEPISNLDYKSKFFVIDKVNELSKLKTKILCVTHDISTITKIYDRVIMLKEGKIIADGDQNKVINSENLNK
LFGIQVEVTNNNGVWNINRLSK

Specific function: Part Of The Binding-Protein-Dependent Transport System For Iron(III)-Ferrichrome. Probably Responsible For Energy Coupling To The Transport System. [C]

COG id: COG1119

COG function: function code P; ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA

Gene ontology:

Cell location: Inner Membrane-Associated [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI255708477, Length=230, Percent_Identity=29.5652173913043, Blast_Score=81, Evalue=8e-16,
Organism=Homo sapiens, GI9955968, Length=252, Percent_Identity=23.015873015873, Blast_Score=72, Evalue=6e-13,
Organism=Homo sapiens, GI9955966, Length=252, Percent_Identity=23.015873015873, Blast_Score=72, Evalue=7e-13,
Organism=Homo sapiens, GI45243524, Length=252, Percent_Identity=23.015873015873, Blast_Score=72, Evalue=7e-13,
Organism=Homo sapiens, GI9961250, Length=233, Percent_Identity=27.8969957081545, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI4505771, Length=233, Percent_Identity=27.8969957081545, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI9961252, Length=233, Percent_Identity=27.8969957081545, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI215820660, Length=217, Percent_Identity=24.8847926267281, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI20143975, Length=217, Percent_Identity=24.8847926267281, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI42741659, Length=232, Percent_Identity=26.7241379310345, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI42490749, Length=230, Percent_Identity=26.5217391304348, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI148612844, Length=224, Percent_Identity=27.6785714285714, Blast_Score=67, Evalue=1e-11,
Organism=Escherichia coli, GI1786345, Length=248, Percent_Identity=25.8064516129032, Blast_Score=94, Evalue=7e-21,
Organism=Escherichia coli, GI1786803, Length=239, Percent_Identity=24.6861924686192, Blast_Score=94, Evalue=9e-21,
Organism=Escherichia coli, GI1789672, Length=222, Percent_Identity=28.3783783783784, Blast_Score=92, Evalue=2e-20,
Organism=Escherichia coli, GI1787089, Length=227, Percent_Identity=26.8722466960352, Blast_Score=92, Evalue=2e-20,
Organism=Escherichia coli, GI1790739, Length=230, Percent_Identity=23.4782608695652, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI1787029, Length=240, Percent_Identity=28.3333333333333, Blast_Score=89, Evalue=4e-19,
Organism=Escherichia coli, GI1788225, Length=230, Percent_Identity=27.3913043478261, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1787370, Length=220, Percent_Identity=26.8181818181818, Blast_Score=86, Evalue=4e-18,
Organism=Escherichia coli, GI1786872, Length=224, Percent_Identity=28.125, Blast_Score=85, Evalue=4e-18,
Organism=Escherichia coli, GI1788506, Length=226, Percent_Identity=26.9911504424779, Blast_Score=85, Evalue=4e-18,
Organism=Escherichia coli, GI1788761, Length=210, Percent_Identity=28.0952380952381, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI1787143, Length=243, Percent_Identity=27.5720164609054, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1790544, Length=238, Percent_Identity=24.7899159663866, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1787712, Length=220, Percent_Identity=26.8181818181818, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1786253, Length=230, Percent_Identity=25.2173913043478, Blast_Score=78, Evalue=5e-16,
Organism=Escherichia coli, GI1787500, Length=237, Percent_Identity=24.8945147679325, Blast_Score=78, Evalue=6e-16,
Organism=Escherichia coli, GI1790162, Length=229, Percent_Identity=27.5109170305677, Blast_Score=78, Evalue=6e-16,
Organism=Escherichia coli, GI1790467, Length=213, Percent_Identity=27.6995305164319, Blast_Score=78, Evalue=7e-16,
Organism=Escherichia coli, GI1787164, Length=211, Percent_Identity=27.9620853080569, Blast_Score=77, Evalue=8e-16,
Organism=Escherichia coli, GI1789593, Length=235, Percent_Identity=25.1063829787234, Blast_Score=77, Evalue=9e-16,
Organism=Escherichia coli, GI87082267, Length=203, Percent_Identity=27.0935960591133, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1789032, Length=223, Percent_Identity=27.8026905829596, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI87081709, Length=228, Percent_Identity=26.3157894736842, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1787547, Length=240, Percent_Identity=26.25, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1786975, Length=188, Percent_Identity=27.6595744680851, Blast_Score=73, Evalue=1e-14,
Organism=Escherichia coli, GI48994883, Length=220, Percent_Identity=26.8181818181818, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI87081834, Length=217, Percent_Identity=24.8847926267281, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1789991, Length=243, Percent_Identity=23.4567901234568, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1789891, Length=210, Percent_Identity=28.0952380952381, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1786398, Length=221, Percent_Identity=27.6018099547511, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI145693107, Length=244, Percent_Identity=25, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1789963, Length=232, Percent_Identity=25.4310344827586, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI1787758, Length=216, Percent_Identity=24.0740740740741, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI48994997, Length=247, Percent_Identity=21.0526315789474, Blast_Score=67, Evalue=8e-13,
Organism=Escherichia coli, GI1786319, Length=216, Percent_Identity=23.6111111111111, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1789873, Length=220, Percent_Identity=25.4545454545455, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI48995001, Length=230, Percent_Identity=20.4347826086957, Blast_Score=61, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI193211017, Length=240, Percent_Identity=27.9166666666667, Blast_Score=80, Evalue=9e-16,
Organism=Caenorhabditis elegans, GI193211015, Length=240, Percent_Identity=27.9166666666667, Blast_Score=80, Evalue=9e-16,
Organism=Caenorhabditis elegans, GI17569145, Length=237, Percent_Identity=27.8481012658228, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI212646699, Length=234, Percent_Identity=27.3504273504274, Blast_Score=77, Evalue=7e-15,
Organism=Caenorhabditis elegans, GI17565938, Length=232, Percent_Identity=28.448275862069, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17558664, Length=218, Percent_Identity=28.4403669724771, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI71996809, Length=236, Percent_Identity=27.5423728813559, Blast_Score=76, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI115535101, Length=227, Percent_Identity=29.0748898678414, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17541710, Length=230, Percent_Identity=28.2608695652174, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI25146777, Length=228, Percent_Identity=28.9473684210526, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17569143, Length=226, Percent_Identity=26.9911504424779, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI71992290, Length=228, Percent_Identity=27.1929824561404, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17567269, Length=218, Percent_Identity=28.4403669724771, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17567265, Length=228, Percent_Identity=28.0701754385965, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI193202349, Length=234, Percent_Identity=27.3504273504274, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17551702, Length=226, Percent_Identity=27.4336283185841, Blast_Score=68, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17551700, Length=226, Percent_Identity=27.4336283185841, Blast_Score=67, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI71984940, Length=221, Percent_Identity=28.5067873303167, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI193209740, Length=235, Percent_Identity=26.8085106382979, Blast_Score=65, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI193208177, Length=222, Percent_Identity=27.027027027027, Blast_Score=64, Evalue=8e-11,
Organism=Saccharomyces cerevisiae, GI6323217, Length=254, Percent_Identity=30.3149606299213, Blast_Score=81, Evalue=2e-16,
Organism=Saccharomyces cerevisiae, GI6324985, Length=225, Percent_Identity=30.6666666666667, Blast_Score=77, Evalue=4e-15,
Organism=Saccharomyces cerevisiae, GI6321720, Length=217, Percent_Identity=27.1889400921659, Blast_Score=71, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6322980, Length=224, Percent_Identity=24.5535714285714, Blast_Score=68, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6321752, Length=224, Percent_Identity=25.4464285714286, Blast_Score=63, Evalue=5e-11,
Organism=Drosophila melanogaster, GI281363262, Length=241, Percent_Identity=31.5352697095436, Blast_Score=83, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24653245, Length=241, Percent_Identity=31.5352697095436, Blast_Score=83, Evalue=1e-16,
Organism=Drosophila melanogaster, GI85726357, Length=221, Percent_Identity=30.7692307692308, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24659289, Length=231, Percent_Identity=29.004329004329, Blast_Score=77, Evalue=9e-15,
Organism=Drosophila melanogaster, GI23397593, Length=226, Percent_Identity=29.646017699115, Blast_Score=76, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24641565, Length=226, Percent_Identity=27.8761061946903, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI28574533, Length=207, Percent_Identity=24.6376811594203, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI85816269, Length=218, Percent_Identity=23.8532110091743, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24580553, Length=218, Percent_Identity=23.8532110091743, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI85724864, Length=218, Percent_Identity=23.8532110091743, Blast_Score=65, Evalue=5e-11,
Organism=Drosophila melanogaster, GI24580555, Length=218, Percent_Identity=23.8532110091743, Blast_Score=65, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 30245; Mature: 30245

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNKFWFEAKNINCFKNGFRVFKDLNLKIAYSENVILIGPNGSGKSSLIEIINRNIYPVV
CCCCEEEEECCCHHHHHHHHHHHCCCEEEEEECCEEEECCCCCCHHHHHHHHCCCCEEEE
ASESKLKIFNKELINLWELRNKISTVNNDIKNRINPNLQVFDLILSGLHGRYCYIENKSE
ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEECCCCC
RDSYRVERIIKKMNISNLSKKNFSYLSDGEKQISLIARALIKKPEILILDEPISNLDYKS
CHHHHHHHHHHHHCCCCCCCCCCCHHCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC
KFFVIDKVNELSKLKTKILCVTHDISTITKIYDRVIMLKEGKIIADGDQNKVINSENLNK
EEEEEECHHHHHHHHHEEEEEEECHHHHHHHHHHEEEEECCEEEECCCCCCEECCCCCCE
LFGIQVEVTNNNGVWNINRLSK
EEEEEEEEECCCCEEEECCCCC
>Mature Secondary Structure
MVNKFWFEAKNINCFKNGFRVFKDLNLKIAYSENVILIGPNGSGKSSLIEIINRNIYPVV
CCCCEEEEECCCHHHHHHHHHHHCCCEEEEEECCEEEECCCCCCHHHHHHHHCCCCEEEE
ASESKLKIFNKELINLWELRNKISTVNNDIKNRINPNLQVFDLILSGLHGRYCYIENKSE
ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEECCCCC
RDSYRVERIIKKMNISNLSKKNFSYLSDGEKQISLIARALIKKPEILILDEPISNLDYKS
CHHHHHHHHHHHHCCCCCCCCCCCHHCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC
KFFVIDKVNELSKLKTKILCVTHDISTITKIYDRVIMLKEGKIIADGDQNKVINSENLNK
EEEEEECHHHHHHHHHEEEEEEECHHHHHHHHHHEEEEECCEEEECCCCCCEECCCCCCE
LFGIQVEVTNNNGVWNINRLSK
EEEEEEEEECCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron (III) hydroxamate [Periplasm]; H2O [C]

Specific reaction: ATP + iron (III) hydroxamate [Periplasm] + H2O = ADP + phosphate + iron (III) hydroxamate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1400210; 11337471 [H]