Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
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Accession | NC_009091 |
Length | 1,641,879 |
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The map label for this gene is 126696200
Identifier: 126696200
GI number: 126696200
Start: 747433
End: 748092
Strand: Reverse
Name: 126696200
Synonym: P9301_08621
Alternate gene names: NA
Gene position: 748092-747433 (Counterclockwise)
Preceding gene: 126696201
Following gene: 126696199
Centisome position: 45.56
GC content: 30.15
Gene sequence:
>660_bases ATGAAAATTGCAATTACTGGTGCATCGGGCAAAACAGGATATAGAATCTCCGAAGAAGCAGTTAAAAATGGATATAAAGT AAGGCAAATCATTAGAAAAAATTCAAAAGTCACAGCAGGACTAGAGAGTTTAGAAACAATTAGGGTTTCATTAGACAAAA AAGGAGAACTTGATAAAGCTTTAAAAAACATTGATGCTTTGGTAATTGCGACTGGAGCAAGAGCATCATTAGATTTAACG GGTCCTGCAAAGGTTGATGCATTAGGCGTATACAGGCAATTAGAGAGTTGCAAAAGAGTTGGTATTAAAAGGGTTATTTT AGTTAGTTCCCTTTGTACTGGTAAATTATTTCACCCATTAAACTTATTTGGTTTAATTCTTATTTGGAAGAAAATAGGTG AAAACTTTCTACGAAATTCAAATTTTGAATGGACTATTATTAGACCTGGAGGATTAAAGGAAAATGAAGATATTAAATCA GAAAATATAAATTATTCAAAAGAGGATACTCAATTTAATGGATCAATCCCTAGAAGATTAGTTGCGGAATGTTGCATAGA TTCTTTAAAAAACAAAGAATCCATAAATAAATTAATAGAAGTTACAAGTTCGAATGATAATAAAAAGATATCTTTTAAAA AAGCTATGCAAATGATTTAA
Upstream 100 bases:
>100_bases ATGTTATTTGTGTCGCACTCTTTATCCCAAAAGAAAAAAGAAATTTATATGTAAAAAGCCTTAAGAAATTTATATAATAT TTAAATTAGTTTTTTTAACC
Downstream 100 bases:
>100_bases AAGATGTAAATATATAAATTAAAACTATGAAAATAAATCCCAAAATTGACGCTTTGCAATTAATGCTTACTGATTTAAGA ACTAGAAATGAGCCAATAAG
Product: putative NADH-flavin reductase
Products: NA
Alternate protein names: Nucleoside-Diphosphate-Sugar Epimerase; NADH-Flavin Reductase; NAD Dependent Epimerase/Dehydratase; NmrA Family Protein; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; Nucleoside-Diphosphate-Sugar Epimerases; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase Family; Nucleoside-Diphosphate-Sugar Epimerase-Like; NAD-Dependent Epimerase/Dehydratase Family Protein; NmrA-Like; NAD Dependent Epimerase/Dehydratase Family Protein
Number of amino acids: Translated: 219; Mature: 219
Protein sequence:
>219_residues MKIAITGASGKTGYRISEEAVKNGYKVRQIIRKNSKVTAGLESLETIRVSLDKKGELDKALKNIDALVIATGARASLDLT GPAKVDALGVYRQLESCKRVGIKRVILVSSLCTGKLFHPLNLFGLILIWKKIGENFLRNSNFEWTIIRPGGLKENEDIKS ENINYSKEDTQFNGSIPRRLVAECCIDSLKNKESINKLIEVTSSNDNKKISFKKAMQMI
Sequences:
>Translated_219_residues MKIAITGASGKTGYRISEEAVKNGYKVRQIIRKNSKVTAGLESLETIRVSLDKKGELDKALKNIDALVIATGARASLDLT GPAKVDALGVYRQLESCKRVGIKRVILVSSLCTGKLFHPLNLFGLILIWKKIGENFLRNSNFEWTIIRPGGLKENEDIKS ENINYSKEDTQFNGSIPRRLVAECCIDSLKNKESINKLIEVTSSNDNKKISFKKAMQMI >Mature_219_residues MKIAITGASGKTGYRISEEAVKNGYKVRQIIRKNSKVTAGLESLETIRVSLDKKGELDKALKNIDALVIATGARASLDLT GPAKVDALGVYRQLESCKRVGIKRVILVSSLCTGKLFHPLNLFGLILIWKKIGENFLRNSNFEWTIIRPGGLKENEDIKS ENINYSKEDTQFNGSIPRRLVAECCIDSLKNKESINKLIEVTSSNDNKKISFKKAMQMI
Specific function: Unknown
COG id: COG0702
COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6323737, Length=221, Percent_Identity=29.4117647058824, Blast_Score=69, Evalue=8e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24359; Mature: 24359
Theoretical pI: Translated: 10.32; Mature: 10.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIAITGASGKTGYRISEEAVKNGYKVRQIIRKNSKVTAGLESLETIRVSLDKKGELDKA CEEEEECCCCCCCCEECHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHEECCCCCCHHHH LKNIDALVIATGARASLDLTGPAKVDALGVYRQLESCKRVGIKRVILVSSLCTGKLFHPL HHCCCEEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCHH NLFGLILIWKKIGENFLRNSNFEWTIIRPGGLKENEDIKSENINYSKEDTQFNGSIPRRL HHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH VAECCIDSLKNKESINKLIEVTSSNDNKKISFKKAMQMI HHHHHHHHHCCHHHHHHHHHHCCCCCCCEEHHHHHHHCC >Mature Secondary Structure MKIAITGASGKTGYRISEEAVKNGYKVRQIIRKNSKVTAGLESLETIRVSLDKKGELDKA CEEEEECCCCCCCCEECHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHEECCCCCCHHHH LKNIDALVIATGARASLDLTGPAKVDALGVYRQLESCKRVGIKRVILVSSLCTGKLFHPL HHCCCEEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCHH NLFGLILIWKKIGENFLRNSNFEWTIIRPGGLKENEDIKSENINYSKEDTQFNGSIPRRL HHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH VAECCIDSLKNKESINKLIEVTSSNDNKKISFKKAMQMI HHHHHHHHHCCHHHHHHHHHHCCCCCCCEEHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA