Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
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Accession | NC_009091 |
Length | 1,641,879 |
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The map label for this gene is yhhX [C]
Identifier: 126696181
GI number: 126696181
Start: 731365
End: 732462
Strand: Reverse
Name: yhhX [C]
Synonym: P9301_08431
Alternate gene names: 126696181
Gene position: 732462-731365 (Counterclockwise)
Preceding gene: 126696182
Following gene: 126696180
Centisome position: 44.61
GC content: 31.42
Gene sequence:
>1098_bases ATGAATACTAAAAATAAAAAATTAAAAATAGCAATCGCTGGATTAGGGTTTGGGAAAAAAGTTCATTTAGAGGCATTAAA AGAGTCTGATTACTTAACTCCTGTAGCTATTTATCATTACGAGAAAAAGCAAAAATCGATATTAGAAAAAGAAACAGGCT TAGATTTTTTTCATAATTGGGAAGACTTAGTTAAATCTTCGGAAATTGATGGGATTATAATTGCCACCCCTCCTGAATCA AGATTTAAGTTAGCAAAACAAGCTCTAGAGAATAATAAAAATTTGCTCCTAGAAAAACCCGTTTCATTATCCTCCTCAGA AATTGAAGAGCTTCAGAGAATATCTTTAATTAATAATTTAAGCGTATGTGTTGATTTTGAATATAGAGCAGTACCTCTTT TCCTTCAGACAAAAAAACTTATTGATGAAAATATTTTAGGAGAAATATATTTAGTCAAATTAGATTGGCTAATGGGGAGC AGATCCGATCCTAAAAGAGCTTGGGATTGGTATTCTTTGGAAGAAAAAGGTGGAGGAGTTATTGGCGCTTTAGGTACTCA TGCATTCGATATGTTGAATTGGTTTTTTGGAGAAGCAATAAACGTGTCTGGCAAGTTAGCAACATCAATAAAAAAAAGAC CTTTACCTAATTCATCTGATTTAAATGATGTTACGAGTGAAGATGTATGTTTAGCCAATATAGAAATATCAAACTACAGC TCGAATCTTATTCCATGTCAGGTATCTTTATCATCAATTTCTAAAAATGGTAGAGGATTTAGTTTAGAAATATATGGAAG CGAAGGTTCACTAATTCTTAAAAGCGAAAACCAAAAAGATTATGTACATGGTTTTAATTTAAAATATTCAAACAACGAAA ATAAAATACAAAATCTAACTGCAGATTCAAGTTTTAATTTTGAAAAAACATGGACTGATGGGAGAATAGCTCCAGTTTTG AGAATTCAAAATTTATGGGCTGAGAGTATTTTTAATAAAACACCTATCATTCCAGGCTTATGCGAGGGACTTGCAAGTCA TAAAGTTTGCGAAGCTATAAGAGAATCGTCGAAGAGCGGGTTAAATATAAAAATATAG
Upstream 100 bases:
>100_bases TTCCACAATTCAATTCAAAATGGCAAACTTCTAATAATGATGAACTTATAGATGTTGTTATTGAAAATAGCTGTTCAGAG TTTATTAATAATGGATAAGA
Downstream 100 bases:
>100_bases ATTTTGTATATCTAATTACGTGACATTTGATCCCTCTTTGTACTAAACTCGCGGAAACAAGTGCTTTGTATAGCATCTAA CTTATTTTAATTATGGCCCT
Product: putative oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 365; Mature: 365
Protein sequence:
>365_residues MNTKNKKLKIAIAGLGFGKKVHLEALKESDYLTPVAIYHYEKKQKSILEKETGLDFFHNWEDLVKSSEIDGIIIATPPES RFKLAKQALENNKNLLLEKPVSLSSSEIEELQRISLINNLSVCVDFEYRAVPLFLQTKKLIDENILGEIYLVKLDWLMGS RSDPKRAWDWYSLEEKGGGVIGALGTHAFDMLNWFFGEAINVSGKLATSIKKRPLPNSSDLNDVTSEDVCLANIEISNYS SNLIPCQVSLSSISKNGRGFSLEIYGSEGSLILKSENQKDYVHGFNLKYSNNENKIQNLTADSSFNFEKTWTDGRIAPVL RIQNLWAESIFNKTPIIPGLCEGLASHKVCEAIRESSKSGLNIKI
Sequences:
>Translated_365_residues MNTKNKKLKIAIAGLGFGKKVHLEALKESDYLTPVAIYHYEKKQKSILEKETGLDFFHNWEDLVKSSEIDGIIIATPPES RFKLAKQALENNKNLLLEKPVSLSSSEIEELQRISLINNLSVCVDFEYRAVPLFLQTKKLIDENILGEIYLVKLDWLMGS RSDPKRAWDWYSLEEKGGGVIGALGTHAFDMLNWFFGEAINVSGKLATSIKKRPLPNSSDLNDVTSEDVCLANIEISNYS SNLIPCQVSLSSISKNGRGFSLEIYGSEGSLILKSENQKDYVHGFNLKYSNNENKIQNLTADSSFNFEKTWTDGRIAPVL RIQNLWAESIFNKTPIIPGLCEGLASHKVCEAIRESSKSGLNIKI >Mature_365_residues MNTKNKKLKIAIAGLGFGKKVHLEALKESDYLTPVAIYHYEKKQKSILEKETGLDFFHNWEDLVKSSEIDGIIIATPPES RFKLAKQALENNKNLLLEKPVSLSSSEIEELQRISLINNLSVCVDFEYRAVPLFLQTKKLIDENILGEIYLVKLDWLMGS RSDPKRAWDWYSLEEKGGGVIGALGTHAFDMLNWFFGEAINVSGKLATSIKKRPLPNSSDLNDVTSEDVCLANIEISNYS SNLIPCQVSLSSISKNGRGFSLEIYGSEGSLILKSENQKDYVHGFNLKYSNNENKIQNLTADSSFNFEKTWTDGRIAPVL RIQNLWAESIFNKTPIIPGLCEGLASHKVCEAIRESSKSGLNIKI
Specific function: Unknown
COG id: COG0673
COG function: function code R; Predicted dehydrogenases and related proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gfo/idh/mocA family [H]
Homologues:
Organism=Escherichia coli, GI1789848, Length=247, Percent_Identity=24.6963562753036, Blast_Score=63, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR000683 - InterPro: IPR004104 [H]
Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 40910; Mature: 40910
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTKNKKLKIAIAGLGFGKKVHLEALKESDYLTPVAIYHYEKKQKSILEKETGLDFFHNW CCCCCCEEEEEEEECCCCCEEEHHHHCCCCCCCEEEEEEEHHHHHHHHHHHCCCHHHCCH EDLVKSSEIDGIIIATPPESRFKLAKQALENNKNLLLEKPVSLSSSEIEELQRISLINNL HHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHCCC SVCVDFEYRAVPLFLQTKKLIDENILGEIYLVKLDWLMGSRSDPKRAWDWYSLEEKGGGV EEEEEECCCEEEEEEHHHHHHHHHCCCEEEEEEEEEHHCCCCCCCCCCCCCEECCCCCEE IGALGTHAFDMLNWFFGEAINVSGKLATSIKKRPLPNSSDLNDVTSEDVCLANIEISNYS EEEHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEECCC SNLIPCQVSLSSISKNGRGFSLEIYGSEGSLILKSENQKDYVHGFNLKYSNNENKIQNLT CCEEEEEEEHHHHCCCCCEEEEEEECCCCCEEEECCCCCCCEEEEEEEECCCCCHHHEEE ADSSFNFEKTWTDGRIAPVLRIQNLWAESIFNKTPIIPGLCEGLASHKVCEAIRESSKSG CCCCCCCEEECCCCCEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCC LNIKI CEEEC >Mature Secondary Structure MNTKNKKLKIAIAGLGFGKKVHLEALKESDYLTPVAIYHYEKKQKSILEKETGLDFFHNW CCCCCCEEEEEEEECCCCCEEEHHHHCCCCCCCEEEEEEEHHHHHHHHHHHCCCHHHCCH EDLVKSSEIDGIIIATPPESRFKLAKQALENNKNLLLEKPVSLSSSEIEELQRISLINNL HHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHCCC SVCVDFEYRAVPLFLQTKKLIDENILGEIYLVKLDWLMGSRSDPKRAWDWYSLEEKGGGV EEEEEECCCEEEEEEHHHHHHHHHCCCEEEEEEEEEHHCCCCCCCCCCCCCEECCCCCEE IGALGTHAFDMLNWFFGEAINVSGKLATSIKKRPLPNSSDLNDVTSEDVCLANIEISNYS EEEHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEECCC SNLIPCQVSLSSISKNGRGFSLEIYGSEGSLILKSENQKDYVHGFNLKYSNNENKIQNLT CCEEEEEEEHHHHCCCCCEEEEEEECCCCCEEEECCCCCCCEEEEEEEECCCCCHHHEEE ADSSFNFEKTWTDGRIAPVLRIQNLWAESIFNKTPIIPGLCEGLASHKVCEAIRESSKSG CCCCCCCEEECCCCCEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCC LNIKI CEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]