Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
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Accession | NC_009091 |
Length | 1,641,879 |
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The map label for this gene is cbbA [H]
Identifier: 126696180
GI number: 126696180
Start: 730199
End: 731272
Strand: Reverse
Name: cbbA [H]
Synonym: P9301_08421
Alternate gene names: 126696180
Gene position: 731272-730199 (Counterclockwise)
Preceding gene: 126696181
Following gene: 126696174
Centisome position: 44.54
GC content: 39.01
Gene sequence:
>1074_bases ATGGCCCTCGTTCCACTAAGACTACTTTTAGATCACGCTGCTGAGAATGGTTACGGTATTCCAGCTTTCAATGTTAATAA TCTTGAACAAGTTCAAGCAATCATGGAAGCAGCATATGAAACTGATAGTCCAGTTATCCTCCAAGCTTCAAGAGGGGCAA GAAATTATGCAGGAGAAATTTTCTTACGTCATCTAATCCTTGCCGCTACAGAAACATATCCAAATATTCCAGTTGTAATG CACCAAGACCATGGCAATGAGCCATCAACATGCTATTCAGCAGCAATAAATGGTTTCACATCAGTAATGATGGATGGTTC TCTAGAGGCAGATGCAAAAACACCCGCAAGTTACGAATATAATGTTGCAGTTACTAAAAAAGTTGTAGATTTTGCTCATT CAGTTGGGGTTAGTGTTGAAGGAGAATTAGGTTGCTTAGGTTCATTAGAAACAGGGAAAGGAGAAGCTGAAGATGGTCAT GGTTTTGAAGGTGAACTTTCTACAGATATGCTTTTGACTGATCCTGAAGAAGCTGCAGATTTTGTTGCTAAAACAAAAGT TGATGCATTAGCTATTGCTATAGGTACAAGTCATGGTGCTTATAAATTCACAAGAAAACCTACAGGAGAAGTTCTTGCAA TAAGCAGAATTGCTGAAATTCATAAAGCACTCCCAAATACCCATCTTGTAATGCATGGATCTAGTTCAGTTCCTCAGGAA TGGTTGGATATCATTAACAAATATGGTGGTGAAATCCCTCAAACATATGGTGTTCCTGTTGAAGAGATTCAAGAGGGAAT AAGAAATGGAGTTAGAAAAGTCAACATTGATACCGATAACAGACTTGCTTTCACTGCCGCGGTTAGAGAGGCAGCATTTG CTGATAAGGCAAACTTTGACCCAAGACATTTCAACAAGCCTGCTAGAAAATACATGAAGCAAGTTTGTCTTGATAGATAC AAGCAGTTCTGGTGCGAAGGTCAAGCAAGTAAGATCAAGCAAAACAGCACCAATTACTTTGCGGATCTTTACGCTAAAGG TGATTTAGATCCAAAAGTAAAAGCTACTGTCTAA
Upstream 100 bases:
>100_bases AAATATAGATTTTGTATATCTAATTACGTGACATTTGATCCCTCTTTGTACTAAACTCGCGGAAACAAGTGCTTTGTATA GCATCTAACTTATTTTAATT
Downstream 100 bases:
>100_bases TTTCTTCCCATATTAAATAAAAAAGACCCCCAAAATTGGGGGTCTTTTTTATTTCAATATTAATGATTTTAATGTAAAGA GACCATCAGTCCCACCAATT
Product: fructose-1,6-bisphosphate aldolase
Products: NA
Alternate protein names: FBP aldolase; FBPA; Fructose-1,6-bisphosphate aldolase; Fructose-bisphosphate aldolase class II [H]
Number of amino acids: Translated: 357; Mature: 356
Protein sequence:
>357_residues MALVPLRLLLDHAAENGYGIPAFNVNNLEQVQAIMEAAYETDSPVILQASRGARNYAGEIFLRHLILAATETYPNIPVVM HQDHGNEPSTCYSAAINGFTSVMMDGSLEADAKTPASYEYNVAVTKKVVDFAHSVGVSVEGELGCLGSLETGKGEAEDGH GFEGELSTDMLLTDPEEAADFVAKTKVDALAIAIGTSHGAYKFTRKPTGEVLAISRIAEIHKALPNTHLVMHGSSSVPQE WLDIINKYGGEIPQTYGVPVEEIQEGIRNGVRKVNIDTDNRLAFTAAVREAAFADKANFDPRHFNKPARKYMKQVCLDRY KQFWCEGQASKIKQNSTNYFADLYAKGDLDPKVKATV
Sequences:
>Translated_357_residues MALVPLRLLLDHAAENGYGIPAFNVNNLEQVQAIMEAAYETDSPVILQASRGARNYAGEIFLRHLILAATETYPNIPVVM HQDHGNEPSTCYSAAINGFTSVMMDGSLEADAKTPASYEYNVAVTKKVVDFAHSVGVSVEGELGCLGSLETGKGEAEDGH GFEGELSTDMLLTDPEEAADFVAKTKVDALAIAIGTSHGAYKFTRKPTGEVLAISRIAEIHKALPNTHLVMHGSSSVPQE WLDIINKYGGEIPQTYGVPVEEIQEGIRNGVRKVNIDTDNRLAFTAAVREAAFADKANFDPRHFNKPARKYMKQVCLDRY KQFWCEGQASKIKQNSTNYFADLYAKGDLDPKVKATV >Mature_356_residues ALVPLRLLLDHAAENGYGIPAFNVNNLEQVQAIMEAAYETDSPVILQASRGARNYAGEIFLRHLILAATETYPNIPVVMH QDHGNEPSTCYSAAINGFTSVMMDGSLEADAKTPASYEYNVAVTKKVVDFAHSVGVSVEGELGCLGSLETGKGEAEDGHG FEGELSTDMLLTDPEEAADFVAKTKVDALAIAIGTSHGAYKFTRKPTGEVLAISRIAEIHKALPNTHLVMHGSSSVPQEW LDIINKYGGEIPQTYGVPVEEIQEGIRNGVRKVNIDTDNRLAFTAAVREAAFADKANFDPRHFNKPARKYMKQVCLDRYK QFWCEGQASKIKQNSTNYFADLYAKGDLDPKVKATV
Specific function: Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3- phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis [H]
COG id: COG0191
COG function: function code G; Fructose/tagatose bisphosphate aldolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class II fructose-bisphosphate aldolase family [H]
Homologues:
Organism=Escherichia coli, GI1789526, Length=335, Percent_Identity=35.2238805970149, Blast_Score=160, Evalue=1e-40, Organism=Escherichia coli, GI87082041, Length=329, Percent_Identity=31.6109422492401, Blast_Score=147, Evalue=1e-36, Organism=Escherichia coli, GI1788072, Length=330, Percent_Identity=31.2121212121212, Blast_Score=129, Evalue=4e-31, Organism=Escherichia coli, GI1789293, Length=340, Percent_Identity=24.7058823529412, Blast_Score=78, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6322790, Length=345, Percent_Identity=27.8260869565217, Blast_Score=74, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006412 - InterPro: IPR000771 [H]
Pfam domain/function: PF01116 F_bP_aldolase [H]
EC number: =4.1.2.13 [H]
Molecular weight: Translated: 38970; Mature: 38839
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: PS00602 ALDOLASE_CLASS_II_1 ; PS00806 ALDOLASE_CLASS_II_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALVPLRLLLDHAAENGYGIPAFNVNNLEQVQAIMEAAYETDSPVILQASRGARNYAGEI CCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHH FLRHLILAATETYPNIPVVMHQDHGNEPSTCYSAAINGFTSVMMDGSLEADAKTPASYEY HHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEE NVAVTKKVVDFAHSVGVSVEGELGCLGSLETGKGEAEDGHGFEGELSTDMLLTDPEEAAD EHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECHHHHHH FVAKTKVDALAIAIGTSHGAYKFTRKPTGEVLAISRIAEIHKALPNTHLVMHGSSSVPQE HHHHHHHCEEEEEEECCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCHH WLDIINKYGGEIPQTYGVPVEEIQEGIRNGVRKVNIDTDNRLAFTAAVREAAFADKANFD HHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCEEEECCCCCCEEHHHHHHHHHHHCCCCCC PRHFNKPARKYMKQVCLDRYKQFWCEGQASKIKQNSTNYFADLYAKGDLDPKVKATV HHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEEEEEECCCCCCCCEECC >Mature Secondary Structure ALVPLRLLLDHAAENGYGIPAFNVNNLEQVQAIMEAAYETDSPVILQASRGARNYAGEI CCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHH FLRHLILAATETYPNIPVVMHQDHGNEPSTCYSAAINGFTSVMMDGSLEADAKTPASYEY HHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEE NVAVTKKVVDFAHSVGVSVEGELGCLGSLETGKGEAEDGHGFEGELSTDMLLTDPEEAAD EHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECHHHHHH FVAKTKVDALAIAIGTSHGAYKFTRKPTGEVLAISRIAEIHKALPNTHLVMHGSSSVPQE HHHHHHHCEEEEEEECCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCHH WLDIINKYGGEIPQTYGVPVEEIQEGIRNGVRKVNIDTDNRLAFTAAVREAAFADKANFD HHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCEEEECCCCCCEEHHHHHHHHHHHCCCCCC PRHFNKPARKYMKQVCLDRYKQFWCEGQASKIKQNSTNYFADLYAKGDLDPKVKATV HHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEEEEEECCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231; 9298645 [H]