Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
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Accession | NC_009091 |
Length | 1,641,879 |
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The map label for this gene is 126696123
Identifier: 126696123
GI number: 126696123
Start: 682876
End: 683289
Strand: Reverse
Name: 126696123
Synonym: P9301_07851
Alternate gene names: NA
Gene position: 683289-682876 (Counterclockwise)
Preceding gene: 126696124
Following gene: 126696122
Centisome position: 41.62
GC content: 24.88
Gene sequence:
>414_bases ATGAGCATAAGTAAAATTTTAAATACTCTTGAAAAATCCTGGGAAAGAGATGAGATTCTTTTAAATATAAAGAAGGGGTT GGAGATAGATAAGATAGTAAATGAATTTCTTATTAAAAACGAAAGACAAATTAAAGAATTAAATTCTTTATTAAGGCCAG AAGATATTGAATTATTAAATCAAGTAGAAAAACTCTCAACTTGCGAATCTAAATTAATAAATAAGATTAAAAATTTAAAT TACTTAGAAAATAATGAAAATCATCACATTATGAATAAAAAAAAGATTGTTCCACCTAATAGAGTTTCTCTCAACAAAAT TAGTTCATTCATGATTAATTGGAGTAACAAATTTGTAGTTATTGCTTTACTAACAATTTCAGCCATAGCTTTATCAAAAC AAGCGTGGGCATAA
Upstream 100 bases:
>100_bases TATTAGAAAATCTTAAATAAAAATAATTTTTTCTAATAACTTAAAAGAATAAGCCACAGAAGAAAAAAATAATAATTTAT TATAAGTAAAAATACTTAAA
Downstream 100 bases:
>100_bases TTAGCTAAATTAACTTCATTGTAAGAGATGTAAGTTATGAGAACTAATCAAGAATATTTAATTAGATATAAAGACGGAAA TCTTTATTGTGAACTTGCTG
Product: COMC family protein
Products: NA
Alternate protein names: Comc Family Protein; ComC Family Protein-Like
Number of amino acids: Translated: 137; Mature: 136
Protein sequence:
>137_residues MSISKILNTLEKSWERDEILLNIKKGLEIDKIVNEFLIKNERQIKELNSLLRPEDIELLNQVEKLSTCESKLINKIKNLN YLENNENHHIMNKKKIVPPNRVSLNKISSFMINWSNKFVVIALLTISAIALSKQAWA
Sequences:
>Translated_137_residues MSISKILNTLEKSWERDEILLNIKKGLEIDKIVNEFLIKNERQIKELNSLLRPEDIELLNQVEKLSTCESKLINKIKNLN YLENNENHHIMNKKKIVPPNRVSLNKISSFMINWSNKFVVIALLTISAIALSKQAWA >Mature_136_residues SISKILNTLEKSWERDEILLNIKKGLEIDKIVNEFLIKNERQIKELNSLLRPEDIELLNQVEKLSTCESKLINKIKNLNY LENNENHHIMNKKKIVPPNRVSLNKISSFMINWSNKFVVIALLTISAIALSKQAWA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15938; Mature: 15807
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSISKILNTLEKSWERDEILLNIKKGLEIDKIVNEFLIKNERQIKELNSLLRPEDIELLN CCHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHH QVEKLSTCESKLINKIKNLNYLENNENHHIMNKKKIVPPNRVSLNKISSFMINWSNKFVV HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHH IALLTISAIALSKQAWA HHHHHHHHHHHHHHCCC >Mature Secondary Structure SISKILNTLEKSWERDEILLNIKKGLEIDKIVNEFLIKNERQIKELNSLLRPEDIELLN CHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHH QVEKLSTCESKLINKIKNLNYLENNENHHIMNKKKIVPPNRVSLNKISSFMINWSNKFVV HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHH IALLTISAIALSKQAWA HHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA