Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
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Accession | NC_009091 |
Length | 1,641,879 |
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The map label for this gene is 126696124
Identifier: 126696124
GI number: 126696124
Start: 683374
End: 683655
Strand: Reverse
Name: 126696124
Synonym: P9301_07861
Alternate gene names: NA
Gene position: 683655-683374 (Counterclockwise)
Preceding gene: 126696125
Following gene: 126696123
Centisome position: 41.64
GC content: 25.89
Gene sequence:
>282_bases ATGTCTATCAACACTCCTATTTTCAGTATTGCCAAAGATCTTAATGTCGATAGTAATAGAATATTATTAGCCTGCAAGAA ACTAGGAATAAACGCAAAAGGTGCGACAAAAAGATTAAATGAAGAAGAATTAAAAAAAATTAAAAATTATTTTGCAACGG GCAAAAATGTGTCAGATGAAGTGATCAATTTAAATAAAGTTAAAACTAAAAGTAGTCCAAAAAAAATTGTAGAAAAGGTA AAGATAAAATATTTTGCAAATAGACTTATTAGAAAATCTTAA
Upstream 100 bases:
>100_bases TAATTAAAAAAAGTTTTTAAAATTAATAATAATTAAAAATATATTTTATTTATAACTTATAAATATACTATAAATAATAA ATTTCATAGTATAGAAAATA
Downstream 100 bases:
>100_bases ATAAAAATAATTTTTTCTAATAACTTAAAAGAATAAGCCACAGAAGAAAAAAATAATAATTTATTATAAGTAAAAATACT TAAAATGAGCATAAGTAAAA
Product: major surface glycoprotein
Products: NA
Alternate protein names: Surface Glycoprotein-Like
Number of amino acids: Translated: 93; Mature: 92
Protein sequence:
>93_residues MSINTPIFSIAKDLNVDSNRILLACKKLGINAKGATKRLNEEELKKIKNYFATGKNVSDEVINLNKVKTKSSPKKIVEKV KIKYFANRLIRKS
Sequences:
>Translated_93_residues MSINTPIFSIAKDLNVDSNRILLACKKLGINAKGATKRLNEEELKKIKNYFATGKNVSDEVINLNKVKTKSSPKKIVEKV KIKYFANRLIRKS >Mature_92_residues SINTPIFSIAKDLNVDSNRILLACKKLGINAKGATKRLNEEELKKIKNYFATGKNVSDEVINLNKVKTKSSPKKIVEKVK IKYFANRLIRKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10522; Mature: 10390
Theoretical pI: Translated: 10.91; Mature: 10.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSINTPIFSIAKDLNVDSNRILLACKKLGINAKGATKRLNEEELKKIKNYFATGKNVSDE CCCCCHHHHHHHHCCCCCCCEEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHH VINLNKVKTKSSPKKIVEKVKIKYFANRLIRKS HHCCHHCCCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SINTPIFSIAKDLNVDSNRILLACKKLGINAKGATKRLNEEELKKIKNYFATGKNVSDE CCCCHHHHHHHHCCCCCCCEEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHH VINLNKVKTKSSPKKIVEKVKIKYFANRLIRKS HHCCHHCCCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA