Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
---|---|
Accession | NC_009091 |
Length | 1,641,879 |
Click here to switch to the map view.
The map label for this gene is hslO
Identifier: 126696056
GI number: 126696056
Start: 639245
End: 640153
Strand: Reverse
Name: hslO
Synonym: P9301_07181
Alternate gene names: 126696056
Gene position: 640153-639245 (Counterclockwise)
Preceding gene: 126696057
Following gene: 126696052
Centisome position: 38.99
GC content: 33.11
Gene sequence:
>909_bases ATGCAGGATAGGATAGTACGAGCCACTGCAGCAAATGGTGGAATAAGATTAGTTGCTGTCTTAACAACAGAATCTTCCCT AGAAGCCAAAAAAAGACACGATCTTTCTTATCTAACCACCTGCATCTTAGGGAGAGCATTTAGTGCCTCACTGCTTTTAG CAAGTTCAATGAAGATAATGCATGGAAGAGTAACCCTAAGAGTACGTTCTGACGGACCTTTGAAGGGATTGCTGGTTGAT GCAGGTAGAGACGGTAAAGTCAGAGGATATGTAGGAAATCCTGATTTAGAATTGGATCTAGTCAAAATAGATAGTAATAA ATATTCTTTTGATTTCACAAAAGCATTAGGTACTGGATATTTAAATGTTATTAGAGATAGCGGAATTGGAGAACCCTTTA CAAGCACAGTTGAATTAGTAAATGGGAATATTGCAGAAGACTTAGCTTCATATTTATATCATTCAGAACAAACTCCTTCT GCTGTATTTATTGGAGAAAAAATTCAAAATCAAGGAATTATTTGTAGTGGTGGATTATTAGCTCAAGTTTTACCTAAAAA AGATACTGACCCTTTACTAGTCTCACTACTTGAAGAAAGATGTAAAGAAGTAAATTCTTTTAGCGAAGATCTATTTCAAT CAAAAGATAATCTTCTTTCCTTGATAAAAAAAATATTTCCTGATATCGACGATGAATCAATATCTGAAAAAGCTCGTTCA CAAGAAGTTAGTTTTAAATGCAAGTGTTCTAAACAAAGAAGTTTAAATGCAATGAATATGCTTGATAAGAGCGAGTTGGA GGACATCCTCAAGAAAGATGGCAATGCAGAATTAGTATGTGAATTTTGTAAGAATAAATATCTTATAAATTATGAAGAAA TTAAATTGATGATAGAAAATCAATCATAA
Upstream 100 bases:
>100_bases ATTATTATTGTTACTCATGAACCTGAAATGTTTGAGGGAATTACTTCTAGGATATTATTCTTGGAAAAAGGGAAAATCAA AAATTTTATGAAAGAAAATC
Downstream 100 bases:
>100_bases GAAAATTACGCCTAGCCATAAAATAACCATGGCTGGAATACTTTGAATTTTTTGTATCGATAGAGAATTATTTGAAATTT CCTGAATGAAAGAATTATTT
Product: Hsp33-like chaperonin
Products: NA
Alternate protein names: Heat shock protein 33 homolog; HSP33
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MQDRIVRATAANGGIRLVAVLTTESSLEAKKRHDLSYLTTCILGRAFSASLLLASSMKIMHGRVTLRVRSDGPLKGLLVD AGRDGKVRGYVGNPDLELDLVKIDSNKYSFDFTKALGTGYLNVIRDSGIGEPFTSTVELVNGNIAEDLASYLYHSEQTPS AVFIGEKIQNQGIICSGGLLAQVLPKKDTDPLLVSLLEERCKEVNSFSEDLFQSKDNLLSLIKKIFPDIDDESISEKARS QEVSFKCKCSKQRSLNAMNMLDKSELEDILKKDGNAELVCEFCKNKYLINYEEIKLMIENQS
Sequences:
>Translated_302_residues MQDRIVRATAANGGIRLVAVLTTESSLEAKKRHDLSYLTTCILGRAFSASLLLASSMKIMHGRVTLRVRSDGPLKGLLVD AGRDGKVRGYVGNPDLELDLVKIDSNKYSFDFTKALGTGYLNVIRDSGIGEPFTSTVELVNGNIAEDLASYLYHSEQTPS AVFIGEKIQNQGIICSGGLLAQVLPKKDTDPLLVSLLEERCKEVNSFSEDLFQSKDNLLSLIKKIFPDIDDESISEKARS QEVSFKCKCSKQRSLNAMNMLDKSELEDILKKDGNAELVCEFCKNKYLINYEEIKLMIENQS >Mature_302_residues MQDRIVRATAANGGIRLVAVLTTESSLEAKKRHDLSYLTTCILGRAFSASLLLASSMKIMHGRVTLRVRSDGPLKGLLVD AGRDGKVRGYVGNPDLELDLVKIDSNKYSFDFTKALGTGYLNVIRDSGIGEPFTSTVELVNGNIAEDLASYLYHSEQTPS AVFIGEKIQNQGIICSGGLLAQVLPKKDTDPLLVSLLEERCKEVNSFSEDLFQSKDNLLSLIKKIFPDIDDESISEKARS QEVSFKCKCSKQRSLNAMNMLDKSELEDILKKDGNAELVCEFCKNKYLINYEEIKLMIENQS
Specific function: Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
COG id: COG1281
COG function: function code O; Disulfide bond chaperones of the HSP33 family
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HSP33 family
Homologues:
Organism=Escherichia coli, GI87082260, Length=303, Percent_Identity=24.0924092409241, Blast_Score=96, Evalue=2e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HSLO_PROM0 (A3PC66)
Other databases:
- EMBL: CP000576 - RefSeq: YP_001090942.1 - ProteinModelPortal: A3PC66 - SMR: A3PC66 - STRING: A3PC66 - GeneID: 4912641 - GenomeReviews: CP000576_GR - KEGG: pmg:P9301_07181 - eggNOG: COG1281 - HOGENOM: HBG286231 - OMA: VMLGRAM - ProtClustDB: PRK00114 - BioCyc: PMAR167546:P9301ORF_0732-MONOMER - GO: GO:0005737 - HAMAP: MF_00117 - InterPro: IPR000397 - InterPro: IPR016154 - InterPro: IPR016153 - Gene3D: G3DSA:3.90.1280.10 - Gene3D: G3DSA:3.55.30.10 - PIRSF: PIRSF005261
Pfam domain/function: PF01430 HSP33; SSF64397 Heat_shock_Hsp33_N
EC number: NA
Molecular weight: Translated: 33458; Mature: 33458
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQDRIVRATAANGGIRLVAVLTTESSLEAKKRHDLSYLTTCILGRAFSASLLLASSMKIM CCCCEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE HGRVTLRVRSDGPLKGLLVDAGRDGKVRGYVGNPDLELDLVKIDSNKYSFDFTKALGTGY ECEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCEEEEHHHHHCCHH LNVIRDSGIGEPFTSTVELVNGNIAEDLASYLYHSEQTPSAVFIGEKIQNQGIICSGGLL HHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEEHHHCCCCEEECCCHH AQVLPKKDTDPLLVSLLEERCKEVNSFSEDLFQSKDNLLSLIKKIFPDIDDESISEKARS HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHH QEVSFKCKCSKQRSLNAMNMLDKSELEDILKKDGNAELVCEFCKNKYLINYEEIKLMIEN CCCEEEEECCHHHCCHHHHHCCHHHHHHHHHCCCCHHHHHHHHCCCEEEEHHHEEEEEEC QS CC >Mature Secondary Structure MQDRIVRATAANGGIRLVAVLTTESSLEAKKRHDLSYLTTCILGRAFSASLLLASSMKIM CCCCEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE HGRVTLRVRSDGPLKGLLVDAGRDGKVRGYVGNPDLELDLVKIDSNKYSFDFTKALGTGY ECEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCEEEEHHHHHCCHH LNVIRDSGIGEPFTSTVELVNGNIAEDLASYLYHSEQTPSAVFIGEKIQNQGIICSGGLL HHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEEHHHCCCCEEECCCHH AQVLPKKDTDPLLVSLLEERCKEVNSFSEDLFQSKDNLLSLIKKIFPDIDDESISEKARS HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHH QEVSFKCKCSKQRSLNAMNMLDKSELEDILKKDGNAELVCEFCKNKYLINYEEIKLMIEN CCCEEEEECCHHHCCHHHHHCCHHHHHHHHHCCCCHHHHHHHHCCCEEEEHHHEEEEEEC QS CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA