Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
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Accession | NC_009091 |
Length | 1,641,879 |
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The map label for this gene is 126696051
Identifier: 126696051
GI number: 126696051
Start: 633346
End: 633603
Strand: Reverse
Name: 126696051
Synonym: P9301_07131
Alternate gene names: NA
Gene position: 633603-633346 (Counterclockwise)
Preceding gene: 126696052
Following gene: 126696049
Centisome position: 38.59
GC content: 30.62
Gene sequence:
>258_bases ATGACATTAAGCTTAAATATTGGGAACTTCTTTAACGATTCCTCCAGTCATGCATTGGTGGACGAGCTAAGAAAAAGAAC ATCAGAAGAGGATATCTTAGATTTTGAGGAAAAATTTAACTCCAAAAACGAAAAAAATCTACACGTATATATATGTAGAT TTCTAAAAAATAGATCAATATCCAGAGGGCTAGCCTCTAGATGGTTAATAACCATAATTGAAAACAAAGAATCAAAAATT GATGCTTTGCAAAAATAA
Upstream 100 bases:
>100_bases CCAAAAGACTAGATATTAAGTTATTTGTAAATAAAAAATATAAATTAGTTTTTAAAAATTTAATTTATGGCTACCTCTTA AATAGGGACATAAATTATTT
Downstream 100 bases:
>100_bases AATATTTAGGTCAGCCCTGATAGTTTCCATAGAGCAATTCCAAAAATTGAGAATCCCATAATAAAAGTAAAAGCCAAAGC ATTTACCAATTGGACCTTAT
Product: RNA recognition motif-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 85; Mature: 84
Protein sequence:
>85_residues MTLSLNIGNFFNDSSSHALVDELRKRTSEEDILDFEEKFNSKNEKNLHVYICRFLKNRSISRGLASRWLITIIENKESKI DALQK
Sequences:
>Translated_85_residues MTLSLNIGNFFNDSSSHALVDELRKRTSEEDILDFEEKFNSKNEKNLHVYICRFLKNRSISRGLASRWLITIIENKESKI DALQK >Mature_84_residues TLSLNIGNFFNDSSSHALVDELRKRTSEEDILDFEEKFNSKNEKNLHVYICRFLKNRSISRGLASRWLITIIENKESKID ALQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9960; Mature: 9829
Theoretical pI: Translated: 8.51; Mature: 8.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLSLNIGNFFNDSSSHALVDELRKRTSEEDILDFEEKFNSKNEKNLHVYICRFLKNRSI CEEECCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCH SRGLASRWLITIIENKESKIDALQK HHHHHHHHEEHEECCCCHHHHHCCC >Mature Secondary Structure TLSLNIGNFFNDSSSHALVDELRKRTSEEDILDFEEKFNSKNEKNLHVYICRFLKNRSI EEECCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCH SRGLASRWLITIIENKESKIDALQK HHHHHHHHEEHEECCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA