Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
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Accession | NC_009091 |
Length | 1,641,879 |
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The map label for this gene is 126696039
Identifier: 126696039
GI number: 126696039
Start: 625916
End: 626542
Strand: Reverse
Name: 126696039
Synonym: P9301_07011
Alternate gene names: NA
Gene position: 626542-625916 (Counterclockwise)
Preceding gene: 126696042
Following gene: 126696038
Centisome position: 38.16
GC content: 37.96
Gene sequence:
>627_bases ATGGTTAAATCTTTTTTTGTTAGAGCTCTGTCTCCAAAAATCAGGTTTGAAAAAATCAAGAACCTAACTTCATTAAGAGA ATTAAAAGATGAAGAGGGCTTCACACTTGTAGAATTAATTGTAGTAGTGATGATGATTGGAATCCTTTCATCAATTGCAA TCCCTCAATTTATGACTGCTGCCGATAAAGCAAAACAAAAAGAGGCAACAGGCATAGTAGCTGCTCTAGTTAAAGCTGCC ACAGCATTTCAAACAGAATATGGTGATTTACCTACTGATGCAGGGGACATAGAAGAGTATGCTAGATTTCAAAGATGTAA TCAAACTGGTATGGAAACTGAAGGTGGAAAAGTTTGTAAAGGAACTGACCCTGTAGAAGTTCCAGGAACAGCAACTTCTT TTTATTCAACATCAGGTAATTATTTGATTGAATTTCAAACCGCCGACGTTAATAGCGATACTGTTTTTCAGGTAAGAGCA CAACCAAATGGTGGTGCATATGCAAATAATGGTAGTGCTGTCACTGGATGTTATAACCCAGTCGATGCGACTTCAAAAGT GTACGAAAAAACTGCAAAAGCAGCAGATAGAGGAAGATTGACCGACTGGAGTGATGCAGAGTGTTGA
Upstream 100 bases:
>100_bases TCATTAATCAAAAAACATTAATTAGGCAATTATTAATTACTTTATTGTCATGTTTTCAAATAATAAGTATTATTGAAATT AGATAATAATTTTTTTAGGA
Downstream 100 bases:
>100_bases TTAGGGTAAGTTAAATTTAATTCAAGTAATATTATTATATTTTTTATTTTGCACTCACTAATTTGAAAATGCGTTTTTCA AAGAAAGTTTCAAGCAATAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 208; Mature: 208
Protein sequence:
>208_residues MVKSFFVRALSPKIRFEKIKNLTSLRELKDEEGFTLVELIVVVMMIGILSSIAIPQFMTAADKAKQKEATGIVAALVKAA TAFQTEYGDLPTDAGDIEEYARFQRCNQTGMETEGGKVCKGTDPVEVPGTATSFYSTSGNYLIEFQTADVNSDTVFQVRA QPNGGAYANNGSAVTGCYNPVDATSKVYEKTAKAADRGRLTDWSDAEC
Sequences:
>Translated_208_residues MVKSFFVRALSPKIRFEKIKNLTSLRELKDEEGFTLVELIVVVMMIGILSSIAIPQFMTAADKAKQKEATGIVAALVKAA TAFQTEYGDLPTDAGDIEEYARFQRCNQTGMETEGGKVCKGTDPVEVPGTATSFYSTSGNYLIEFQTADVNSDTVFQVRA QPNGGAYANNGSAVTGCYNPVDATSKVYEKTAKAADRGRLTDWSDAEC >Mature_208_residues MVKSFFVRALSPKIRFEKIKNLTSLRELKDEEGFTLVELIVVVMMIGILSSIAIPQFMTAADKAKQKEATGIVAALVKAA TAFQTEYGDLPTDAGDIEEYARFQRCNQTGMETEGGKVCKGTDPVEVPGTATSFYSTSGNYLIEFQTADVNSDTVFQVRA QPNGGAYANNGSAVTGCYNPVDATSKVYEKTAKAADRGRLTDWSDAEC
Specific function: Unknown
COG id: COG2165
COG function: function code NU; Type II secretory pathway, pseudopilin PulG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22513; Mature: 22513
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKSFFVRALSPKIRFEKIKNLTSLRELKDEEGFTLVELIVVVMMIGILSSIAIPQFMTA CCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ADKAKQKEATGIVAALVKAATAFQTEYGDLPTDAGDIEEYARFQRCNQTGMETEGGKVCK HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEC GTDPVEVPGTATSFYSTSGNYLIEFQTADVNSDTVFQVRAQPNGGAYANNGSAVTGCYNP CCCCCCCCCCCCCEEECCCCEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCEEECCCCC VDATSKVYEKTAKAADRGRLTDWSDAEC CHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MVKSFFVRALSPKIRFEKIKNLTSLRELKDEEGFTLVELIVVVMMIGILSSIAIPQFMTA CCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ADKAKQKEATGIVAALVKAATAFQTEYGDLPTDAGDIEEYARFQRCNQTGMETEGGKVCK HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEC GTDPVEVPGTATSFYSTSGNYLIEFQTADVNSDTVFQVRAQPNGGAYANNGSAVTGCYNP CCCCCCCCCCCCCEEECCCCEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCEEECCCCC VDATSKVYEKTAKAADRGRLTDWSDAEC CHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA