Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
---|---|
Accession | NC_009091 |
Length | 1,641,879 |
Click here to switch to the map view.
The map label for this gene is 126696038
Identifier: 126696038
GI number: 126696038
Start: 623730
End: 625847
Strand: Reverse
Name: 126696038
Synonym: P9301_07001
Alternate gene names: NA
Gene position: 625847-623730 (Counterclockwise)
Preceding gene: 126696039
Following gene: 126696037
Centisome position: 38.12
GC content: 31.11
Gene sequence:
>2118_bases ATGCGTTTTTCAAAGAAAGTTTCAAGCAATAGATCTAGAAAGAATAATAAAGGCTTCGCAATACCTCAGATACTTATCCT AGGTATTGGAATAGCGGTTGGTGTAAGCGGTTTAATGGCCGCATCTATATTAAGTTTGACTGGCTCAAAAATAACAAGAC AAGAACTTTTGGCCAAAGCCTCATCTTATTCTGGAATTACCAAACTCAGAGCATTATTTAACGATAATTCTGAAGGGCGA TTATTTAATTATTTCTGGTTAGTAGATAATTGTTCAGAAAAAGCTGCAGAATGTGAATCTCTAAATATTTCTGATCCAAC CAATCAATATTGGGCCGATGATAGTTGGTGTGATGAGGAGGAGAATTGCAATGGTAGACAAAAAGCACCTGTCTGTATTC CAAGTGAAAATTATTCGTGGGCGAATGAAAAGCAAGTAGTAGAAAACCTTTTTAGAAATTCAAATTATGTAGGAAACACA CTCCCTAATTCAAAAAGAGACTTCGATCAGGCATTCGATTTAATTTCTACTAAATATATAGGAACAGAAGACTCCGGCAT TAACTCTATTTTAATAGAAGGTTTATCAATCCCAAAAGATACTAATAGTATTTCTGGATCAAACAAATTAAGAGTAAACA TTCAAGTTAACAGCGAAACTTCAGAAACAGGATTTGGATTTTTTTCGGCAGGTGAAAATAATTCCGATAAAACAGATTCC CTTTTTATAGGAAATCTTAATATTACTCCTTTTAATGAGGCGAAAGGTTCAATTATTTGGAGGATGAATATTAATAATAA TGATGAATGTCAAGATTTTCAGGAATTGGCAATGGCAGAAAATGCATCATTACCTGCTAACGGTAATGGAGGAATTTGGA TTCAACCATTAAATTTACCAAAACAACCTAGATTAAAAAACGTAATTGATATTGGGACATTAATATGTACCCAAAAAAGA TATGAAGAAAATAATTCAAGTTGTAAATTAAGTGCTGGAAATTCACCTCAAAAAACATTCAGAATATATTCACTTTTTGC TAGAGGGCCAGGATCAAAATTCGAAGTATCTACAACGGATTCATCTAAAATAATTCTGGAAATTATGGGTGATATCGATA TCAGTAATGAAGGGATTTTTTGTCATAAAAATGGATCGGAATCATGTGGGACTGGAAAGCCAGAAAATTTAACAATATTA TTTAAGCAAAGAAACAACTCCAAAATAAATAAACTTGTATGCAATAGAGATAGTAATGAAGGCGGAATAACTCTAAAGAA TAATCATATTTACACTAATATTGGTTATCCAATAGACAATGATAGATTGCCTGGACATAGCTTTTTAATTGATAAAACAG GAGAAAACTCCAATCAGAAATTTGGAGCATTTATTTATGGCCCAAAAACTACTTTTATTTCTGATAAACAAAAAAGTGTA TGGATTCAGAATAATAATTCAAGTATGATAGTTACCTCAAGGGGTTCTTATGGTTATGTTTCAAGTACTAAAGAAGATTC GATTGAAGGTAACATTACGAATTTAATATTGGATTCTGATTTAACACTTATTCCATATGGAGGGAATCAGAGAAATGGGA ATAATCTAGAAATAGTTGGAATAGGTCAGAAAGTTGAAAATATTCCAACAGGTACATTATTTAATACTGCAACTAATAAT GTATTTTTAATCTTTGATAATGCAACCTCAAATTACCACTTAAGAAGTTTCCAGAAATTAAATATTAATCGTTTGAACAG TTCAAATCTTCAATATTCTTATCCAAGAGCATTTGCGATACTAGATCCTAAAAATAATTTCAATGATATAAATCTTGGAA ACAATTTAGATGAAAACTCATTCGCAAATAGTTGGTTAAATGCATTTGATATCGAGGTAAAAGAAACTAATGAAAACTTT GAAAGAAACTTTTCCGGGGCGGTTTGGGTAAAGAATCTTTGCTTTGATGGCAGCGGAGAAAAAAATTGGGAATTCTCAAA AGACTTCATAGATAAATTAGTTTCATGGCATGGTAATAATTTTAATTGGGGAATAAAATACTACAGAGGTAAATCAATTA TTTTATGGGATACCTTAAGAGACTTTAAAAATAATTAA
Upstream 100 bases:
>100_bases GATTGACCGACTGGAGTGATGCAGAGTGTTGATTAGGGTAAGTTAAATTTAATTCAAGTAATATTATTATATTTTTTATT TTGCACTCACTAATTTGAAA
Downstream 100 bases:
>100_bases ATGAAGAAAAAAGAGAATCCAAAGTTAGTTTTTTGTCGAAGTAATAGATTATATGATTATGGATTCGGACTGGTTGATGC AATTTTAAGTATAACTTTAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 705; Mature: 705
Protein sequence:
>705_residues MRFSKKVSSNRSRKNNKGFAIPQILILGIGIAVGVSGLMAASILSLTGSKITRQELLAKASSYSGITKLRALFNDNSEGR LFNYFWLVDNCSEKAAECESLNISDPTNQYWADDSWCDEEENCNGRQKAPVCIPSENYSWANEKQVVENLFRNSNYVGNT LPNSKRDFDQAFDLISTKYIGTEDSGINSILIEGLSIPKDTNSISGSNKLRVNIQVNSETSETGFGFFSAGENNSDKTDS LFIGNLNITPFNEAKGSIIWRMNINNNDECQDFQELAMAENASLPANGNGGIWIQPLNLPKQPRLKNVIDIGTLICTQKR YEENNSSCKLSAGNSPQKTFRIYSLFARGPGSKFEVSTTDSSKIILEIMGDIDISNEGIFCHKNGSESCGTGKPENLTIL FKQRNNSKINKLVCNRDSNEGGITLKNNHIYTNIGYPIDNDRLPGHSFLIDKTGENSNQKFGAFIYGPKTTFISDKQKSV WIQNNNSSMIVTSRGSYGYVSSTKEDSIEGNITNLILDSDLTLIPYGGNQRNGNNLEIVGIGQKVENIPTGTLFNTATNN VFLIFDNATSNYHLRSFQKLNINRLNSSNLQYSYPRAFAILDPKNNFNDINLGNNLDENSFANSWLNAFDIEVKETNENF ERNFSGAVWVKNLCFDGSGEKNWEFSKDFIDKLVSWHGNNFNWGIKYYRGKSIILWDTLRDFKNN
Sequences:
>Translated_705_residues MRFSKKVSSNRSRKNNKGFAIPQILILGIGIAVGVSGLMAASILSLTGSKITRQELLAKASSYSGITKLRALFNDNSEGR LFNYFWLVDNCSEKAAECESLNISDPTNQYWADDSWCDEEENCNGRQKAPVCIPSENYSWANEKQVVENLFRNSNYVGNT LPNSKRDFDQAFDLISTKYIGTEDSGINSILIEGLSIPKDTNSISGSNKLRVNIQVNSETSETGFGFFSAGENNSDKTDS LFIGNLNITPFNEAKGSIIWRMNINNNDECQDFQELAMAENASLPANGNGGIWIQPLNLPKQPRLKNVIDIGTLICTQKR YEENNSSCKLSAGNSPQKTFRIYSLFARGPGSKFEVSTTDSSKIILEIMGDIDISNEGIFCHKNGSESCGTGKPENLTIL FKQRNNSKINKLVCNRDSNEGGITLKNNHIYTNIGYPIDNDRLPGHSFLIDKTGENSNQKFGAFIYGPKTTFISDKQKSV WIQNNNSSMIVTSRGSYGYVSSTKEDSIEGNITNLILDSDLTLIPYGGNQRNGNNLEIVGIGQKVENIPTGTLFNTATNN VFLIFDNATSNYHLRSFQKLNINRLNSSNLQYSYPRAFAILDPKNNFNDINLGNNLDENSFANSWLNAFDIEVKETNENF ERNFSGAVWVKNLCFDGSGEKNWEFSKDFIDKLVSWHGNNFNWGIKYYRGKSIILWDTLRDFKNN >Mature_705_residues MRFSKKVSSNRSRKNNKGFAIPQILILGIGIAVGVSGLMAASILSLTGSKITRQELLAKASSYSGITKLRALFNDNSEGR LFNYFWLVDNCSEKAAECESLNISDPTNQYWADDSWCDEEENCNGRQKAPVCIPSENYSWANEKQVVENLFRNSNYVGNT LPNSKRDFDQAFDLISTKYIGTEDSGINSILIEGLSIPKDTNSISGSNKLRVNIQVNSETSETGFGFFSAGENNSDKTDS LFIGNLNITPFNEAKGSIIWRMNINNNDECQDFQELAMAENASLPANGNGGIWIQPLNLPKQPRLKNVIDIGTLICTQKR YEENNSSCKLSAGNSPQKTFRIYSLFARGPGSKFEVSTTDSSKIILEIMGDIDISNEGIFCHKNGSESCGTGKPENLTIL FKQRNNSKINKLVCNRDSNEGGITLKNNHIYTNIGYPIDNDRLPGHSFLIDKTGENSNQKFGAFIYGPKTTFISDKQKSV WIQNNNSSMIVTSRGSYGYVSSTKEDSIEGNITNLILDSDLTLIPYGGNQRNGNNLEIVGIGQKVENIPTGTLFNTATNN VFLIFDNATSNYHLRSFQKLNINRLNSSNLQYSYPRAFAILDPKNNFNDINLGNNLDENSFANSWLNAFDIEVKETNENF ERNFSGAVWVKNLCFDGSGEKNWEFSKDFIDKLVSWHGNNFNWGIKYYRGKSIILWDTLRDFKNN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 78807; Mature: 78807
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFSKKVSSNRSRKNNKGFAIPQILILGIGIAVGVSGLMAASILSLTGSKITRQELLAKA CCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH SSYSGITKLRALFNDNSEGRLFNYFWLVDNCSEKAAECESLNISDPTNQYWADDSWCDEE HCCCHHHHHHHHHCCCCCCEEEEEEEEEECCCHHHHHHCCCCCCCCCCCCCCCCCCCCCC ENCNGRQKAPVCIPSENYSWANEKQVVENLFRNSNYVGNTLPNSKRDFDQAFDLISTKYI CCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHEEC GTEDSGINSILIEGLSIPKDTNSISGSNKLRVNIQVNSETSETGFGFFSAGENNSDKTDS CCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEECCCCCCCCCCE LFIGNLNITPFNEAKGSIIWRMNINNNDECQDFQELAMAENASLPANGNGGIWIQPLNLP EEEECEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCC KQPRLKNVIDIGTLICTQKRYEENNSSCKLSAGNSPQKTFRIYSLFARGPGSKFEVSTTD CCCCHHHHHHHHHHHCCHHHHCCCCCEEEEECCCCCHHHEEEEEEEECCCCCEEEEECCC SSKIILEIMGDIDISNEGIFCHKNGSESCGTGKPENLTILFKQRNNSKINKLVCNRDSNE CCEEEEEEECCCEECCCCEEEECCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCC GGITLKNNHIYTNIGYPIDNDRLPGHSFLIDKTGENSNQKFGAFIYGPKTTFISDKQKSV CCEEEECCEEEEECCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEECCCEEEECCCCCEE WIQNNNSSMIVTSRGSYGYVSSTKEDSIEGNITNLILDSDLTLIPYGGNQRNGNNLEIVG EEEECCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCEEEEECCCCCCCCCEEEEEE IGQKVENIPTGTLFNTATNNVFLIFDNATSNYHLRSFQKLNINRLNSSNLQYSYPRAFAI CCCHHHCCCCCCEEECCCCCEEEEEECCCCCCEEEEEEECCCEECCCCCCEEECCEEEEE LDPKNNFNDINLGNNLDENSFANSWLNAFDIEVKETNENFERNFSGAVWVKNLCFDGSGE ECCCCCCCCCCCCCCCCCCHHHHHCCCEEEEEEEECCCCHHHCCCCEEEEEEEEECCCCC KNWEFSKDFIDKLVSWHGNNFNWGIKYYRGKSIILWDTLRDFKNN CCCCCCHHHHHHHHHHCCCCEEEEEEEEECCEEEEEECHHHHCCC >Mature Secondary Structure MRFSKKVSSNRSRKNNKGFAIPQILILGIGIAVGVSGLMAASILSLTGSKITRQELLAKA CCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH SSYSGITKLRALFNDNSEGRLFNYFWLVDNCSEKAAECESLNISDPTNQYWADDSWCDEE HCCCHHHHHHHHHCCCCCCEEEEEEEEEECCCHHHHHHCCCCCCCCCCCCCCCCCCCCCC ENCNGRQKAPVCIPSENYSWANEKQVVENLFRNSNYVGNTLPNSKRDFDQAFDLISTKYI CCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHEEC GTEDSGINSILIEGLSIPKDTNSISGSNKLRVNIQVNSETSETGFGFFSAGENNSDKTDS CCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEECCCCCCCCCCE LFIGNLNITPFNEAKGSIIWRMNINNNDECQDFQELAMAENASLPANGNGGIWIQPLNLP EEEECEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCC KQPRLKNVIDIGTLICTQKRYEENNSSCKLSAGNSPQKTFRIYSLFARGPGSKFEVSTTD CCCCHHHHHHHHHHHCCHHHHCCCCCEEEEECCCCCHHHEEEEEEEECCCCCEEEEECCC SSKIILEIMGDIDISNEGIFCHKNGSESCGTGKPENLTILFKQRNNSKINKLVCNRDSNE CCEEEEEEECCCEECCCCEEEECCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCC GGITLKNNHIYTNIGYPIDNDRLPGHSFLIDKTGENSNQKFGAFIYGPKTTFISDKQKSV CCEEEECCEEEEECCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEECCCEEEECCCCCEE WIQNNNSSMIVTSRGSYGYVSSTKEDSIEGNITNLILDSDLTLIPYGGNQRNGNNLEIVG EEEECCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCEEEEECCCCCCCCCEEEEEE IGQKVENIPTGTLFNTATNNVFLIFDNATSNYHLRSFQKLNINRLNSSNLQYSYPRAFAI CCCHHHCCCCCCEEECCCCCEEEEEECCCCCCEEEEEEECCCEECCCCCCEEECCEEEEE LDPKNNFNDINLGNNLDENSFANSWLNAFDIEVKETNENFERNFSGAVWVKNLCFDGSGE ECCCCCCCCCCCCCCCCCCHHHHHCCCEEEEEEEECCCCHHHCCCCEEEEEEEEECCCCC KNWEFSKDFIDKLVSWHGNNFNWGIKYYRGKSIILWDTLRDFKNN CCCCCCHHHHHHHHHHCCCCEEEEEEEEECCEEEEEECHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA