Definition Prochlorococcus marinus str. MIT 9301, complete genome.
Accession NC_009091
Length 1,641,879

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The map label for this gene is 126696039

Identifier: 126696039

GI number: 126696039

Start: 625916

End: 626542

Strand: Reverse

Name: 126696039

Synonym: P9301_07011

Alternate gene names: NA

Gene position: 626542-625916 (Counterclockwise)

Preceding gene: 126696042

Following gene: 126696038

Centisome position: 38.16

GC content: 37.96

Gene sequence:

>627_bases
ATGGTTAAATCTTTTTTTGTTAGAGCTCTGTCTCCAAAAATCAGGTTTGAAAAAATCAAGAACCTAACTTCATTAAGAGA
ATTAAAAGATGAAGAGGGCTTCACACTTGTAGAATTAATTGTAGTAGTGATGATGATTGGAATCCTTTCATCAATTGCAA
TCCCTCAATTTATGACTGCTGCCGATAAAGCAAAACAAAAAGAGGCAACAGGCATAGTAGCTGCTCTAGTTAAAGCTGCC
ACAGCATTTCAAACAGAATATGGTGATTTACCTACTGATGCAGGGGACATAGAAGAGTATGCTAGATTTCAAAGATGTAA
TCAAACTGGTATGGAAACTGAAGGTGGAAAAGTTTGTAAAGGAACTGACCCTGTAGAAGTTCCAGGAACAGCAACTTCTT
TTTATTCAACATCAGGTAATTATTTGATTGAATTTCAAACCGCCGACGTTAATAGCGATACTGTTTTTCAGGTAAGAGCA
CAACCAAATGGTGGTGCATATGCAAATAATGGTAGTGCTGTCACTGGATGTTATAACCCAGTCGATGCGACTTCAAAAGT
GTACGAAAAAACTGCAAAAGCAGCAGATAGAGGAAGATTGACCGACTGGAGTGATGCAGAGTGTTGA

Upstream 100 bases:

>100_bases
TCATTAATCAAAAAACATTAATTAGGCAATTATTAATTACTTTATTGTCATGTTTTCAAATAATAAGTATTATTGAAATT
AGATAATAATTTTTTTAGGA

Downstream 100 bases:

>100_bases
TTAGGGTAAGTTAAATTTAATTCAAGTAATATTATTATATTTTTTATTTTGCACTCACTAATTTGAAAATGCGTTTTTCA
AAGAAAGTTTCAAGCAATAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MVKSFFVRALSPKIRFEKIKNLTSLRELKDEEGFTLVELIVVVMMIGILSSIAIPQFMTAADKAKQKEATGIVAALVKAA
TAFQTEYGDLPTDAGDIEEYARFQRCNQTGMETEGGKVCKGTDPVEVPGTATSFYSTSGNYLIEFQTADVNSDTVFQVRA
QPNGGAYANNGSAVTGCYNPVDATSKVYEKTAKAADRGRLTDWSDAEC

Sequences:

>Translated_208_residues
MVKSFFVRALSPKIRFEKIKNLTSLRELKDEEGFTLVELIVVVMMIGILSSIAIPQFMTAADKAKQKEATGIVAALVKAA
TAFQTEYGDLPTDAGDIEEYARFQRCNQTGMETEGGKVCKGTDPVEVPGTATSFYSTSGNYLIEFQTADVNSDTVFQVRA
QPNGGAYANNGSAVTGCYNPVDATSKVYEKTAKAADRGRLTDWSDAEC
>Mature_208_residues
MVKSFFVRALSPKIRFEKIKNLTSLRELKDEEGFTLVELIVVVMMIGILSSIAIPQFMTAADKAKQKEATGIVAALVKAA
TAFQTEYGDLPTDAGDIEEYARFQRCNQTGMETEGGKVCKGTDPVEVPGTATSFYSTSGNYLIEFQTADVNSDTVFQVRA
QPNGGAYANNGSAVTGCYNPVDATSKVYEKTAKAADRGRLTDWSDAEC

Specific function: Unknown

COG id: COG2165

COG function: function code NU; Type II secretory pathway, pseudopilin PulG

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22513; Mature: 22513

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKSFFVRALSPKIRFEKIKNLTSLRELKDEEGFTLVELIVVVMMIGILSSIAIPQFMTA
CCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ADKAKQKEATGIVAALVKAATAFQTEYGDLPTDAGDIEEYARFQRCNQTGMETEGGKVCK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEC
GTDPVEVPGTATSFYSTSGNYLIEFQTADVNSDTVFQVRAQPNGGAYANNGSAVTGCYNP
CCCCCCCCCCCCCEEECCCCEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCEEECCCCC
VDATSKVYEKTAKAADRGRLTDWSDAEC
CHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MVKSFFVRALSPKIRFEKIKNLTSLRELKDEEGFTLVELIVVVMMIGILSSIAIPQFMTA
CCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ADKAKQKEATGIVAALVKAATAFQTEYGDLPTDAGDIEEYARFQRCNQTGMETEGGKVCK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEC
GTDPVEVPGTATSFYSTSGNYLIEFQTADVNSDTVFQVRAQPNGGAYANNGSAVTGCYNP
CCCCCCCCCCCCCEEECCCCEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCEEECCCCC
VDATSKVYEKTAKAADRGRLTDWSDAEC
CHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA