Click here to switch to the map view.

The map label for this gene is 126696013

Identifier: 126696013

GI number: 126696013

Start: 602142

End: 603782

Strand: Reverse

Name: 126696013

Synonym: P9301_06751

Alternate gene names: NA

Gene position: 603782-602142 (Counterclockwise)

Preceding gene: 126696015

Following gene: 126696010

Centisome position: 36.77

GC content: 35.65

Gene sequence:

>1641_bases
TTGGATATAAGTCCTTATGATGCAATTGTTGTTGGTTCTGGAGCTACAGGAGGAATAGCAGCACTTACATTGGCAGAACA
AGGGATCAAAGTTTTAGTAATAGAAGCAGGGCCTCAAGTTAAAAGGGATGAAGCTAGTAATCATGAGCCAAAAAGTACAT
TAAAAAGATTATCAGGACTAATAACAAAAAAAAATGCCAATCAGTGCCAACATCCTGGTTATTGGAAAAATAATCCTGAC
TTATATTCAAATGAATTGAAGCATCCTTATGACTTCCCAAAAAAAAAGCCATTTCTTTGGACACAAGGTAAACAATTTGG
GGGGAGATCATTAACCTGGGGAGGCATAACTTTAAGACTTTCCTCAGAAGACTTTCATCCAGCTAAAAAAGACGGATTCG
GGCCAAACTGGCCTATCTCGTACGAAGAAATCTCCCCGCACTATGATTTTATTGAAAATTTCTGCGGAATTTATGGCCGA
AAAGATGATATCAAGGAGGTCCCAAACGGTAAATATATTGGTGAGATTCCTCTTACAGAAAACGAAAATGTTTTTGGCAG
CAAAGTTAAATCAAAATTAAACTATCCATTTATCCAATCAAGAGGATTTGACCGTAATTCATCTGTAAAAGAAAAAAATT
GGCCCAAGTCCTCTAGCTTAGGAAGCTCTTTTAAAAAAGCTTTAGATACTGGAAATGTACAAATAATCTCTAATTACCTA
GTGGAGTCTTTTGAGATTAACAAGATAACAGAGCTTGCCTCAAAACTAACGATTGTAAACCTAGAAAATGGATACAAAGA
AGTATTGGATTGTGATTTGATTCTTCTTTGCGCATCAACAATTTCAACATTGAGAATACTATTAAACTCAGAATACAAAT
CAAATTCCTCAGGGTTTAAAGATAATTCTGGGAAATTAGGTAAATATCTAATGGATCACATATCTATATGTAGATTTTTT
TCAGTCCCAAAAGCAAAAAACTCAGATAAATCACTAGATAATCCTCCCGATCTTTCTGGAGCAGGCAGCTTCTTTATTCC
TTTTGGTTCAAATTTGCCAGAAATTGATGACATAAATTTCCATAGAGGTTATGGGATCTGGGGGGCAATTGATAGATTAG
GGATACCTAAATTTTTACAAAAAGACGTAAACAAATCCATTGGCTTTCTTATCGCCCATGGTGAAGTCCTTCCAAGAGAG
AAAAACTCAGTTTCTCTCTCAAGAAAAACAGATGAATGGGGAATACCAATTCCCTACATTGAATTCGAATGGAGCGAGAA
TGAGTTAAATATGGCAAAACATATGGAAAAAACAATACAAAGATCAGTCAAAGCTGCAAATGGGAAAATAAAAAATATTG
ATGAACTAATGAATATTCCACTAGGGAGTTTATTTACAAAAAATTTGATAGCACTTTCAGATAGTCCTCCTCCTCCTGGA
TATTATATTCATGAGGTAGGGGGAGCACCGATGGGGTTAAATGAAGAAAATAGCGTAGTTGATAAATTTAATAGATTGTG
GAGATGTAAGAATGTACTGGTACTAGATGGAGCATGCTGGCCCACATCATCTTGGCAAAGCCCCACACTTACAATGATGG
CCTTGAGTAGAAGAGCCTGTTTAAATATTAAAAAGACTTAG

Upstream 100 bases:

>100_bases
GGTAGTATTTCAATAAATTCTAACTTCTTAAGCTGAAATCTAAAAATTAATTATTTACTGAATGCTATATTTATTGAAAT
AGCAAATCACGAAATAGGTT

Downstream 100 bases:

>100_bases
AGGGTGTAAATAATTGATTTAAATAAATTTCTGAGACAGAATTATCTGTACAACCGTTTTGAACGAGAAAAGTAGCTAAT
GCTGAATTTATAAGCTTATA

Product: glucose-methanol-choline (GMC) oxidoreductase:NAD binding site

Products: NA

Alternate protein names: Oxidoreductase; Choline Dehydrogenase; GMC Family Oxidoreductase; GMC Oxidoreductase Family Protein; Oxidoreductase Protein; Oxidoreductase GMC Family; Glucoside 3-Dehydrogenase; Gluconate 2-Dehydrogenase; Fad Dependent Oxidoreductase; Choline Dehydrogenase And Flavoproteins-Like Protein; FAD Dependent Oxidoreductase; 2-Keto-Gluconate Dehydrogenase; Dehydrogluconate Dehydrogenase; Glucase Dehydrogenase Subunit Alpha; Choline Dehydrogenase-Like Flavoprotein; Oxidoreductase Chain; GMC Oxidoreductase Family; Oxidoreductase GMC Family Protein

Number of amino acids: Translated: 546; Mature: 546

Protein sequence:

>546_residues
MDISPYDAIVVGSGATGGIAALTLAEQGIKVLVIEAGPQVKRDEASNHEPKSTLKRLSGLITKKNANQCQHPGYWKNNPD
LYSNELKHPYDFPKKKPFLWTQGKQFGGRSLTWGGITLRLSSEDFHPAKKDGFGPNWPISYEEISPHYDFIENFCGIYGR
KDDIKEVPNGKYIGEIPLTENENVFGSKVKSKLNYPFIQSRGFDRNSSVKEKNWPKSSSLGSSFKKALDTGNVQIISNYL
VESFEINKITELASKLTIVNLENGYKEVLDCDLILLCASTISTLRILLNSEYKSNSSGFKDNSGKLGKYLMDHISICRFF
SVPKAKNSDKSLDNPPDLSGAGSFFIPFGSNLPEIDDINFHRGYGIWGAIDRLGIPKFLQKDVNKSIGFLIAHGEVLPRE
KNSVSLSRKTDEWGIPIPYIEFEWSENELNMAKHMEKTIQRSVKAANGKIKNIDELMNIPLGSLFTKNLIALSDSPPPPG
YYIHEVGGAPMGLNEENSVVDKFNRLWRCKNVLVLDGACWPTSSWQSPTLTMMALSRRACLNIKKT

Sequences:

>Translated_546_residues
MDISPYDAIVVGSGATGGIAALTLAEQGIKVLVIEAGPQVKRDEASNHEPKSTLKRLSGLITKKNANQCQHPGYWKNNPD
LYSNELKHPYDFPKKKPFLWTQGKQFGGRSLTWGGITLRLSSEDFHPAKKDGFGPNWPISYEEISPHYDFIENFCGIYGR
KDDIKEVPNGKYIGEIPLTENENVFGSKVKSKLNYPFIQSRGFDRNSSVKEKNWPKSSSLGSSFKKALDTGNVQIISNYL
VESFEINKITELASKLTIVNLENGYKEVLDCDLILLCASTISTLRILLNSEYKSNSSGFKDNSGKLGKYLMDHISICRFF
SVPKAKNSDKSLDNPPDLSGAGSFFIPFGSNLPEIDDINFHRGYGIWGAIDRLGIPKFLQKDVNKSIGFLIAHGEVLPRE
KNSVSLSRKTDEWGIPIPYIEFEWSENELNMAKHMEKTIQRSVKAANGKIKNIDELMNIPLGSLFTKNLIALSDSPPPPG
YYIHEVGGAPMGLNEENSVVDKFNRLWRCKNVLVLDGACWPTSSWQSPTLTMMALSRRACLNIKKT
>Mature_546_residues
MDISPYDAIVVGSGATGGIAALTLAEQGIKVLVIEAGPQVKRDEASNHEPKSTLKRLSGLITKKNANQCQHPGYWKNNPD
LYSNELKHPYDFPKKKPFLWTQGKQFGGRSLTWGGITLRLSSEDFHPAKKDGFGPNWPISYEEISPHYDFIENFCGIYGR
KDDIKEVPNGKYIGEIPLTENENVFGSKVKSKLNYPFIQSRGFDRNSSVKEKNWPKSSSLGSSFKKALDTGNVQIISNYL
VESFEINKITELASKLTIVNLENGYKEVLDCDLILLCASTISTLRILLNSEYKSNSSGFKDNSGKLGKYLMDHISICRFF
SVPKAKNSDKSLDNPPDLSGAGSFFIPFGSNLPEIDDINFHRGYGIWGAIDRLGIPKFLQKDVNKSIGFLIAHGEVLPRE
KNSVSLSRKTDEWGIPIPYIEFEWSENELNMAKHMEKTIQRSVKAANGKIKNIDELMNIPLGSLFTKNLIALSDSPPPPG
YYIHEVGGAPMGLNEENSVVDKFNRLWRCKNVLVLDGACWPTSSWQSPTLTMMALSRRACLNIKKT

Specific function: Unknown

COG id: COG2303

COG function: function code E; Choline dehydrogenase and related flavoproteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60957; Mature: 60957

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDISPYDAIVVGSGATGGIAALTLAEQGIKVLVIEAGPQVKRDEASNHEPKSTLKRLSGL
CCCCCCCEEEECCCCCCCCEEEEEHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHH
ITKKNANQCQHPGYWKNNPDLYSNELKHPYDFPKKKPFLWTQGKQFGGRSLTWGGITLRL
HCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCEEEECCCCCCCCEEEECCEEEEE
SSEDFHPAKKDGFGPNWPISYEEISPHYDFIENFCGIYGRKDDIKEVPNGKYIGEIPLTE
CCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHCCCCHHHHHCCCCCEEEECCCCC
NENVFGSKVKSKLNYPFIQSRGFDRNSSVKEKNWPKSSSLGSSFKKALDTGNVQIISNYL
CCCHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEHHH
VESFEINKITELASKLTIVNLENGYKEVLDCDLILLCASTISTLRILLNSEYKSNSSGFK
HHHHCHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
DNSGKLGKYLMDHISICRFFSVPKAKNSDKSLDNPPDLSGAGSFFIPFGSNLPEIDDINF
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCC
HRGYGIWGAIDRLGIPKFLQKDVNKSIGFLIAHGEVLPREKNSVSLSRKTDEWGIPIPYI
CCCCCHHHHHHHCCCHHHHHHHHCCCCCEEEECCCCCCCCCCCEEEECCCCCCCCCCCEE
EFEWSENELNMAKHMEKTIQRSVKAANGKIKNIDELMNIPLGSLFTKNLIALSDSPPPPG
EEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHCCEEEECCCCCCCC
YYIHEVGGAPMGLNEENSVVDKFNRLWRCKNVLVLDGACWPTSSWQSPTLTMMALSRRAC
EEEEECCCCCCCCCCCHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCHHHHHHHHHHH
LNIKKT
CCCCCC
>Mature Secondary Structure
MDISPYDAIVVGSGATGGIAALTLAEQGIKVLVIEAGPQVKRDEASNHEPKSTLKRLSGL
CCCCCCCEEEECCCCCCCCEEEEEHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHH
ITKKNANQCQHPGYWKNNPDLYSNELKHPYDFPKKKPFLWTQGKQFGGRSLTWGGITLRL
HCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCEEEECCCCCCCCEEEECCEEEEE
SSEDFHPAKKDGFGPNWPISYEEISPHYDFIENFCGIYGRKDDIKEVPNGKYIGEIPLTE
CCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHCCCCHHHHHCCCCCEEEECCCCC
NENVFGSKVKSKLNYPFIQSRGFDRNSSVKEKNWPKSSSLGSSFKKALDTGNVQIISNYL
CCCHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEHHH
VESFEINKITELASKLTIVNLENGYKEVLDCDLILLCASTISTLRILLNSEYKSNSSGFK
HHHHCHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
DNSGKLGKYLMDHISICRFFSVPKAKNSDKSLDNPPDLSGAGSFFIPFGSNLPEIDDINF
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCC
HRGYGIWGAIDRLGIPKFLQKDVNKSIGFLIAHGEVLPREKNSVSLSRKTDEWGIPIPYI
CCCCCHHHHHHHCCCHHHHHHHHCCCCCEEEECCCCCCCCCCCEEEECCCCCCCCCCCEE
EFEWSENELNMAKHMEKTIQRSVKAANGKIKNIDELMNIPLGSLFTKNLIALSDSPPPPG
EEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHCCEEEECCCCCCCC
YYIHEVGGAPMGLNEENSVVDKFNRLWRCKNVLVLDGACWPTSSWQSPTLTMMALSRRAC
EEEEECCCCCCCCCCCHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCHHHHHHHHHHH
LNIKKT
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA