Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
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Accession | NC_009091 |
Length | 1,641,879 |
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The map label for this gene is 126696010
Identifier: 126696010
GI number: 126696010
Start: 599066
End: 600346
Strand: Reverse
Name: 126696010
Synonym: P9301_06721
Alternate gene names: NA
Gene position: 600346-599066 (Counterclockwise)
Preceding gene: 126696013
Following gene: 126696009
Centisome position: 36.56
GC content: 30.13
Gene sequence:
>1281_bases GTGAAAAATAATAATAACTTGCTTGAAGTTCCAAATATCAACTCAAAGGATGCAAAATTAAAGAAATTAATTTATGACGT GGATGAATCCTTATTTAATGAGGATAACTATTCTTACGAAAAATTCGAGCACCTTTGCGTGTGTAGTGGAGGTACAACTT CTAGCTGTGCAAAAAATGGTTTTACAACTCTTGATCTAAGAAAAAATCACAGCAAAATTCATCTAGATAGAAAAACCAAT TTAGTAACAATTGGAGGTGGTGTAATAATGGGGGATCTATTAAATTATTTACAAAAACATAATCGAAGTTTTCCAATCGG ACTTTCTAAACTACCTGGAGCAGGCTATATACTTACTGGTGGAGTAAGCCCGCTCAGTAGAACCTACGGATTAGCCATTG ATAATATTGAATCAATAAAAGGTTTCTTGGGTAATGGCACATTTATTTCTTTAAAAAAAAATCAAATAAATAATGAAGAA CAATTGATTTGGGAAGGAATTAAAGGCGCAGCACCCTTCTTTTCAATTATTACCGAAATAGAACTTAAGACTATCCAATC TAATTCAATTAAGGTTATTGAAGGATTTGTAAATCTAAATGAACTTACAGAAATAATAAAACTATCAGAGGAATTCCCAG AAAATATTAGTCTTCAATGGATTTATGCCCAAAAAATTTATATATATATTTTTGCTGAACTCAAAAATAATTTAGAGGAT AAAAAAACAGAAAAATACCTAATGCTTCTTGACAAATTTCCTTCTCTAGAAAAACAAATTTATGAGAACTTTAACAAAAT AAATTTCTACCCAAAGGAATTGAATTTGTATGAGCTGAATGCAAATAACCATTCTGAGGTAATTAGTCTTCTTGGAGAAG ATTTAAAAAATGATATCCCAATTTTCATAAGATGTATGGACGAAATAATGGAAAATAAACCTAATAATTCCTGTTATGTT GCTTCTCAACAATTAGGTTGCAAAACTAAAAAGTTAAATCATGGCTCAAGCTTTTTTGTTCATAGAAAAAGCACTTGGAA ACCATGGATATATGCATCATGGAAAAAAAATGATCTTCAAGAAAAAGAAGTCGCTCTGGAATGGATTTATAAATCGTGGA GCAAGCTAAAAAGGTTTTATCCAAATATTCACTTAGCCCAATTGCATAATCATTTGGATTCTCATGAGGAAGAAATTAGA TTAGCTTTTGGAAACAGAATGAATGAATTAAAAACTTTAAAGAATATTTTTGACCCACAAGGTATTTTGCCTCCTTTATG A
Upstream 100 bases:
>100_bases CCACAGATAAGTATCGCGACTTGATTATTTAACTTCAAATCTAAATTATCCAAATTCAAATTATTACTTATACCATAATA GTAAAGAACAATATCTTGTA
Downstream 100 bases:
>100_bases GGTAACTTCTTAATTATAAATAAACTTAAAATGTCAAATTTCTCAAGATATTTATCTAAAAATTGGTTAGATGATCCAAA GTCAAATATTCTTTCTGGCT
Product: FAD linked oxidase, N-terminal
Products: NA
Alternate protein names: 6-HDNO [H]
Number of amino acids: Translated: 426; Mature: 426
Protein sequence:
>426_residues MKNNNNLLEVPNINSKDAKLKKLIYDVDESLFNEDNYSYEKFEHLCVCSGGTTSSCAKNGFTTLDLRKNHSKIHLDRKTN LVTIGGGVIMGDLLNYLQKHNRSFPIGLSKLPGAGYILTGGVSPLSRTYGLAIDNIESIKGFLGNGTFISLKKNQINNEE QLIWEGIKGAAPFFSIITEIELKTIQSNSIKVIEGFVNLNELTEIIKLSEEFPENISLQWIYAQKIYIYIFAELKNNLED KKTEKYLMLLDKFPSLEKQIYENFNKINFYPKELNLYELNANNHSEVISLLGEDLKNDIPIFIRCMDEIMENKPNNSCYV ASQQLGCKTKKLNHGSSFFVHRKSTWKPWIYASWKKNDLQEKEVALEWIYKSWSKLKRFYPNIHLAQLHNHLDSHEEEIR LAFGNRMNELKTLKNIFDPQGILPPL
Sequences:
>Translated_426_residues MKNNNNLLEVPNINSKDAKLKKLIYDVDESLFNEDNYSYEKFEHLCVCSGGTTSSCAKNGFTTLDLRKNHSKIHLDRKTN LVTIGGGVIMGDLLNYLQKHNRSFPIGLSKLPGAGYILTGGVSPLSRTYGLAIDNIESIKGFLGNGTFISLKKNQINNEE QLIWEGIKGAAPFFSIITEIELKTIQSNSIKVIEGFVNLNELTEIIKLSEEFPENISLQWIYAQKIYIYIFAELKNNLED KKTEKYLMLLDKFPSLEKQIYENFNKINFYPKELNLYELNANNHSEVISLLGEDLKNDIPIFIRCMDEIMENKPNNSCYV ASQQLGCKTKKLNHGSSFFVHRKSTWKPWIYASWKKNDLQEKEVALEWIYKSWSKLKRFYPNIHLAQLHNHLDSHEEEIR LAFGNRMNELKTLKNIFDPQGILPPL >Mature_426_residues MKNNNNLLEVPNINSKDAKLKKLIYDVDESLFNEDNYSYEKFEHLCVCSGGTTSSCAKNGFTTLDLRKNHSKIHLDRKTN LVTIGGGVIMGDLLNYLQKHNRSFPIGLSKLPGAGYILTGGVSPLSRTYGLAIDNIESIKGFLGNGTFISLKKNQINNEE QLIWEGIKGAAPFFSIITEIELKTIQSNSIKVIEGFVNLNELTEIIKLSEEFPENISLQWIYAQKIYIYIFAELKNNLED KKTEKYLMLLDKFPSLEKQIYENFNKINFYPKELNLYELNANNHSEVISLLGEDLKNDIPIFIRCMDEIMENKPNNSCYV ASQQLGCKTKKLNHGSSFFVHRKSTWKPWIYASWKKNDLQEKEVALEWIYKSWSKLKRFYPNIHLAQLHNHLDSHEEEIR LAFGNRMNELKTLKNIFDPQGILPPL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding PCMH-type domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012951 - InterPro: IPR016166 - InterPro: IPR016167 - InterPro: IPR016168 - InterPro: IPR006094 - InterPro: IPR006093 [H]
Pfam domain/function: PF08031 BBE; PF01565 FAD_binding_4 [H]
EC number: =1.5.3.6 [H]
Molecular weight: Translated: 49100; Mature: 49100
Theoretical pI: Translated: 7.87; Mature: 7.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNNNNLLEVPNINSKDAKLKKLIYDVDESLFNEDNYSYEKFEHLCVCSGGTTSSCAKNG CCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHCEEEEECCCCCCHHHHCC FTTLDLRKNHSKIHLDRKTNLVTIGGGVIMGDLLNYLQKHNRSFPIGLSKLPGAGYILTG CEEEEEECCCCEEEEECCCCEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEC GVSPLSRTYGLAIDNIESIKGFLGNGTFISLKKNQINNEEQLIWEGIKGAAPFFSIITEI CCCHHHHHHCCCCCCHHHHHHHCCCCEEEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHH ELKTIQSNSIKVIEGFVNLNELTEIIKLSEEFPENISLQWIYAQKIYIYIFAELKNNLED HHEEECCCCEEEEEHHHCHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEEEEEHHHCCCHH KKTEKYLMLLDKFPSLEKQIYENFNKINFYPKELNLYELNANNHSEVISLLGEDLKNDIP HHHHHHHHHHHHCCCHHHHHHHCHHHCEEEECCCEEEEECCCCHHHHHHHHHHHHHCCCC IFIRCMDEIMENKPNNSCYVASQQLGCKTKKLNHGSSFFVHRKSTWKPWIYASWKKNDLQ HHHHHHHHHHHCCCCCCEEEECHHCCCCHHCCCCCCEEEEEECCCCCCEEEEECCCCCCH EKEVALEWIYKSWSKLKRFYPNIHLAQLHNHLDSHEEEIRLAFGNRMNELKTLKNIFDPQ HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHCCCC GILPPL CCCCCC >Mature Secondary Structure MKNNNNLLEVPNINSKDAKLKKLIYDVDESLFNEDNYSYEKFEHLCVCSGGTTSSCAKNG CCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHCEEEEECCCCCCHHHHCC FTTLDLRKNHSKIHLDRKTNLVTIGGGVIMGDLLNYLQKHNRSFPIGLSKLPGAGYILTG CEEEEEECCCCEEEEECCCCEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEC GVSPLSRTYGLAIDNIESIKGFLGNGTFISLKKNQINNEEQLIWEGIKGAAPFFSIITEI CCCHHHHHHCCCCCCHHHHHHHCCCCEEEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHH ELKTIQSNSIKVIEGFVNLNELTEIIKLSEEFPENISLQWIYAQKIYIYIFAELKNNLED HHEEECCCCEEEEEHHHCHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEEEEEHHHCCCHH KKTEKYLMLLDKFPSLEKQIYENFNKINFYPKELNLYELNANNHSEVISLLGEDLKNDIP HHHHHHHHHHHHCCCHHHHHHHCHHHCEEEECCCEEEEECCCCHHHHHHHHHHHHHCCCC IFIRCMDEIMENKPNNSCYVASQQLGCKTKKLNHGSSFFVHRKSTWKPWIYASWKKNDLQ HHHHHHHHHHHCCCCCCEEEECHHCCCCHHCCCCCCEEEEEECCCCCCEEEEECCCCCCH EKEVALEWIYKSWSKLKRFYPNIHLAQLHNHLDSHEEEIRLAFGNRMNELKTLKNIFDPQ HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHCCCC GILPPL CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3622516; 2680607; 2115879 [H]