Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
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Accession | NC_009091 |
Length | 1,641,879 |
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The map label for this gene is 126696003
Identifier: 126696003
GI number: 126696003
Start: 590550
End: 591482
Strand: Reverse
Name: 126696003
Synonym: P9301_06651
Alternate gene names: NA
Gene position: 591482-590550 (Counterclockwise)
Preceding gene: 126696004
Following gene: 126696001
Centisome position: 36.02
GC content: 29.9
Gene sequence:
>933_bases ATGAAAGAAAAATTCCCTTCAATATATAAAGAACCTATAGAAACATTGCAAATTAACATAGGTTATAAATGCAATCAGGC TTGTAAGCATTGTCATGTCAATTCGAGTCCCCTAAGGACTGAAAAAATGTCCAATGAAATGATATCTCTTATTCCAAAGA TAATTGAAAAATATAAAATCAAGACTTTAGATATTACAGGTGGTGCGCCAGAACTTCACCCAGAATTTAAAAACCTAATA ACCAGCTTAAGCACAAAAAAAGTTGATATTATTGATAGGTGCAATTTGACAATTTTTTTTGAAGAGGGTTATGAAGATCT TCCTCAATTTCTTGCAAAAAATAAAGTGATAGTTACTGCTTCGCTACCATGTTATGAAAAAAATAATGTTGATTTTCAAA GAGGTTTTGGCGTTTTTGAAAAAAGTATTAATGCCATTAAAATTCTTAATGATCTAGGATATGGAAAGAAAGAAAATGGA TTACAATTAAATCTTGTTTACAATCCTGTAAGCCCAATTCTTCCTCCTTCTCAGGAAATATTGGAGAAGGATTATAAAGA AATTCTATTCGAAAAATTCAACATCGTTTTTAATAATTTATACACAATAACTAATATGCCAATAAATAGATATGAAGAAT TTCTTAGAAGAGAAGGGAAACTAAATACTTATTACAAATTACTAAAAGAAAATTTTAATGAAAAAAATTTAGAAAATCTT ATGTGTAAAAAGACAATTAGCGTAAATTGGCTAGGAGAAATTTATGACTGTGACTTTAACCAACAGATAAATTTCCGAGA GAATAAAGGACCAAAGACACTTTTTGATCTATTGGATGAATCATTTACTTTTGACTACGGGGTAGCTGTAAAAGAACATT GTTTTGCTTGCACTGCAGGTGCAGGGTCAAGTTGTGGAGGGACTTTAAGTTGA
Upstream 100 bases:
>100_bases TACATAAGTTGGTTTATTGAACTTGCTAATGAGAGGTCAAACTTTAAAAAAAATAGTTGACTTTTTTATTTTCTAATGAC AATTTATAAATAATAGATTC
Downstream 100 bases:
>100_bases AACTTGCTAAATGCAATTAGGACAAATAGCTCTTACATTCAAAGAGGATTCAATTAGTTTAAAACCATTAACTTTTGCTG CAATTTTGCCTGCCTCTAAA
Product: Fe-S oxidoreductase
Products: NA
Alternate protein names: Radical SAM Domain-Containing Protein; Fe-S Oxidoreductase; L-Asparaginase II; Radical SAM Superfamily Protein; Radical SAM Family Protein; Fe-S Oxidoreductases; NifB/MoaA Family Fe-S Oxidoreductase; Fe-S Oxidoreductase Of MoaA/NifB/PqqE Family
Number of amino acids: Translated: 310; Mature: 310
Protein sequence:
>310_residues MKEKFPSIYKEPIETLQINIGYKCNQACKHCHVNSSPLRTEKMSNEMISLIPKIIEKYKIKTLDITGGAPELHPEFKNLI TSLSTKKVDIIDRCNLTIFFEEGYEDLPQFLAKNKVIVTASLPCYEKNNVDFQRGFGVFEKSINAIKILNDLGYGKKENG LQLNLVYNPVSPILPPSQEILEKDYKEILFEKFNIVFNNLYTITNMPINRYEEFLRREGKLNTYYKLLKENFNEKNLENL MCKKTISVNWLGEIYDCDFNQQINFRENKGPKTLFDLLDESFTFDYGVAVKEHCFACTAGAGSSCGGTLS
Sequences:
>Translated_310_residues MKEKFPSIYKEPIETLQINIGYKCNQACKHCHVNSSPLRTEKMSNEMISLIPKIIEKYKIKTLDITGGAPELHPEFKNLI TSLSTKKVDIIDRCNLTIFFEEGYEDLPQFLAKNKVIVTASLPCYEKNNVDFQRGFGVFEKSINAIKILNDLGYGKKENG LQLNLVYNPVSPILPPSQEILEKDYKEILFEKFNIVFNNLYTITNMPINRYEEFLRREGKLNTYYKLLKENFNEKNLENL MCKKTISVNWLGEIYDCDFNQQINFRENKGPKTLFDLLDESFTFDYGVAVKEHCFACTAGAGSSCGGTLS >Mature_310_residues MKEKFPSIYKEPIETLQINIGYKCNQACKHCHVNSSPLRTEKMSNEMISLIPKIIEKYKIKTLDITGGAPELHPEFKNLI TSLSTKKVDIIDRCNLTIFFEEGYEDLPQFLAKNKVIVTASLPCYEKNNVDFQRGFGVFEKSINAIKILNDLGYGKKENG LQLNLVYNPVSPILPPSQEILEKDYKEILFEKFNIVFNNLYTITNMPINRYEEFLRREGKLNTYYKLLKENFNEKNLENL MCKKTISVNWLGEIYDCDFNQQINFRENKGPKTLFDLLDESFTFDYGVAVKEHCFACTAGAGSSCGGTLS
Specific function: Unknown
COG id: COG0535
COG function: function code R; Predicted Fe-S oxidoreductases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35665; Mature: 35665
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEKFPSIYKEPIETLQINIGYKCNQACKHCHVNSSPLRTEKMSNEMISLIPKIIEKYKI CCCCCHHHHHCHHHEEEEECCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCE KTLDITGGAPELHPEFKNLITSLSTKKVDIIDRCNLTIFFEEGYEDLPQFLAKNKVIVTA EEEEECCCCCCCCHHHHHHHHHHCCCCEEEEECCCEEEEECCCHHHHHHHHHCCCEEEEE SLPCYEKNNVDFQRGFGVFEKSINAIKILNDLGYGKKENGLQLNLVYNPVSPILPPSQEI ECCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCHHHH LEKDYKEILFEKFNIVFNNLYTITNMPINRYEEFLRREGKLNTYYKLLKENFNEKNLENL HHHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHH MCKKTISVNWLGEIYDCDFNQQINFRENKGPKTLFDLLDESFTFDYGVAVKEHCFACTAG HHHHHCCEEECCCEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHEEEECC AGSSCGGTLS CCCCCCCCCC >Mature Secondary Structure MKEKFPSIYKEPIETLQINIGYKCNQACKHCHVNSSPLRTEKMSNEMISLIPKIIEKYKI CCCCCHHHHHCHHHEEEEECCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCE KTLDITGGAPELHPEFKNLITSLSTKKVDIIDRCNLTIFFEEGYEDLPQFLAKNKVIVTA EEEEECCCCCCCCHHHHHHHHHHCCCCEEEEECCCEEEEECCCHHHHHHHHHCCCEEEEE SLPCYEKNNVDFQRGFGVFEKSINAIKILNDLGYGKKENGLQLNLVYNPVSPILPPSQEI ECCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCHHHH LEKDYKEILFEKFNIVFNNLYTITNMPINRYEEFLRREGKLNTYYKLLKENFNEKNLENL HHHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHH MCKKTISVNWLGEIYDCDFNQQINFRENKGPKTLFDLLDESFTFDYGVAVKEHCFACTAG HHHHHCCEEECCCEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHEEEECC AGSSCGGTLS CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA