Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
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Accession | NC_009091 |
Length | 1,641,879 |
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The map label for this gene is 126695963
Identifier: 126695963
GI number: 126695963
Start: 553550
End: 553972
Strand: Reverse
Name: 126695963
Synonym: P9301_06251
Alternate gene names: NA
Gene position: 553972-553550 (Counterclockwise)
Preceding gene: 126695969
Following gene: 126695962
Centisome position: 33.74
GC content: 35.93
Gene sequence:
>423_bases ATGTCTAATTCAAATTTCAGCAATAATCCTGGACAAGAAAATTACAGAGGGCGTTCTAACAATGAAAGATCTAATTTCAG AGATAGATCGGGCGGCAGAAGAGATGGAGGAGGATTCCGCATAAGATTGAGTGATAACGAAATGAAAGCTGTTAAATCAA TACAAGAGACCTTTCAATTAAGATCTACCGTTGCGGTTCTGGGTTTCTCTGTTAGAACACTTAGCGAAATGATCAAAGAC GAAAAATTGATTGAATCAATCAAAGAATATGCAAAAAATAATAAAAACTCTTCTCCTAGTAGACAATCACAAAATTCTTA TGAAGAAAAGACAAAAACAGCACCTGATCCTTTTGCGAGACCTGTAAAAAGTGCATCAACTGAAGAGATCCAATCTAGCG AAGTAGAAGAGGATGGCAAATAA
Upstream 100 bases:
>100_bases CGTTAATCAAAAGATAAAAATTTAAGCCTTTTAAAAAAGACTTATTGCATAACAAGATGCTAAGTTAATAGACTATTTAA ATAACTTAAGAAACATTAAG
Downstream 100 bases:
>100_bases AAAAAGAATTCTTTCGGGAGTTCAACCAACTGGTGATTTACATATTGGGAATTGGCTTGGGGCCATAAATAATTGGGTTA CGCTTCAAGAGCAATATGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MSNSNFSNNPGQENYRGRSNNERSNFRDRSGGRRDGGGFRIRLSDNEMKAVKSIQETFQLRSTVAVLGFSVRTLSEMIKD EKLIESIKEYAKNNKNSSPSRQSQNSYEEKTKTAPDPFARPVKSASTEEIQSSEVEEDGK
Sequences:
>Translated_140_residues MSNSNFSNNPGQENYRGRSNNERSNFRDRSGGRRDGGGFRIRLSDNEMKAVKSIQETFQLRSTVAVLGFSVRTLSEMIKD EKLIESIKEYAKNNKNSSPSRQSQNSYEEKTKTAPDPFARPVKSASTEEIQSSEVEEDGK >Mature_139_residues SNSNFSNNPGQENYRGRSNNERSNFRDRSGGRRDGGGFRIRLSDNEMKAVKSIQETFQLRSTVAVLGFSVRTLSEMIKDE KLIESIKEYAKNNKNSSPSRQSQNSYEEKTKTAPDPFARPVKSASTEEIQSSEVEEDGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15804; Mature: 15673
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNSNFSNNPGQENYRGRSNNERSNFRDRSGGRRDGGGFRIRLSDNEMKAVKSIQETFQL CCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHH RSTVAVLGFSVRTLSEMIKDEKLIESIKEYAKNNKNSSPSRQSQNSYEEKTKTAPDPFAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHH PVKSASTEEIQSSEVEEDGK HHHCCCHHHHHHHHHCCCCC >Mature Secondary Structure SNSNFSNNPGQENYRGRSNNERSNFRDRSGGRRDGGGFRIRLSDNEMKAVKSIQETFQL CCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHH RSTVAVLGFSVRTLSEMIKDEKLIESIKEYAKNNKNSSPSRQSQNSYEEKTKTAPDPFAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHH PVKSASTEEIQSSEVEEDGK HHHCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA