Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
---|---|
Accession | NC_009091 |
Length | 1,641,879 |
Click here to switch to the map view.
The map label for this gene is 126695803
Identifier: 126695803
GI number: 126695803
Start: 406098
End: 407240
Strand: Reverse
Name: 126695803
Synonym: P9301_04651
Alternate gene names: NA
Gene position: 407240-406098 (Counterclockwise)
Preceding gene: 126695805
Following gene: 126695797
Centisome position: 24.8
GC content: 31.41
Gene sequence:
>1143_bases ATGATTATTAATTCACAAAAAAGATCATTTGGTAGAGGGGCGAAAGTGAGCTTATTCACTTTGGGGACAATGCGATCAAC TGAAAGTCTCGAAAAAATGTATAGCATAATAAAAAATGCATATTATGTAGGAATTAACCACATAGAAACAGCACCCTCTT ATGGTGATGCTGAATCACTTATTGGAAATTCAATAAAAAAATTAGCAATAGAAGAGAATATAAAAGAAAAAAATTGGGTG ATTACTTCCAAAGTTTTACCAAAGGGTGATTTTGACTTTTTAAAAAATAATTTTAAAAAGTCTCTTAAAAATTTAAATCG CGAGAAAATTAATAATCTTGCAATTCACGGACTCAACTTAAAACAACATCTAGATTGGGTTCTTTCTGGAGAGGGTAAGA AATTCATTTCTTGGATACTTGAAAAGGAACTAGTTGATCAAGTCGGTTTTAGTTCTCACGGAAGTTATTCACTAATTAAA GATGCAATTAACTGTGAAGTTTTTACTTTTTGTAGTCTTCATTTACATTATTTAGATCAATCTAAGATTGCTTTAGCAGA GGAAGCTATAAAAAAAGGTATGGGAGTTTTAGCAATATCACCTGCAGATAAAGGCGGTAGATTGTATTCTCCAAGTGATA TTTTGATAGAGGCCTCTAAGCCTTTTCATCCATTAGAATTAGCGTATCGATTTCTTCTCGCAAAAGGCATTACTACTTTA TCCTTGGGGGCGACAAACAAAAAAGATTTTGAATTTGCGCATAAACTTAGAAACTCATTCGAGAAGCTTACAAAACTTGA AAAAAGCGCCCTTAATAAAATTGAGGAAGTTTCTAATGAAAGATTAAACTCAACCAAATGTGAACAATGTAGATCTTGTC TTCCATGTCCAAATGAAGTGCCTATTCCTGAAATACTTCGTTTAAGAAATATATCTGTTGGTTATGGCCAATTAGAATTT GCAAAAGAAAGATACAATTTAATAGGAAAAGCTGGCCACTGGTGGGAAGAAAAAAATTCCTCATTTTGTCAAGAATGTAA TAAATGTGTTCCTAAATGTCCTAGTAAATTAGATATACCAAATTTATTAAAGGAAACTCATAACTTATTAATTGAAAATC CTTCAAAAAGATTATGGGGATAA
Upstream 100 bases:
>100_bases AAATATTTATGCAAAATTTTGTATTTACTTTAATTTACTTTAAATCATTTTCAACTATAAATAAATTAAAGAGTAAAAAA AAGAAATTGATCATATTTAG
Downstream 100 bases:
>100_bases GGACTCATTCCAGATATTTTTAAGATTAATTTTTTGTTCATTTGTTAAAACAGGGAAAGACCAACTATTTTCCCAACATT TCTCAGAAGGTCCTGAGATG
Product: aldo/keto reductase
Products: NA
Alternate protein names: Aldo/Keto Reductase Family Oxidoreductase; Oxidoreductase; Oxidoreductase Aldo/Keto Reductase Family; Aldo/Keto Reductase Family Protein; Oxidoreductase Aldo/Keto Reductase Family Protein; Aldo/Keto Reductase Ferredoxin Subunit; Oxidoreductase Of Aldo/Keto Reductase Family; Oxidoreductase Aldo/Keto Reductase; Aldo/Keto Reductase Family
Number of amino acids: Translated: 380; Mature: 380
Protein sequence:
>380_residues MIINSQKRSFGRGAKVSLFTLGTMRSTESLEKMYSIIKNAYYVGINHIETAPSYGDAESLIGNSIKKLAIEENIKEKNWV ITSKVLPKGDFDFLKNNFKKSLKNLNREKINNLAIHGLNLKQHLDWVLSGEGKKFISWILEKELVDQVGFSSHGSYSLIK DAINCEVFTFCSLHLHYLDQSKIALAEEAIKKGMGVLAISPADKGGRLYSPSDILIEASKPFHPLELAYRFLLAKGITTL SLGATNKKDFEFAHKLRNSFEKLTKLEKSALNKIEEVSNERLNSTKCEQCRSCLPCPNEVPIPEILRLRNISVGYGQLEF AKERYNLIGKAGHWWEEKNSSFCQECNKCVPKCPSKLDIPNLLKETHNLLIENPSKRLWG
Sequences:
>Translated_380_residues MIINSQKRSFGRGAKVSLFTLGTMRSTESLEKMYSIIKNAYYVGINHIETAPSYGDAESLIGNSIKKLAIEENIKEKNWV ITSKVLPKGDFDFLKNNFKKSLKNLNREKINNLAIHGLNLKQHLDWVLSGEGKKFISWILEKELVDQVGFSSHGSYSLIK DAINCEVFTFCSLHLHYLDQSKIALAEEAIKKGMGVLAISPADKGGRLYSPSDILIEASKPFHPLELAYRFLLAKGITTL SLGATNKKDFEFAHKLRNSFEKLTKLEKSALNKIEEVSNERLNSTKCEQCRSCLPCPNEVPIPEILRLRNISVGYGQLEF AKERYNLIGKAGHWWEEKNSSFCQECNKCVPKCPSKLDIPNLLKETHNLLIENPSKRLWG >Mature_380_residues MIINSQKRSFGRGAKVSLFTLGTMRSTESLEKMYSIIKNAYYVGINHIETAPSYGDAESLIGNSIKKLAIEENIKEKNWV ITSKVLPKGDFDFLKNNFKKSLKNLNREKINNLAIHGLNLKQHLDWVLSGEGKKFISWILEKELVDQVGFSSHGSYSLIK DAINCEVFTFCSLHLHYLDQSKIALAEEAIKKGMGVLAISPADKGGRLYSPSDILIEASKPFHPLELAYRFLLAKGITTL SLGATNKKDFEFAHKLRNSFEKLTKLEKSALNKIEEVSNERLNSTKCEQCRSCLPCPNEVPIPEILRLRNISVGYGQLEF AKERYNLIGKAGHWWEEKNSSFCQECNKCVPKCPSKLDIPNLLKETHNLLIENPSKRLWG
Specific function: Unknown
COG id: COG1453
COG function: function code R; Predicted oxidoreductases of the aldo/keto reductase family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42995; Mature: 42995
Theoretical pI: Translated: 9.29; Mature: 9.29
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIINSQKRSFGRGAKVSLFTLGTMRSTESLEKMYSIIKNAYYVGINHIETAPSYGDAESL CCCCCCCHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHEEEECCHHCCCCCCCCHHHH IGNSIKKLAIEENIKEKNWVITSKVLPKGDFDFLKNNFKKSLKNLNREKINNLAIHGLNL HHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCHHHHHHHEEECCCH KQHLDWVLSGEGKKFISWILEKELVDQVGFSSHGSYSLIKDAINCEVFTFCSLHLHYLDQ HHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCC SKIALAEEAIKKGMGVLAISPADKGGRLYSPSDILIEASKPFHPLELAYRFLLAKGITTL HHHHHHHHHHHCCCCEEEECCCCCCCEEECCCCEEEECCCCCCHHHHHHHHHHHHCCCEE SLGATNKKDFEFAHKLRNSFEKLTKLEKSALNKIEEVSNERLNSTKCEQCRSCLPCPNEV EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCC PIPEILRLRNISVGYGQLEFAKERYNLIGKAGHWWEEKNSSFCQECNKCVPKCPSKLDIP CHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHCCCCCCCHH NLLKETHNLLIENPSKRLWG HHHHHHHHHEEECCHHHCCC >Mature Secondary Structure MIINSQKRSFGRGAKVSLFTLGTMRSTESLEKMYSIIKNAYYVGINHIETAPSYGDAESL CCCCCCCHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHEEEECCHHCCCCCCCCHHHH IGNSIKKLAIEENIKEKNWVITSKVLPKGDFDFLKNNFKKSLKNLNREKINNLAIHGLNL HHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCHHHHHHHEEECCCH KQHLDWVLSGEGKKFISWILEKELVDQVGFSSHGSYSLIKDAINCEVFTFCSLHLHYLDQ HHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCC SKIALAEEAIKKGMGVLAISPADKGGRLYSPSDILIEASKPFHPLELAYRFLLAKGITTL HHHHHHHHHHHCCCCEEEECCCCCCCEEECCCCEEEECCCCCCHHHHHHHHHHHHCCCEE SLGATNKKDFEFAHKLRNSFEKLTKLEKSALNKIEEVSNERLNSTKCEQCRSCLPCPNEV EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCC PIPEILRLRNISVGYGQLEFAKERYNLIGKAGHWWEEKNSSFCQECNKCVPKCPSKLDIP CHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHCCCCCCCHH NLLKETHNLLIENPSKRLWG HHHHHHHHHEEECCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA