Click here to switch to the map view.

The map label for this gene is 126695459

Identifier: 126695459

GI number: 126695459

Start: 119066

End: 119716

Strand: Reverse

Name: 126695459

Synonym: P9301_01211

Alternate gene names: NA

Gene position: 119716-119066 (Counterclockwise)

Preceding gene: 126695460

Following gene: 126695458

Centisome position: 7.29

GC content: 29.19

Gene sequence:

>651_bases
TTGAGTATCCCAAGAGTAATAATTGTTATAGCATCAAGTCTTGATGGGAGAATTGCATTTCCTGGAGGTGGAGAATCACA
TCTTGGAAGCGATGAAGATAAAAAAATATTAAATCAAAACTTATCAATGGTTGACGCCACCATTTTTGGTTTAGGTACTT
TAGTAGCTCATCAATCAACGTATCTGGTTAAAAATCTCAATGATAATGACGAAGTAAATATATCAAAAAGCCAACCAATT
TCTATAGTTGCTTCAAATAGCAAAAAATTTAACAATAATTGGAAATACTTTCGTCAACCAATTAGAAGATGGCTAATAAG
CTCAAGTAAAGTTGATAATTCGTCGAATAATGAATTCGAGAAAGAACTCTTTTTCGAAGATTCATGGGAAAAAACTTTAA
TTTCACTCAAAAAACAAGGGATAAATGATTTAGCTCTATTAGGAGGTGCAAAACTTATAAATTCATTTATAAAAGAGGAT
CTAATAACAGATATAAAAATTACAATAATTCCACGAATTATTGGAGGTAGATATACATGGATCCCTCCAGAACAAACAAA
TGCGATTTTTAATCTCGAAAGACTATGGGAAATAAAATCAATTAAAAATTTAATGAATAATGAAATCCATATTCATTACA
AAAAAATTTAA

Upstream 100 bases:

>100_bases
GACTCCAAGAGAGTCCAAATAATGCTGCAGAAATTTATGTTGATCAAAAGTTAACCAACTCATTGAAGTTGAAATTTGAA
AATAGTTTAGTAACGCAAAC

Downstream 100 bases:

>100_bases
GATAGATTTAATAATAGATGAACCAACCAATACATAAAGTTGAAGTCAAATTATCAATTAAAGAAATTTCCAAGGAGATA
TGGAATGAATTAGCCAATGG

Product: RibD/RibG domain-containing protein

Products: 5-amino-6-(5-phosphoribosylamino)uracil; NADPH; H+

Alternate protein names: Riboflavin-Specific Deaminase; Bifunctional Deaminase-Reductase Domain Protein; Pyrimidine Reductase Riboflavin Biosynthesis; Bifunctional Deaminase-Reductase Domain-Containing Protein; Pyrimidine Reductase; Bifunctional Deaminase-Reductase-Like

Number of amino acids: Translated: 216; Mature: 215

Protein sequence:

>216_residues
MSIPRVIIVIASSLDGRIAFPGGGESHLGSDEDKKILNQNLSMVDATIFGLGTLVAHQSTYLVKNLNDNDEVNISKSQPI
SIVASNSKKFNNNWKYFRQPIRRWLISSSKVDNSSNNEFEKELFFEDSWEKTLISLKKQGINDLALLGGAKLINSFIKED
LITDIKITIIPRIIGGRYTWIPPEQTNAIFNLERLWEIKSIKNLMNNEIHIHYKKI

Sequences:

>Translated_216_residues
MSIPRVIIVIASSLDGRIAFPGGGESHLGSDEDKKILNQNLSMVDATIFGLGTLVAHQSTYLVKNLNDNDEVNISKSQPI
SIVASNSKKFNNNWKYFRQPIRRWLISSSKVDNSSNNEFEKELFFEDSWEKTLISLKKQGINDLALLGGAKLINSFIKED
LITDIKITIIPRIIGGRYTWIPPEQTNAIFNLERLWEIKSIKNLMNNEIHIHYKKI
>Mature_215_residues
SIPRVIIVIASSLDGRIAFPGGGESHLGSDEDKKILNQNLSMVDATIFGLGTLVAHQSTYLVKNLNDNDEVNISKSQPIS
IVASNSKKFNNNWKYFRQPIRRWLISSSKVDNSSNNEFEKELFFEDSWEKTLISLKKQGINDLALLGGAKLINSFIKEDL
ITDIKITIIPRIIGGRYTWIPPEQTNAIFNLERLWEIKSIKNLMNNEIHIHYKKI

Specific function: Unknown

COG id: COG1985

COG function: function code H; Pyrimidine reductase, riboflavin biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.1.1.193

Molecular weight: Translated: 24571; Mature: 24439

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIPRVIIVIASSLDGRIAFPGGGESHLGSDEDKKILNQNLSMVDATIFGLGTLVAHQST
CCCCEEEEEEECCCCCEEECCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCE
YLVKNLNDNDEVNISKSQPISIVASNSKKFNNNWKYFRQPIRRWLISSSKVDNSSNNEFE
EEEECCCCCCCEEECCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHH
KELFFEDSWEKTLISLKKQGINDLALLGGAKLINSFIKEDLITDIKITIIPRIIGGRYTW
HHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEHHHCCEEEE
IPPEQTNAIFNLERLWEIKSIKNLMNNEIHIHYKKI
CCCCCCCCEECHHHHHHHHHHHHHHCCCEEEEEECC
>Mature Secondary Structure 
SIPRVIIVIASSLDGRIAFPGGGESHLGSDEDKKILNQNLSMVDATIFGLGTLVAHQST
CCCEEEEEEECCCCCEEECCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCE
YLVKNLNDNDEVNISKSQPISIVASNSKKFNNNWKYFRQPIRRWLISSSKVDNSSNNEFE
EEEECCCCCCCEEECCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHH
KELFFEDSWEKTLISLKKQGINDLALLGGAKLINSFIKEDLITDIKITIIPRIIGGRYTW
HHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEHHHCCEEEE
IPPEQTNAIFNLERLWEIKSIKNLMNNEIHIHYKKI
CCCCCCCCEECHHHHHHHHHHHHHHCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 5-amino-6-(5-phosphoribitylamino)uracil; NADP+

Specific reaction: 5-amino-6-(5-phosphoribitylamino)uracil + NADP+ = 5-amino-6-(5-phosphoribosylamino)uracil + NADPH + H+

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA