Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
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Accession | NC_009091 |
Length | 1,641,879 |
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The map label for this gene is 126695458
Identifier: 126695458
GI number: 126695458
Start: 117894
End: 119048
Strand: Reverse
Name: 126695458
Synonym: P9301_01201
Alternate gene names: NA
Gene position: 119048-117894 (Counterclockwise)
Preceding gene: 126695459
Following gene: 126695457
Centisome position: 7.25
GC content: 29.35
Gene sequence:
>1155_bases ATGAACCAACCAATACATAAAGTTGAAGTCAAATTATCAATTAAAGAAATTTCCAAGGAGATATGGAATGAATTAGCCAA TGGAATTAATAATCCATTTTATGAATGGACTTGGATTAAAAACCTTGAGATATCAAAAAGTGTTTCAAGAGAAACTGGTT GGCAGCCATTATATTTTGTTGCTGTTAAAAATGAAGAGATATTAGGTATTGCACCACTTTTTTTAAAAAATCATAGCTAT GGAGAATTCATTTTTGACCAATCATTTGCAAGATTGGCTCAAGAGCTGAATTTAAATTATTACCCTAAATTAATTGGAAT GAGTCCTTATAGTCCTGTAAATGGATATCAATTTCTTTATAAAAAAAATAAAGACAAGAACGAAATTACAAATTTACTTA TAAACCACATCGAAAGCTTTGCGATTAAAAACAAAGTTCTAAGTTGTAATTTTTTATATATTGATGAAAGCTGGGGCAAC CATCTTAAATCTTTGGGATACCATGAATGGATAAATTCCAGCAGTGAATGGAGGAGTAATGGAGAAAAAACATTTAATGA TTTTCTTTCTAGATTTAACTCTAATCAGAGAAAAAATATAAAAAAAGAGAGGAAATCAATTACTAAACAAGATATTAAAG TAGAAATTTTTAATGAAGATGATATCAACCAAGAAATACTCAAAAAAATGCATAATTTTTATGAACAGCATTGCTCGAGG TGGGGAGTTTGGGGAAGTAAATATCTAACATCTACATTTTTCGAAACACTGGTTGATAATAAAAAAAATCTTTTACTTTT TAGCGCATCAAAACATGATTCAGATGAAATTTTTGCTATGTCGATGTGCGTTAAAAATCAAAACAACTTATGGGGTAGAT ATTGGGGTAGTCAAAAAGAAATATCTAATTTACATTTTGAATTATGCTATTACCAGCCAATTGAATGGGCAATAAAAAAT GGTATCCATTTGTTTGATCCTGGAGCGGGTGGCAAACATAAGAGACGTAGAGGATTTTTTGCAAAAAGCACTATTAGCTT GCATAAGTGGTTTGACAAAAATATGGAAAATATAATTAGTCCTTGGCTAAATGAAGTGAATAAACAAACCGAGATGGAAA TTGATTTTGAAAATAAATCTATACCCTTTAAATAA
Upstream 100 bases:
>100_bases TTAATCTCGAAAGACTATGGGAAATAAAATCAATTAAAAATTTAATGAATAATGAAATCCATATTCATTACAAAAAAATT TAAGATAGATTTAATAATAG
Downstream 100 bases:
>100_bases AAAATTATTCGGCTTTACCAAAGATTATATTAGTAATATAGTTTGAAATTAAATTCCTAAAATGGATTCAAGTCAAAGTT TAAATAGAAAAATAAAGATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 384; Mature: 384
Protein sequence:
>384_residues MNQPIHKVEVKLSIKEISKEIWNELANGINNPFYEWTWIKNLEISKSVSRETGWQPLYFVAVKNEEILGIAPLFLKNHSY GEFIFDQSFARLAQELNLNYYPKLIGMSPYSPVNGYQFLYKKNKDKNEITNLLINHIESFAIKNKVLSCNFLYIDESWGN HLKSLGYHEWINSSSEWRSNGEKTFNDFLSRFNSNQRKNIKKERKSITKQDIKVEIFNEDDINQEILKKMHNFYEQHCSR WGVWGSKYLTSTFFETLVDNKKNLLLFSASKHDSDEIFAMSMCVKNQNNLWGRYWGSQKEISNLHFELCYYQPIEWAIKN GIHLFDPGAGGKHKRRRGFFAKSTISLHKWFDKNMENIISPWLNEVNKQTEMEIDFENKSIPFK
Sequences:
>Translated_384_residues MNQPIHKVEVKLSIKEISKEIWNELANGINNPFYEWTWIKNLEISKSVSRETGWQPLYFVAVKNEEILGIAPLFLKNHSY GEFIFDQSFARLAQELNLNYYPKLIGMSPYSPVNGYQFLYKKNKDKNEITNLLINHIESFAIKNKVLSCNFLYIDESWGN HLKSLGYHEWINSSSEWRSNGEKTFNDFLSRFNSNQRKNIKKERKSITKQDIKVEIFNEDDINQEILKKMHNFYEQHCSR WGVWGSKYLTSTFFETLVDNKKNLLLFSASKHDSDEIFAMSMCVKNQNNLWGRYWGSQKEISNLHFELCYYQPIEWAIKN GIHLFDPGAGGKHKRRRGFFAKSTISLHKWFDKNMENIISPWLNEVNKQTEMEIDFENKSIPFK >Mature_384_residues MNQPIHKVEVKLSIKEISKEIWNELANGINNPFYEWTWIKNLEISKSVSRETGWQPLYFVAVKNEEILGIAPLFLKNHSY GEFIFDQSFARLAQELNLNYYPKLIGMSPYSPVNGYQFLYKKNKDKNEITNLLINHIESFAIKNKVLSCNFLYIDESWGN HLKSLGYHEWINSSSEWRSNGEKTFNDFLSRFNSNQRKNIKKERKSITKQDIKVEIFNEDDINQEILKKMHNFYEQHCSR WGVWGSKYLTSTFFETLVDNKKNLLLFSASKHDSDEIFAMSMCVKNQNNLWGRYWGSQKEISNLHFELCYYQPIEWAIKN GIHLFDPGAGGKHKRRRGFFAKSTISLHKWFDKNMENIISPWLNEVNKQTEMEIDFENKSIPFK
Specific function: Unknown
COG id: COG3146
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45511; Mature: 45511
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQPIHKVEVKLSIKEISKEIWNELANGINNPFYEWTWIKNLEISKSVSRETGWQPLYFV CCCCCEEEEEEEEHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHCCCCCEEEE AVKNEEILGIAPLFLKNHSYGEFIFDQSFARLAQELNLNYYPKLIGMSPYSPVNGYQFLY EECCCCEEEEEHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCHHHEE KKNKDKNEITNLLINHIESFAIKNKVLSCNFLYIDESWGNHLKSLGYHEWINSSSEWRSN ECCCCHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCHHHHHHHCCHHHHHCCCHHHHCC GEKTFNDFLSRFNSNQRKNIKKERKSITKQDIKVEIFNEDDINQEILKKMHNFYEQHCSR CHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH WGVWGSKYLTSTFFETLVDNKKNLLLFSASKHDSDEIFAMSMCVKNQNNLWGRYWGSQKE CCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHEEHHHHHCCCCCCCHHHCCCHHH ISNLHFELCYYQPIEWAIKNGIHLFDPGAGGKHKRRRGFFAKSTISLHKWFDKNMENIIS HHCCEEEEEEECCHHHHHHCCCEEECCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHH PWLNEVNKQTEMEIDFENKSIPFK HHHHHHCCCCEEEEEECCCCCCCC >Mature Secondary Structure MNQPIHKVEVKLSIKEISKEIWNELANGINNPFYEWTWIKNLEISKSVSRETGWQPLYFV CCCCCEEEEEEEEHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHCCCCCEEEE AVKNEEILGIAPLFLKNHSYGEFIFDQSFARLAQELNLNYYPKLIGMSPYSPVNGYQFLY EECCCCEEEEEHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCHHHEE KKNKDKNEITNLLINHIESFAIKNKVLSCNFLYIDESWGNHLKSLGYHEWINSSSEWRSN ECCCCHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCHHHHHHHCCHHHHHCCCHHHHCC GEKTFNDFLSRFNSNQRKNIKKERKSITKQDIKVEIFNEDDINQEILKKMHNFYEQHCSR CHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH WGVWGSKYLTSTFFETLVDNKKNLLLFSASKHDSDEIFAMSMCVKNQNNLWGRYWGSQKE CCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHEEHHHHHCCCCCCCHHHCCCHHH ISNLHFELCYYQPIEWAIKNGIHLFDPGAGGKHKRRRGFFAKSTISLHKWFDKNMENIIS HHCCEEEEEEECCHHHHHHCCCEEECCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHH PWLNEVNKQTEMEIDFENKSIPFK HHHHHHCCCCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA