The gene/protein map for NC_009089 is currently unavailable.
Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126699226

Identifier: 126699226

GI number: 126699226

Start: 1878219

End: 1878836

Strand: Direct

Name: 126699226

Synonym: CD1622

Alternate gene names: NA

Gene position: 1878219-1878836 (Clockwise)

Preceding gene: 126699225

Following gene: 126699227

Centisome position: 43.78

GC content: 27.02

Gene sequence:

>618_bases
ATGTGTAAAAAAACGTATTTATTAGTGGTAAGTATGCTTATAGCGGGTTTATTAACTGCATGTAGTGGGAGTCCAACTAA
GGATTCAGGACAAGCACAAGATAATACAAAAAAGGAGGCAAATGCATCAAATAACGCTTTAAAAGATGAAAAAAATAATG
AAAATTTAATGGAACAAGATTTTAAAGTGCCATACACAGATGCAATAAACATATTTAAAGATAAATATAAGGATGCTGAT
ATAGTAGATTTAAGTCTTGAGAGAGATTTAAATAAATTTGTTTATACTGTGGAAGGTGTAGATGATAATAATGAATATAA
GATGAAAATTGATGCTAATACAAAAGATGTATTAGAAGATAAAACAGAAAAGTTGGATTCAGAAGATTTAAATGGAGTTG
CTAGAAAAGAAAAATTAGATTTAAATGACATAATGACACCTCAACAAGCTATGGAAATTGCATTAAAAGAACAAAATGGA
ATAGTTAAAGAATGGAGTTTAGACAAAGATTTAGATGTTACTTTTTATAAAATAAGAATAGATAAAGATAAAAATGAATA
TGACATAAAAGTAGATTCTAAAAAGGGAACTGTATTGAAGGTAGAAAAAGAAGATTAG

Upstream 100 bases:

>100_bases
TAAAATTGATAAAATAGGAGGAATTTTTAATATAAAAGGGTAAATAAAGGGTTTAGAGGGCATAATATAGAATAAATTAA
TATATTTAAGGAGGGTTTTT

Downstream 100 bases:

>100_bases
AAGATTTAAACTATCTTTAAAATAATTTCTTTTTTGAATAAATTTTGTTTAAAATATAACAAGCAGGGTATAAAGAGACT
AAATAACTATTTTAGGAGGA

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MCKKTYLLVVSMLIAGLLTACSGSPTKDSGQAQDNTKKEANASNNALKDEKNNENLMEQDFKVPYTDAINIFKDKYKDAD
IVDLSLERDLNKFVYTVEGVDDNNEYKMKIDANTKDVLEDKTEKLDSEDLNGVARKEKLDLNDIMTPQQAMEIALKEQNG
IVKEWSLDKDLDVTFYKIRIDKDKNEYDIKVDSKKGTVLKVEKED

Sequences:

>Translated_205_residues
MCKKTYLLVVSMLIAGLLTACSGSPTKDSGQAQDNTKKEANASNNALKDEKNNENLMEQDFKVPYTDAINIFKDKYKDAD
IVDLSLERDLNKFVYTVEGVDDNNEYKMKIDANTKDVLEDKTEKLDSEDLNGVARKEKLDLNDIMTPQQAMEIALKEQNG
IVKEWSLDKDLDVTFYKIRIDKDKNEYDIKVDSKKGTVLKVEKED
>Mature_205_residues
MCKKTYLLVVSMLIAGLLTACSGSPTKDSGQAQDNTKKEANASNNALKDEKNNENLMEQDFKVPYTDAINIFKDKYKDAD
IVDLSLERDLNKFVYTVEGVDDNNEYKMKIDANTKDVLEDKTEKLDSEDLNGVARKEKLDLNDIMTPQQAMEIALKEQNG
IVKEWSLDKDLDVTFYKIRIDKDKNEYDIKVDSKKGTVLKVEKED

Specific function: Unknown

COG id: COG3212

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23362; Mature: 23362

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCKKTYLLVVSMLIAGLLTACSGSPTKDSGQAQDNTKKEANASNNALKDEKNNENLMEQD
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHH
FKVPYTDAINIFKDKYKDADIVDLSLERDLNKFVYTVEGVDDNNEYKMKIDANTKDVLED
CCCCHHHHHHHHHHHCCCCCEEEEHHHHCCCEEEEEEECCCCCCCEEEEECCCCHHHHHH
KTEKLDSEDLNGVARKEKLDLNDIMTPQQAMEIALKEQNGIVKEWSLDKDLDVTFYKIRI
HHHHCCCHHCCCHHHHHCCCHHHCCCHHHHHHHHHHHCCCCEEECCCCCCCCEEEEEEEE
DKDKNEYDIKVDSKKGTVLKVEKED
ECCCCEEEEEEECCCCCEEEEECCC
>Mature Secondary Structure
MCKKTYLLVVSMLIAGLLTACSGSPTKDSGQAQDNTKKEANASNNALKDEKNNENLMEQD
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHH
FKVPYTDAINIFKDKYKDADIVDLSLERDLNKFVYTVEGVDDNNEYKMKIDANTKDVLED
CCCCHHHHHHHHHHHCCCCCEEEEHHHHCCCEEEEEEECCCCCCCEEEEECCCCHHHHHH
KTEKLDSEDLNGVARKEKLDLNDIMTPQQAMEIALKEQNGIVKEWSLDKDLDVTFYKIRI
HHHHCCCHHCCCHHHHHCCCHHHCCCHHHHHHHHHHHCCCCEEECCCCCCCCEEEEEEEE
DKDKNEYDIKVDSKKGTVLKVEKED
ECCCCEEEEEEECCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA