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The map label for this gene is potB [H]

Identifier: 126698609

GI number: 126698609

Start: 1196813

End: 1197649

Strand: Direct

Name: potB [H]

Synonym: CD1025

Alternate gene names: 126698609

Gene position: 1196813-1197649 (Clockwise)

Preceding gene: 126698608

Following gene: 126698610

Centisome position: 27.9

GC content: 30.82

Gene sequence:

>837_bases
ATGAAAAGAAAATCTTTTTTAGCATATCCATATGTAGTTTGGAGTGCGATATTTGTAATAATTCCTTTAATATTAGTAGT
ATTTTTTAGTTTTACAAAAGAATCAGGTGGAGGTTATGCCTTTACACTTGAGAATTATAAAGAAGTAATTGACCCTATAT
ATATGAAAGTTTTTGGGCGTTCTATTCTTTTAGCAGGAGGAGCTACATTAATATGCCTTATAGTTGGTTATCCAGTGGCA
TATATAATTTCAAAGGCTCGTGTAAGTAGAAGAGGTTCATTAATATTATTGTTTATTCTTCCTATGTGGATGAACTTTCT
TTTAAGAACATATGCATGGGTTGCTATATTAGGAAAAAATGGACTTTTAAATACATTTTTAGGTTGGTTTGGAATACAAC
CATTAGCAATTTTGTATACTAATTTTGCTATACTTTTAGGTATGGTGTATAACTTTTTACCATTTATGGTTCTTCCAATA
TATACAGCACTATCAAAGATGGATAATGATTTGATAAACGCTGCTCATGACTTGGGTGCAAATAATATGACAGTTTTTAG
AAAAATTATATTTCCTTTGAGTTTGCCAGGTGTAATGTCTGGAATAACTATGGTATTTATGCCAGCAGTCACTACTTTTG
CAATATCAAGACTGTTAGGTGGAGGTAAAATAATGCTGGTTGGAGATTTGATTGAACAACAGTTTACAGTTGTTGGAGAT
TGGAACTTTGGTTCAGCTATATCGATATTTATGATGATAGTAATATTAATATCTATGTCTATAATGTCAAAATTTGGAGA
TGAATCTGACAAAGAAGGCGGTGGGTTACTATTTTAA

Upstream 100 bases:

>100_bases
TGGATACTTCATAATACTAAAAATGCTGAGGTTGGGACTGAACTAGGCATGGATATATATCCAGAAGATATCCATATAAT
GAGAAAAGAGAATAACTAAG

Downstream 100 bases:

>100_bases
AATTAAAGAAAATAACTTCTAATATATATTTAGCATTAGTATTCTTATTTTTGTATGCACCCATATTTGCTTTGGTACTA
TTTTCTTTCAATGATTCAAA

Product: spermidine/putrescine ABC transporter permease

Products: ADP; phosphate; putrescine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MKRKSFLAYPYVVWSAIFVIIPLILVVFFSFTKESGGGYAFTLENYKEVIDPIYMKVFGRSILLAGGATLICLIVGYPVA
YIISKARVSRRGSLILLFILPMWMNFLLRTYAWVAILGKNGLLNTFLGWFGIQPLAILYTNFAILLGMVYNFLPFMVLPI
YTALSKMDNDLINAAHDLGANNMTVFRKIIFPLSLPGVMSGITMVFMPAVTTFAISRLLGGGKIMLVGDLIEQQFTVVGD
WNFGSAISIFMMIVILISMSIMSKFGDESDKEGGGLLF

Sequences:

>Translated_278_residues
MKRKSFLAYPYVVWSAIFVIIPLILVVFFSFTKESGGGYAFTLENYKEVIDPIYMKVFGRSILLAGGATLICLIVGYPVA
YIISKARVSRRGSLILLFILPMWMNFLLRTYAWVAILGKNGLLNTFLGWFGIQPLAILYTNFAILLGMVYNFLPFMVLPI
YTALSKMDNDLINAAHDLGANNMTVFRKIIFPLSLPGVMSGITMVFMPAVTTFAISRLLGGGKIMLVGDLIEQQFTVVGD
WNFGSAISIFMMIVILISMSIMSKFGDESDKEGGGLLF
>Mature_278_residues
MKRKSFLAYPYVVWSAIFVIIPLILVVFFSFTKESGGGYAFTLENYKEVIDPIYMKVFGRSILLAGGATLICLIVGYPVA
YIISKARVSRRGSLILLFILPMWMNFLLRTYAWVAILGKNGLLNTFLGWFGIQPLAILYTNFAILLGMVYNFLPFMVLPI
YTALSKMDNDLINAAHDLGANNMTVFRKIIFPLSLPGVMSGITMVFMPAVTTFAISRLLGGGKIMLVGDLIEQQFTVVGD
WNFGSAISIFMMIVILISMSIMSKFGDESDKEGGGLLF

Specific function: Required for the activity of the bacterial periplasmic transport system of putrescine and spermidine [H]

COG id: COG1176

COG function: function code E; ABC-type spermidine/putrescine transport system, permease component I

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787080, Length=226, Percent_Identity=42.9203539823009, Blast_Score=197, Evalue=7e-52,
Organism=Escherichia coli, GI1787369, Length=247, Percent_Identity=40.080971659919, Blast_Score=196, Evalue=1e-51,
Organism=Escherichia coli, GI1787713, Length=239, Percent_Identity=24.6861924686192, Blast_Score=106, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30867; Mature: 30867

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRKSFLAYPYVVWSAIFVIIPLILVVFFSFTKESGGGYAFTLENYKEVIDPIYMKVFGR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHCC
SILLAGGATLICLIVGYPVAYIISKARVSRRGSLILLFILPMWMNFLLRTYAWVAILGKN
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
GLLNTFLGWFGIQPLAILYTNFAILLGMVYNFLPFMVLPIYTALSKMDNDLINAAHDLGA
CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NNMTVFRKIIFPLSLPGVMSGITMVFMPAVTTFAISRLLGGGKIMLVGDLIEQQFTVVGD
CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHEEEEEC
WNFGSAISIFMMIVILISMSIMSKFGDESDKEGGGLLF
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MKRKSFLAYPYVVWSAIFVIIPLILVVFFSFTKESGGGYAFTLENYKEVIDPIYMKVFGR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHCC
SILLAGGATLICLIVGYPVAYIISKARVSRRGSLILLFILPMWMNFLLRTYAWVAILGKN
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
GLLNTFLGWFGIQPLAILYTNFAILLGMVYNFLPFMVLPIYTALSKMDNDLINAAHDLGA
CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NNMTVFRKIIFPLSLPGVMSGITMVFMPAVTTFAISRLLGGGKIMLVGDLIEQQFTVVGD
CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHEEEEEC
WNFGSAISIFMMIVILISMSIMSKFGDESDKEGGGLLF
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; putrescine [Periplasm]; H2O [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]