Definition | Clostridium difficile 630 chromosome, complete genome. |
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Accession | NC_009089 |
Length | 4,290,252 |
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The map label for this gene is 126698591
Identifier: 126698591
GI number: 126698591
Start: 1175631
End: 1175894
Strand: Direct
Name: 126698591
Synonym: CD1007
Alternate gene names: NA
Gene position: 1175631-1175894 (Clockwise)
Preceding gene: 126698590
Following gene: 126698593
Centisome position: 27.4
GC content: 32.2
Gene sequence:
>264_bases ATGGAAGAAACTAAATTTTGCCAATGCTGTGCAATGCCAATGGGACAAACTGATGAATTATATGGGACAAATAAAGATGG AAGTAAAAGTACTGATTATTGTAGTTATTGTTTTAAAGATGGTGAGTTTACAGCTGATATAAGTATGGAAGAGATGATAG AAGTTTGTATCCCTCATATGCTTCAAAGTAATAAGGATATGACTGAAGATGAAGCAAGAACAATGATGAACAATTTCTTT CCAACATTAAAACGCTGGAAATAA
Upstream 100 bases:
>100_bases TTCATTTTTTATTACTAATATGACATAAACATGTCATATTAGCATTGATATACTTTTAATATGGTTAAGAGCCAAAGAAA AATATAAGGAGTGATTTAAA
Downstream 100 bases:
>100_bases TTTTATGCAAAATTAGTTATATGCAAAACATGAAATATGGTGTTGAGAATAAGGGGTGGTGTGCTTTATAGCATACCACC TGTTTTGTTACTTGGAGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 87; Mature: 87
Protein sequence:
>87_residues MEETKFCQCCAMPMGQTDELYGTNKDGSKSTDYCSYCFKDGEFTADISMEEMIEVCIPHMLQSNKDMTEDEARTMMNNFF PTLKRWK
Sequences:
>Translated_87_residues MEETKFCQCCAMPMGQTDELYGTNKDGSKSTDYCSYCFKDGEFTADISMEEMIEVCIPHMLQSNKDMTEDEARTMMNNFF PTLKRWK >Mature_87_residues MEETKFCQCCAMPMGQTDELYGTNKDGSKSTDYCSYCFKDGEFTADISMEEMIEVCIPHMLQSNKDMTEDEARTMMNNFF PTLKRWK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10140; Mature: 10140
Theoretical pI: Translated: 4.26; Mature: 4.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.9 %Cys (Translated Protein) 10.3 %Met (Translated Protein) 17.2 %Cys+Met (Translated Protein) 6.9 %Cys (Mature Protein) 10.3 %Met (Mature Protein) 17.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEETKFCQCCAMPMGQTDELYGTNKDGSKSTDYCSYCFKDGEFTADISMEEMIEVCIPHM CCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEECCCHHHHHHHHHHHH LQSNKDMTEDEARTMMNNFFPTLKRWK HHCCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MEETKFCQCCAMPMGQTDELYGTNKDGSKSTDYCSYCFKDGEFTADISMEEMIEVCIPHM CCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEECCCHHHHHHHHHHHH LQSNKDMTEDEARTMMNNFFPTLKRWK HHCCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA