Definition | Clostridium difficile 630 chromosome, complete genome. |
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Accession | NC_009089 |
Length | 4,290,252 |
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The map label for this gene is 126698590
Identifier: 126698590
GI number: 126698590
Start: 1175092
End: 1175481
Strand: Direct
Name: 126698590
Synonym: CD1006
Alternate gene names: NA
Gene position: 1175092-1175481 (Clockwise)
Preceding gene: 126698589
Following gene: 126698591
Centisome position: 27.39
GC content: 34.87
Gene sequence:
>390_bases ATGATGGAATATAAAGTTAATGACCAAGAACTTAATGCTTCAATGTTTATCCCATTCGTCAACAGGATATGGCCAGGAGA TTATGATATGGATAAAACACAGACTGCATTATCAAAAACTTTGAATATAACTGCTTATGATGATAAAGTGCTTGTAGGAT GTCTGCGAGTTCTTTCAGATGGTTATTATTTTGGAACAATTACAGAATTGCTTGTTCTTCCAGAGTATCAGAAACAAGGC ATTGGTAGTAAGCTTTTCCAGCTTGCTAAAGAGAACACCCCAACTATGCTATATTTTGGTGCACAGCCAGGAGTAGAAGA GTTCTATGAAAAAAATGGGTGCCAAAGAAGTCTGCAATCCTACATAATAAAAAAGAAAGATAGTTATTAA
Upstream 100 bases:
>100_bases AAAAATATAGGAAGGCAGATTTTTATTGTTGCGTATATATGAGAATGATATAATATGAATATTATAAATTAATAAATTTA AATTTATGGAGGTACAAGAG
Downstream 100 bases:
>100_bases AGTTCCAGCTTTCAAGAATCTTAAAAGTACAATATTTTAGTGGAATCATTTCATTTTTTATTACTAATATGACATAAACA TGTCATATTAGCATTGATAT
Product: acetyltransferase
Products: NA
Alternate protein names: Acetyltransferase
Number of amino acids: Translated: 129; Mature: 129
Protein sequence:
>129_residues MMEYKVNDQELNASMFIPFVNRIWPGDYDMDKTQTALSKTLNITAYDDKVLVGCLRVLSDGYYFGTITELLVLPEYQKQG IGSKLFQLAKENTPTMLYFGAQPGVEEFYEKNGCQRSLQSYIIKKKDSY
Sequences:
>Translated_129_residues MMEYKVNDQELNASMFIPFVNRIWPGDYDMDKTQTALSKTLNITAYDDKVLVGCLRVLSDGYYFGTITELLVLPEYQKQG IGSKLFQLAKENTPTMLYFGAQPGVEEFYEKNGCQRSLQSYIIKKKDSY >Mature_129_residues MMEYKVNDQELNASMFIPFVNRIWPGDYDMDKTQTALSKTLNITAYDDKVLVGCLRVLSDGYYFGTITELLVLPEYQKQG IGSKLFQLAKENTPTMLYFGAQPGVEEFYEKNGCQRSLQSYIIKKKDSY
Specific function: Unknown
COG id: COG0454
COG function: function code KR; Histone acetyltransferase HPA2 and related acetyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14853; Mature: 14853
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMEYKVNDQELNASMFIPFVNRIWPGDYDMDKTQTALSKTLNITAYDDKVLVGCLRVLSD CCCCCCCHHHCCHHEEHHHHHHCCCCCCCCCHHHHHHHHHCCEEECCCHHHHHHHHHHHC GYYFGTITELLVLPEYQKQGIGSKLFQLAKENTPTMLYFGAQPGVEEFYEKNGCQRSLQS CCCHHHHHHHHHCCCHHHCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHCCHHHHHHH YIIKKKDSY HHHHCCCCC >Mature Secondary Structure MMEYKVNDQELNASMFIPFVNRIWPGDYDMDKTQTALSKTLNITAYDDKVLVGCLRVLSD CCCCCCCHHHCCHHEEHHHHHHCCCCCCCCCHHHHHHHHHCCEEECCCHHHHHHHHHHHC GYYFGTITELLVLPEYQKQGIGSKLFQLAKENTPTMLYFGAQPGVEEFYEKNGCQRSLQS CCCHHHHHHHHHCCCHHHCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHCCHHHHHHH YIIKKKDSY HHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA