The gene/protein map for NC_009089 is currently unavailable.
Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126698580

Identifier: 126698580

GI number: 126698580

Start: 1161080

End: 1162330

Strand: Direct

Name: 126698580

Synonym: CD0996

Alternate gene names: NA

Gene position: 1161080-1162330 (Clockwise)

Preceding gene: 126698579

Following gene: 126698581

Centisome position: 27.06

GC content: 28.62

Gene sequence:

>1251_bases
ATGGCAACAATTAAACCATTTAAGGCGATTAGACCAAATAAATATATAGTAGATAAAGTAGCAGCACTTCCTTACGATGT
TATGAATAGTAAAGAAGCTAGAAGAATTGCAGAAGGGAATCCATATTCATTTTTGCATATAGATAAATCAGAAATTGATT
TAGATGAAAATATAGATTTATATGATGAAAAAGTTTATTTAAAAGCGCGAGAAAATTTAGATGAGTTTCGAAAACAAGAA
ATTCTAGTAAAAGATGACAAAGAGTGTATATATATATATAAACAAATCATGGATGGTAGAGCTCAAGTTGGTATAGTAGC
ATGTATATCAGTTGATGAAAGCTTGAATGGAACAATAAAAAAACATGAGTACACTCGACCAGAAAAGGAAATTGATAGAA
CTAAACACATAAAATACTGTGATGCTAATACGGGAACTATACTTGTAACTTACAAACATCAAAGGGTGATAGATGATATA
ATCAATGATTTTATGGATAATAATGAACCTTTATATGATTTCATAACAGATGACAAGATAGAGCATACAGTATGGAAGAT
TGATAATGATGATATAATAGATAACCTAGTAGATAAATTTGAAAAATTAGATTATCTATACATTGCAGATGGTCATCATA
GGACAGCTTCAGCAGAAAATGTAGCCAAAGAAATGAGAGCTAAAAATCCAAATTATACTGGAAAAGAAGAATTTAATTAC
TTCATAGCAATGATTGCACCAGATGAGAATTTAATGGTTTTGGATTATAATAGGGTTATCAAAGACTTAAATGGTTTAAG
CGAGGAAGAATTTATAAATAAAATAAAAGAAAATTTTGAACTAGAAGAAATAGAAGGAAAAGAAAAATATAAACCTGACA
AAAAAGGAACTTTCGGAATGTACCTAGGTGATAAGTGGTATAAAATGAAAGCAAATAAAAATTTATTAGAAATAGAAGAC
CCTGTTGACTCATTAGACATTTCTATATTACAAGACTATGTTATTGATGCTATTTTAGGAATTGATAATCCTAGAGTAGA
TAAAAGAATTGATTTTATCGGTGGAATTAGAGGTCTTGAAGAATTAGAAAAAAGAGTTAATGAAGATATGAAAGTAGCAT
TTGCAATGTATCCTACTAGTATTGAAGATTTAATAAGAGTAGCAGATGCAAATAAGATAATGCCAGCTAAGTCAACATGG
TTTGAACCTAAAGTAAGATGTGGTCTATTCTTACATGAAATAAATGAATAA

Upstream 100 bases:

>100_bases
GACGAAATAGTAAATGTGATTCAAGATTTCTTTCTTGACTTCAACAATCTAATAGGGGTAGCATTATAAAATATTTTGTA
TAATTAGGAGGAAATTAGTA

Downstream 100 bases:

>100_bases
TTAATAAAGGGCTAAAAAGTGCACAATTCACTTTTTAGCCCTTGTTTTTTTGATTGAAAATCGTATGTGGAATATAAATT
CTATAAGTTGATATTCTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 416; Mature: 415

Protein sequence:

>416_residues
MATIKPFKAIRPNKYIVDKVAALPYDVMNSKEARRIAEGNPYSFLHIDKSEIDLDENIDLYDEKVYLKARENLDEFRKQE
ILVKDDKECIYIYKQIMDGRAQVGIVACISVDESLNGTIKKHEYTRPEKEIDRTKHIKYCDANTGTILVTYKHQRVIDDI
INDFMDNNEPLYDFITDDKIEHTVWKIDNDDIIDNLVDKFEKLDYLYIADGHHRTASAENVAKEMRAKNPNYTGKEEFNY
FIAMIAPDENLMVLDYNRVIKDLNGLSEEEFINKIKENFELEEIEGKEKYKPDKKGTFGMYLGDKWYKMKANKNLLEIED
PVDSLDISILQDYVIDAILGIDNPRVDKRIDFIGGIRGLEELEKRVNEDMKVAFAMYPTSIEDLIRVADANKIMPAKSTW
FEPKVRCGLFLHEINE

Sequences:

>Translated_416_residues
MATIKPFKAIRPNKYIVDKVAALPYDVMNSKEARRIAEGNPYSFLHIDKSEIDLDENIDLYDEKVYLKARENLDEFRKQE
ILVKDDKECIYIYKQIMDGRAQVGIVACISVDESLNGTIKKHEYTRPEKEIDRTKHIKYCDANTGTILVTYKHQRVIDDI
INDFMDNNEPLYDFITDDKIEHTVWKIDNDDIIDNLVDKFEKLDYLYIADGHHRTASAENVAKEMRAKNPNYTGKEEFNY
FIAMIAPDENLMVLDYNRVIKDLNGLSEEEFINKIKENFELEEIEGKEKYKPDKKGTFGMYLGDKWYKMKANKNLLEIED
PVDSLDISILQDYVIDAILGIDNPRVDKRIDFIGGIRGLEELEKRVNEDMKVAFAMYPTSIEDLIRVADANKIMPAKSTW
FEPKVRCGLFLHEINE
>Mature_415_residues
ATIKPFKAIRPNKYIVDKVAALPYDVMNSKEARRIAEGNPYSFLHIDKSEIDLDENIDLYDEKVYLKARENLDEFRKQEI
LVKDDKECIYIYKQIMDGRAQVGIVACISVDESLNGTIKKHEYTRPEKEIDRTKHIKYCDANTGTILVTYKHQRVIDDII
NDFMDNNEPLYDFITDDKIEHTVWKIDNDDIIDNLVDKFEKLDYLYIADGHHRTASAENVAKEMRAKNPNYTGKEEFNYF
IAMIAPDENLMVLDYNRVIKDLNGLSEEEFINKIKENFELEEIEGKEKYKPDKKGTFGMYLGDKWYKMKANKNLLEIEDP
VDSLDISILQDYVIDAILGIDNPRVDKRIDFIGGIRGLEELEKRVNEDMKVAFAMYPTSIEDLIRVADANKIMPAKSTWF
EPKVRCGLFLHEINE

Specific function: Unknown

COG id: COG4198

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48532; Mature: 48401

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATIKPFKAIRPNKYIVDKVAALPYDVMNSKEARRIAEGNPYSFLHIDKSEIDLDENIDL
CCCCCCCHHCCCCHHHHHHHHHCCHHHHCCHHHHHHHCCCCEEEEEECHHHCCCCCCCCC
YDEKVYLKARENLDEFRKQEILVKDDKECIYIYKQIMDGRAQVGIVACISVDESLNGTIK
CCCEEEEEHHHCHHHHHHCCEEEECCCHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCEE
KHEYTRPEKEIDRTKHIKYCDANTGTILVTYKHQRVIDDIINDFMDNNEPLYDFITDDKI
CCCCCCCHHHHHHHHCEEEEECCCCEEEEEECHHHHHHHHHHHHHCCCCCEEEECCCCCC
EHTVWKIDNDDIIDNLVDKFEKLDYLYIADGHHRTASAENVAKEMRAKNPNYTGKEEFNY
CEEEEECCCHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCEE
FIAMIAPDENLMVLDYNRVIKDLNGLSEEEFINKIKENFELEEIEGKEKYKPDKKGTFGM
EEEEEECCCCEEEEEHHHHHHHHCCCCHHHHHHHHHHCCCCHHCCCCHHCCCCCCCEEEE
YLGDKWYKMKANKNLLEIEDPVDSLDISILQDYVIDAILGIDNPRVDKRIDFIGGIRGLE
EECCEEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHH
ELEKRVNEDMKVAFAMYPTSIEDLIRVADANKIMPAKSTWFEPKVRCGLFLHEINE
HHHHHCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCC
>Mature Secondary Structure 
ATIKPFKAIRPNKYIVDKVAALPYDVMNSKEARRIAEGNPYSFLHIDKSEIDLDENIDL
CCCCCCHHCCCCHHHHHHHHHCCHHHHCCHHHHHHHCCCCEEEEEECHHHCCCCCCCCC
YDEKVYLKARENLDEFRKQEILVKDDKECIYIYKQIMDGRAQVGIVACISVDESLNGTIK
CCCEEEEEHHHCHHHHHHCCEEEECCCHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCEE
KHEYTRPEKEIDRTKHIKYCDANTGTILVTYKHQRVIDDIINDFMDNNEPLYDFITDDKI
CCCCCCCHHHHHHHHCEEEEECCCCEEEEEECHHHHHHHHHHHHHCCCCCEEEECCCCCC
EHTVWKIDNDDIIDNLVDKFEKLDYLYIADGHHRTASAENVAKEMRAKNPNYTGKEEFNY
CEEEEECCCHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCEE
FIAMIAPDENLMVLDYNRVIKDLNGLSEEEFINKIKENFELEEIEGKEKYKPDKKGTFGM
EEEEEECCCCEEEEEHHHHHHHHCCCCHHHHHHHHHHCCCCHHCCCCHHCCCCCCCEEEE
YLGDKWYKMKANKNLLEIEDPVDSLDISILQDYVIDAILGIDNPRVDKRIDFIGGIRGLE
EECCEEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHH
ELEKRVNEDMKVAFAMYPTSIEDLIRVADANKIMPAKSTWFEPKVRCGLFLHEINE
HHHHHCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA