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The map label for this gene is ycdX [C]

Identifier: 126698571

GI number: 126698571

Start: 1151277

End: 1151996

Strand: Direct

Name: ycdX [C]

Synonym: CD0987

Alternate gene names: 126698571

Gene position: 1151277-1151996 (Clockwise)

Preceding gene: 126698570

Following gene: 126698572

Centisome position: 26.83

GC content: 30.14

Gene sequence:

>720_bases
ATGAAAAAGTCTATTATGGATGTACATTGTCACACTCTAATAAGTGGACATGCACATAGTACTTTCAAGGAAAATGTCGA
AGAGGCGAGTAAGAAGAATATAAAATACTTAGGAATATCAGACCATGGACCTAATATGCCAGGAGGACCACATCCATTCT
ATTTTTATAATTTGCATTTGCTTCCACGTGAAGTGCAAGGCGTAAAGATTCTTAGAGGAATAGAAGGAAATATAATGGAT
TATAATGGTAATTTAGATGTTCAAGAAGATATGTTGCAACATTTGGATTATATAATCGCAAGTTTGCATAGACCTTGTAT
AGCTTCTGGTACAAAAGAAGAAAATACAAATGCTATTTTAAAAGTTATGGATAAACCTAAGGTAAAAATAATTGGACATC
CAGATGACAGTAGGTATCCTTTAGATTATGAACCTATAGTAAAAAAAGCTAAAGATAAAAATATCCTTTTAGAAATAAAT
AATTCATCATTAAGTTCAAACTCTCATAGAACGGGTACTTGGGAAAATGTAAGTCATATGTTGACATTGTGTAAAACATA
TGGTGCAAGAGTAATTCTTGGTACTGACTCTCATATATGTTATTCTATAGGAGAATTTGAAAATGCAGAAAAAGTTTTAG
AAGCAGTAGATTTTCCAGATGAATTAGTCATAAATTATCATGAAGATGAAATTATAGAATTTTTTGATATAAATTTTTAG

Upstream 100 bases:

>100_bases
CTGTTTTAAAACGTTACACTGTCTATTATGACAGCTTTAGTTTTGAAATAGCCCTTTAGCTATTTTCACGAATTTATGTA
AAATATTAGGAGGAAATTTA

Downstream 100 bases:

>100_bases
AATCTTGGGAGTGAAAAAATTTGAGTAAAAATAAGTTTATCTATATGAATTATTATGACAATGGTTATTTTAAAAAAGGA
ATGACTATATATATGGTTTT

Product: hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MKKSIMDVHCHTLISGHAHSTFKENVEEASKKNIKYLGISDHGPNMPGGPHPFYFYNLHLLPREVQGVKILRGIEGNIMD
YNGNLDVQEDMLQHLDYIIASLHRPCIASGTKEENTNAILKVMDKPKVKIIGHPDDSRYPLDYEPIVKKAKDKNILLEIN
NSSLSSNSHRTGTWENVSHMLTLCKTYGARVILGTDSHICYSIGEFENAEKVLEAVDFPDELVINYHEDEIIEFFDINF

Sequences:

>Translated_239_residues
MKKSIMDVHCHTLISGHAHSTFKENVEEASKKNIKYLGISDHGPNMPGGPHPFYFYNLHLLPREVQGVKILRGIEGNIMD
YNGNLDVQEDMLQHLDYIIASLHRPCIASGTKEENTNAILKVMDKPKVKIIGHPDDSRYPLDYEPIVKKAKDKNILLEIN
NSSLSSNSHRTGTWENVSHMLTLCKTYGARVILGTDSHICYSIGEFENAEKVLEAVDFPDELVINYHEDEIIEFFDINF
>Mature_239_residues
MKKSIMDVHCHTLISGHAHSTFKENVEEASKKNIKYLGISDHGPNMPGGPHPFYFYNLHLLPREVQGVKILRGIEGNIMD
YNGNLDVQEDMLQHLDYIIASLHRPCIASGTKEENTNAILKVMDKPKVKIIGHPDDSRYPLDYEPIVKKAKDKNILLEIN
NSSLSSNSHRTGTWENVSHMLTLCKTYGARVILGTDSHICYSIGEFENAEKVLEAVDFPDELVINYHEDEIIEFFDINF

Specific function: Unknown

COG id: COG1387

COG function: function code ER; Histidinol phosphatase and related hydrolases of the PHP family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PHP family [H]

Homologues:

Organism=Escherichia coli, GI1787271, Length=231, Percent_Identity=38.961038961039, Blast_Score=178, Evalue=3e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004013
- InterPro:   IPR003141
- InterPro:   IPR016195 [H]

Pfam domain/function: PF02811 PHP [H]

EC number: NA

Molecular weight: Translated: 27149; Mature: 27149

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSIMDVHCHTLISGHAHSTFKENVEEASKKNIKYLGISDHGPNMPGGPHPFYFYNLHL
CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCEEEEEEEE
LPREVQGVKILRGIEGNIMDYNGNLDVQEDMLQHLDYIIASLHRPCIASGTKEENTNAIL
CCCCCCCEEEEECCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCEEE
KVMDKPKVKIIGHPDDSRYPLDYEPIVKKAKDKNILLEINNSSLSSNSHRTGTWENVSHM
EEECCCCEEEEECCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHH
LTLCKTYGARVILGTDSHICYSIGEFENAEKVLEAVDFPDELVINYHEDEIIEFFDINF
HHHHHHHCCEEEEECCCCEEEECCCCCCHHHHHHHHCCCHHHEEEECCCCEEEEEECCC
>Mature Secondary Structure
MKKSIMDVHCHTLISGHAHSTFKENVEEASKKNIKYLGISDHGPNMPGGPHPFYFYNLHL
CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCEEEEEEEE
LPREVQGVKILRGIEGNIMDYNGNLDVQEDMLQHLDYIIASLHRPCIASGTKEENTNAIL
CCCCCCCEEEEECCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCEEE
KVMDKPKVKIIGHPDDSRYPLDYEPIVKKAKDKNILLEINNSSLSSNSHRTGTWENVSHM
EEECCCCEEEEECCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHH
LTLCKTYGARVILGTDSHICYSIGEFENAEKVLEAVDFPDELVINYHEDEIIEFFDINF
HHHHHHHCCEEEEECCCCEEEECCCCCCHHHHHHHHCCCHHHEEEECCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA