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The map label for this gene is ispH [H]

Identifier: 126698570

GI number: 126698570

Start: 1149885

End: 1151159

Strand: Direct

Name: ispH [H]

Synonym: CD0986

Alternate gene names: 126698570

Gene position: 1149885-1151159 (Clockwise)

Preceding gene: 126698569

Following gene: 126698571

Centisome position: 26.8

GC content: 29.8

Gene sequence:

>1275_bases
ATGTTTATAATGGAAAATGATTTAACAATGCAAGAATTACTTGACCAGCAAGAACAAGTATTCAGCAAAGTGAAAGTTGG
AGAATTGACAACTGGAAAAATAACTGCAGTGAGAAATGATGAAGTACAATTAGGATTAGACTATGGGTTTGATGGAATAA
TACCTATAAGTGAATTGAACATAGAAAAAAATCAATATATAGAAGATATATACCACATAGGTGATGAAATAACTGCTGTA
ATAACAAAAGTATCTCAAAAAGATGGTACAATAACTTTATCTAAATTACAACTTGACAAAAGAAATGATTTTGCCGAGTT
ACAAAAGGCTTATGATGAACATAGAATAATAACTGTAAATGTTGAAAAGAATATAGATAAAGGTGTATTTGCTAATTACA
ATACATATACATTTTTTATACCAATTTCTCAACTTGATACAAAATTTATTACAGATACATCTAAATTTGTTGGTCTTAAC
TTAGAAGTTTATATAAAAGAATTGGATGTTAGAAAAAATAGACTTGTAGCATCTCATAGAGATGTATTACAAGAGCGTAT
AAATAAAGAGAGAGAAGAAAGAAGAGCTCAAATTAAGGCAGAAAAAGAAGCTGAAAGAGCAAGAATTAAGCAAGAAAGAG
AAGAAGAAAAAGCTCGTATCAAAGCAGCTAAAGAAGACTTATTTAATTCTCTTGAAGTTGGACAAAAAAGAGATGGTAAG
GTGACAAAGATAATGCCTTATGGTGCATTTGTGGATATTGGTGGGATTGAAGGATTAGCACATATAAATAATTTAGCTTG
GACAAGAGTTGAAAGTGTTGAAGATGTTGTTTCAGAGGGACAAGAAGTAGAAGTTTATGTGTTGGATGTAAATAAAGAGA
CTAAAAAAATTGCCTTGGCATTAAAAGACATAAATAATGACCCTTGGGATTTAATAGCAAAAGAAGTACAAATTGATGAT
GTTGTCAATGCTAAAGTTCTTAGAATAATAGAAAAAGGGGCTTTTGTTCAAATTAAAGAAGGTGTAGATGCGTATTTACC
AATATCTGAATTGAGTGATACTAGAGTGGCTAAAGTTACTAATGTTGTTAATATTGGAGATGAGGTTAAAGTTAAGATTC
TTGATTTTAAACCAAAGACTAAGAGAATGTTGGTTTCAATAAAAGAAGCAACTAGAGAGCCAGAAGAGGATATAACAGAA
TACCTAGAAGTAGAGGAATCTTTAGGAAGTATTGGAGAATTATTTAAAGATAAATTTAAAGATTTAGAAGTGTAA

Upstream 100 bases:

>100_bases
GAAGTTGAATTTATTTTAAAAATTGTAGTAAGAAAAATGTAAGTATTTGCAATATTAATGGTATAATATTTACAGATATG
ATAATCAATAAGAGGAAAGG

Downstream 100 bases:

>100_bases
AATAATTGAAAATGGGGCTGTTTTAAAACGTTACACTGTCTATTATGACAGCTTTAGTTTTGAAATAGCCCTTTAGCTAT
TTTCACGAATTTATGTAAAA

Product: 30S ribosomal protein S1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 424; Mature: 424

Protein sequence:

>424_residues
MFIMENDLTMQELLDQQEQVFSKVKVGELTTGKITAVRNDEVQLGLDYGFDGIIPISELNIEKNQYIEDIYHIGDEITAV
ITKVSQKDGTITLSKLQLDKRNDFAELQKAYDEHRIITVNVEKNIDKGVFANYNTYTFFIPISQLDTKFITDTSKFVGLN
LEVYIKELDVRKNRLVASHRDVLQERINKEREERRAQIKAEKEAERARIKQEREEEKARIKAAKEDLFNSLEVGQKRDGK
VTKIMPYGAFVDIGGIEGLAHINNLAWTRVESVEDVVSEGQEVEVYVLDVNKETKKIALALKDINNDPWDLIAKEVQIDD
VVNAKVLRIIEKGAFVQIKEGVDAYLPISELSDTRVAKVTNVVNIGDEVKVKILDFKPKTKRMLVSIKEATREPEEDITE
YLEVEESLGSIGELFKDKFKDLEV

Sequences:

>Translated_424_residues
MFIMENDLTMQELLDQQEQVFSKVKVGELTTGKITAVRNDEVQLGLDYGFDGIIPISELNIEKNQYIEDIYHIGDEITAV
ITKVSQKDGTITLSKLQLDKRNDFAELQKAYDEHRIITVNVEKNIDKGVFANYNTYTFFIPISQLDTKFITDTSKFVGLN
LEVYIKELDVRKNRLVASHRDVLQERINKEREERRAQIKAEKEAERARIKQEREEEKARIKAAKEDLFNSLEVGQKRDGK
VTKIMPYGAFVDIGGIEGLAHINNLAWTRVESVEDVVSEGQEVEVYVLDVNKETKKIALALKDINNDPWDLIAKEVQIDD
VVNAKVLRIIEKGAFVQIKEGVDAYLPISELSDTRVAKVTNVVNIGDEVKVKILDFKPKTKRMLVSIKEATREPEEDITE
YLEVEESLGSIGELFKDKFKDLEV
>Mature_424_residues
MFIMENDLTMQELLDQQEQVFSKVKVGELTTGKITAVRNDEVQLGLDYGFDGIIPISELNIEKNQYIEDIYHIGDEITAV
ITKVSQKDGTITLSKLQLDKRNDFAELQKAYDEHRIITVNVEKNIDKGVFANYNTYTFFIPISQLDTKFITDTSKFVGLN
LEVYIKELDVRKNRLVASHRDVLQERINKEREERRAQIKAEKEAERARIKQEREEEKARIKAAKEDLFNSLEVGQKRDGK
VTKIMPYGAFVDIGGIEGLAHINNLAWTRVESVEDVVSEGQEVEVYVLDVNKETKKIALALKDINNDPWDLIAKEVQIDD
VVNAKVLRIIEKGAFVQIKEGVDAYLPISELSDTRVAKVTNVVNIGDEVKVKILDFKPKTKRMLVSIKEATREPEEDITE
YLEVEESLGSIGELFKDKFKDLEV

Specific function: Converts 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP) [H]

COG id: COG0539

COG function: function code J; Ribosomal protein S1

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 S1 motif domains [H]

Homologues:

Organism=Escherichia coli, GI1787140, Length=377, Percent_Identity=28.3819628647215, Blast_Score=140, Evalue=2e-34,
Organism=Escherichia coli, GI145693187, Length=80, Percent_Identity=47.5, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: 16,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003451
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR000110
- InterPro:   IPR022967 [H]

Pfam domain/function: PF02401 LYTB; PF00575 S1 [H]

EC number: =1.17.1.2 [H]

Molecular weight: Translated: 48485; Mature: 48485

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFIMENDLTMQELLDQQEQVFSKVKVGELTTGKITAVRNDEVQLGLDYGFDGIIPISELN
CEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEECCCCCCEEHHHCC
IEKNQYIEDIYHIGDEITAVITKVSQKDGTITLSKLQLDKRNDFAELQKAYDEHRIITVN
CCHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHCCCEEEEEE
VEKNIDKGVFANYNTYTFFIPISQLDTKFITDTSKFVGLNLEVYIKELDVRKNRLVASHR
ECCCCCCCCEECCCEEEEEEEHHHCCCHHHCCCHHHEECCCEEEEEEHHCHHHHHHHHHH
DVLQERINKEREERRAQIKAEKEAERARIKQEREEEKARIKAAKEDLFNSLEVGQKRDGK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
VTKIMPYGAFVDIGGIEGLAHINNLAWTRVESVEDVVSEGQEVEVYVLDVNKETKKIALA
EEEEECCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHEEEE
LKDINNDPWDLIAKEVQIDDVVNAKVLRIIEKGAFVQIKEGVDAYLPISELSDTRVAKVT
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEECHHHCCCCHHHHHH
NVVNIGDEVKVKILDFKPKTKRMLVSIKEATREPEEDITEYLEVEESLGSIGELFKDKFK
HHEECCCCEEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
DLEV
CCCC
>Mature Secondary Structure
MFIMENDLTMQELLDQQEQVFSKVKVGELTTGKITAVRNDEVQLGLDYGFDGIIPISELN
CEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEECCCCCCEEHHHCC
IEKNQYIEDIYHIGDEITAVITKVSQKDGTITLSKLQLDKRNDFAELQKAYDEHRIITVN
CCHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHCCCEEEEEE
VEKNIDKGVFANYNTYTFFIPISQLDTKFITDTSKFVGLNLEVYIKELDVRKNRLVASHR
ECCCCCCCCEECCCEEEEEEEHHHCCCHHHCCCHHHEECCCEEEEEEHHCHHHHHHHHHH
DVLQERINKEREERRAQIKAEKEAERARIKQEREEEKARIKAAKEDLFNSLEVGQKRDGK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
VTKIMPYGAFVDIGGIEGLAHINNLAWTRVESVEDVVSEGQEVEVYVLDVNKETKKIALA
EEEEECCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHEEEE
LKDINNDPWDLIAKEVQIDDVVNAKVLRIIEKGAFVQIKEGVDAYLPISELSDTRVAKVT
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEECHHHCCCCHHHHHH
NVVNIGDEVKVKILDFKPKTKRMLVSIKEATREPEEDITEYLEVEESLGSIGELFKDKFK
HHEECCCCEEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
DLEV
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11466286 [H]