Definition | Clostridium difficile 630 chromosome, complete genome. |
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Accession | NC_009089 |
Length | 4,290,252 |
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The map label for this gene is 126698561
Identifier: 126698561
GI number: 126698561
Start: 1140823
End: 1141527
Strand: Direct
Name: 126698561
Synonym: CD0977
Alternate gene names: NA
Gene position: 1140823-1141527 (Clockwise)
Preceding gene: 126698560
Following gene: 126698562
Centisome position: 26.59
GC content: 27.66
Gene sequence:
>705_bases ATGAGATTGAAATTTAAATCTAAAGAGAGTACTAGCAGGGAAAAACATCAGTCAGCAGAATCTCTAGCAAAGTTTATGTT AAACAATAAATCGTTCTTAGGTATAACACTGTCAATATTAGATGAATGGAAAAATAATATTGATAGTAGTAAAATTGAGG ATATTGTAAAAAATAATTTTAGATTTGAGGAATCTATAATTAAAGATAAGAACTATAAAGAGTTTATAAAATTATTAAAC TCATTTTATAACGGAACAGAAGATGAGTTAAACGGTAGAAGAGGAAGATTTTTAGAGTTGATTTGGGATGTTGTAGGAAC ATATAACGGAAAAGAATTTACACAAAAAATAGATGAGGCCATAGTGTTAGAAAATGAAGTGAAAATATCAGAAAAAGATA TAGATATTGTCTATATAGGCGAAATTAAAGATAAAGGGATAGCAAATTTTATTGAAATGCACGAATGTAAAGCATCAGCA AACACAACACTAAGAACTCCATTAAAACCAAAACATAGAGGAAAACTAGAACTGATGCAATCAGTAATTGAAATATCAGA AACAGAAGAAATTAAATGTGATGGATTAATAATTACATTCAATGCTAACAAAAGAAGGCTTGAAAGAAAGCTAAAAAGCT ATGGATTTGAATACTTTAAAATAATTCCTAGAGCAGAAATAGAGGAAAGAGTGTTTAATAAGTAA
Upstream 100 bases:
>100_bases GTTCCAGTTAATATATGGCCTTATGCAAGAGAGATAATAAGTTCCATCACAACTCGTATTGGATATCCTGCTCTAGTAAT TTCTCCATATAAGGCATAAT
Downstream 100 bases:
>100_bases TTTACACTAATTTATACAAATTAATAGATACTAAAAGTACTCTTTTTGTAAGAGTGCTATTTTTTTGAAATTTATTAACA TATAAACTATCAAGAACCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 234; Mature: 234
Protein sequence:
>234_residues MRLKFKSKESTSREKHQSAESLAKFMLNNKSFLGITLSILDEWKNNIDSSKIEDIVKNNFRFEESIIKDKNYKEFIKLLN SFYNGTEDELNGRRGRFLELIWDVVGTYNGKEFTQKIDEAIVLENEVKISEKDIDIVYIGEIKDKGIANFIEMHECKASA NTTLRTPLKPKHRGKLELMQSVIEISETEEIKCDGLIITFNANKRRLERKLKSYGFEYFKIIPRAEIEERVFNK
Sequences:
>Translated_234_residues MRLKFKSKESTSREKHQSAESLAKFMLNNKSFLGITLSILDEWKNNIDSSKIEDIVKNNFRFEESIIKDKNYKEFIKLLN SFYNGTEDELNGRRGRFLELIWDVVGTYNGKEFTQKIDEAIVLENEVKISEKDIDIVYIGEIKDKGIANFIEMHECKASA NTTLRTPLKPKHRGKLELMQSVIEISETEEIKCDGLIITFNANKRRLERKLKSYGFEYFKIIPRAEIEERVFNK >Mature_234_residues MRLKFKSKESTSREKHQSAESLAKFMLNNKSFLGITLSILDEWKNNIDSSKIEDIVKNNFRFEESIIKDKNYKEFIKLLN SFYNGTEDELNGRRGRFLELIWDVVGTYNGKEFTQKIDEAIVLENEVKISEKDIDIVYIGEIKDKGIANFIEMHECKASA NTTLRTPLKPKHRGKLELMQSVIEISETEEIKCDGLIITFNANKRRLERKLKSYGFEYFKIIPRAEIEERVFNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27432; Mature: 27432
Theoretical pI: Translated: 8.61; Mature: 8.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLKFKSKESTSREKHQSAESLAKFMLNNKSFLGITLSILDEWKNNIDSSKIEDIVKNNF CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCC RFEESIIKDKNYKEFIKLLNSFYNGTEDELNGRRGRFLELIWDVVGTYNGKEFTQKIDEA CHHHHHHCCCCHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH IVLENEVKISEKDIDIVYIGEIKDKGIANFIEMHECKASANTTLRTPLKPKHRGKLELMQ HHCCCCCEECCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHH SVIEISETEEIKCDGLIITFNANKRRLERKLKSYGFEYFKIIPRAEIEERVFNK HHHHHCCCCCEEECCEEEEECCCHHHHHHHHHHCCCHHHHCCCCHHHHHHHCCC >Mature Secondary Structure MRLKFKSKESTSREKHQSAESLAKFMLNNKSFLGITLSILDEWKNNIDSSKIEDIVKNNF CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCC RFEESIIKDKNYKEFIKLLNSFYNGTEDELNGRRGRFLELIWDVVGTYNGKEFTQKIDEA CHHHHHHCCCCHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH IVLENEVKISEKDIDIVYIGEIKDKGIANFIEMHECKASANTTLRTPLKPKHRGKLELMQ HHCCCCCEECCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHH SVIEISETEEIKCDGLIITFNANKRRLERKLKSYGFEYFKIIPRAEIEERVFNK HHHHHCCCCCEEECCEEEEECCCHHHHHHHHHHCCCHHHHCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA