Definition | Clostridium difficile 630 chromosome, complete genome. |
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Accession | NC_009089 |
Length | 4,290,252 |
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The map label for this gene is 126698560
Identifier: 126698560
GI number: 126698560
Start: 1140390
End: 1140821
Strand: Direct
Name: 126698560
Synonym: CD0976
Alternate gene names: NA
Gene position: 1140390-1140821 (Clockwise)
Preceding gene: 126698559
Following gene: 126698561
Centisome position: 26.58
GC content: 25.0
Gene sequence:
>432_bases ATGGAATTAGATAAAATGAAGTATAGAAAATTAGTTAATGATGTGGAACTAGTAAATGTGCTAATTAAAAATATTGAATT AAGCGATGTTATATTACATAAAGATGAAAATATCAAAAATGAAAGTATCAAATGTGATGTTAATATGAAATATGAGTGTG AAGAATTTAAAAAATTATCAGAAGTAGTAGAATTTTATCCTAAATTTAACTTAAGAATAGAATGTCAAGGAGAAGGTTTG GTAAATTTAAAATTTGAACTAAGGGCAATTTATAAATTTAATTCAATAGAGGATTATGAAGATGATTATATATTAATGTT TATAGAACGAAATGTTCCAGTTAATATATGGCCTTATGCAAGAGAGATAATAAGTTCCATCACAACTCGTATTGGATATC CTGCTCTAGTAATTTCTCCATATAAGGCATAA
Upstream 100 bases:
>100_bases ACAATGAACATATTGAATTTGATTTTAACTTTAAGTTTGAAATAGAGGATTATGATAATGATGATTATGCATTGGCAGCT TAGATTTTGGAGGAAGATTA
Downstream 100 bases:
>100_bases TATGAGATTGAAATTTAAATCTAAAGAGAGTACTAGCAGGGAAAAACATCAGTCAGCAGAATCTCTAGCAAAGTTTATGT TAAACAATAAATCGTTCTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MELDKMKYRKLVNDVELVNVLIKNIELSDVILHKDENIKNESIKCDVNMKYECEEFKKLSEVVEFYPKFNLRIECQGEGL VNLKFELRAIYKFNSIEDYEDDYILMFIERNVPVNIWPYAREIISSITTRIGYPALVISPYKA
Sequences:
>Translated_143_residues MELDKMKYRKLVNDVELVNVLIKNIELSDVILHKDENIKNESIKCDVNMKYECEEFKKLSEVVEFYPKFNLRIECQGEGL VNLKFELRAIYKFNSIEDYEDDYILMFIERNVPVNIWPYAREIISSITTRIGYPALVISPYKA >Mature_143_residues MELDKMKYRKLVNDVELVNVLIKNIELSDVILHKDENIKNESIKCDVNMKYECEEFKKLSEVVEFYPKFNLRIECQGEGL VNLKFELRAIYKFNSIEDYEDDYILMFIERNVPVNIWPYAREIISSITTRIGYPALVISPYKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16982; Mature: 16982
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELDKMKYRKLVNDVELVNVLIKNIELSDVILHKDENIKNESIKCDVNMKYECEEFKKLS CCCHHHHHHHHHHHHHHHHHHHHCCCHHHEEEECCCCCCCCEEEEEECCCCCHHHHHHHH EVVEFYPKFNLRIECQGEGLVNLKFELRAIYKFNSIEDYEDDYILMFIERNVPVNIWPYA HHHHHCCCCCEEEEECCCCEEEEEEEEEEEEEECCCCCCCCCEEEEEEECCCCEEECHHH REIISSITTRIGYPALVISPYKA HHHHHHHHHHCCCCEEEEECCCC >Mature Secondary Structure MELDKMKYRKLVNDVELVNVLIKNIELSDVILHKDENIKNESIKCDVNMKYECEEFKKLS CCCHHHHHHHHHHHHHHHHHHHHCCCHHHEEEECCCCCCCCEEEEEECCCCCHHHHHHHH EVVEFYPKFNLRIECQGEGLVNLKFELRAIYKFNSIEDYEDDYILMFIERNVPVNIWPYA HHHHHCCCCCEEEEECCCCEEEEEEEEEEEEEECCCCCCCCCEEEEEEECCCCEEECHHH REIISSITTRIGYPALVISPYKA HHHHHHHHHHCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA