The gene/protein map for NC_009089 is currently unavailable.
Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126698560

Identifier: 126698560

GI number: 126698560

Start: 1140390

End: 1140821

Strand: Direct

Name: 126698560

Synonym: CD0976

Alternate gene names: NA

Gene position: 1140390-1140821 (Clockwise)

Preceding gene: 126698559

Following gene: 126698561

Centisome position: 26.58

GC content: 25.0

Gene sequence:

>432_bases
ATGGAATTAGATAAAATGAAGTATAGAAAATTAGTTAATGATGTGGAACTAGTAAATGTGCTAATTAAAAATATTGAATT
AAGCGATGTTATATTACATAAAGATGAAAATATCAAAAATGAAAGTATCAAATGTGATGTTAATATGAAATATGAGTGTG
AAGAATTTAAAAAATTATCAGAAGTAGTAGAATTTTATCCTAAATTTAACTTAAGAATAGAATGTCAAGGAGAAGGTTTG
GTAAATTTAAAATTTGAACTAAGGGCAATTTATAAATTTAATTCAATAGAGGATTATGAAGATGATTATATATTAATGTT
TATAGAACGAAATGTTCCAGTTAATATATGGCCTTATGCAAGAGAGATAATAAGTTCCATCACAACTCGTATTGGATATC
CTGCTCTAGTAATTTCTCCATATAAGGCATAA

Upstream 100 bases:

>100_bases
ACAATGAACATATTGAATTTGATTTTAACTTTAAGTTTGAAATAGAGGATTATGATAATGATGATTATGCATTGGCAGCT
TAGATTTTGGAGGAAGATTA

Downstream 100 bases:

>100_bases
TATGAGATTGAAATTTAAATCTAAAGAGAGTACTAGCAGGGAAAAACATCAGTCAGCAGAATCTCTAGCAAAGTTTATGT
TAAACAATAAATCGTTCTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MELDKMKYRKLVNDVELVNVLIKNIELSDVILHKDENIKNESIKCDVNMKYECEEFKKLSEVVEFYPKFNLRIECQGEGL
VNLKFELRAIYKFNSIEDYEDDYILMFIERNVPVNIWPYAREIISSITTRIGYPALVISPYKA

Sequences:

>Translated_143_residues
MELDKMKYRKLVNDVELVNVLIKNIELSDVILHKDENIKNESIKCDVNMKYECEEFKKLSEVVEFYPKFNLRIECQGEGL
VNLKFELRAIYKFNSIEDYEDDYILMFIERNVPVNIWPYAREIISSITTRIGYPALVISPYKA
>Mature_143_residues
MELDKMKYRKLVNDVELVNVLIKNIELSDVILHKDENIKNESIKCDVNMKYECEEFKKLSEVVEFYPKFNLRIECQGEGL
VNLKFELRAIYKFNSIEDYEDDYILMFIERNVPVNIWPYAREIISSITTRIGYPALVISPYKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16982; Mature: 16982

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELDKMKYRKLVNDVELVNVLIKNIELSDVILHKDENIKNESIKCDVNMKYECEEFKKLS
CCCHHHHHHHHHHHHHHHHHHHHCCCHHHEEEECCCCCCCCEEEEEECCCCCHHHHHHHH
EVVEFYPKFNLRIECQGEGLVNLKFELRAIYKFNSIEDYEDDYILMFIERNVPVNIWPYA
HHHHHCCCCCEEEEECCCCEEEEEEEEEEEEEECCCCCCCCCEEEEEEECCCCEEECHHH
REIISSITTRIGYPALVISPYKA
HHHHHHHHHHCCCCEEEEECCCC
>Mature Secondary Structure
MELDKMKYRKLVNDVELVNVLIKNIELSDVILHKDENIKNESIKCDVNMKYECEEFKKLS
CCCHHHHHHHHHHHHHHHHHHHHCCCHHHEEEECCCCCCCCEEEEEECCCCCHHHHHHHH
EVVEFYPKFNLRIECQGEGLVNLKFELRAIYKFNSIEDYEDDYILMFIERNVPVNIWPYA
HHHHHCCCCCEEEEECCCCEEEEEEEEEEEEEECCCCCCCCCEEEEEEECCCCEEECHHH
REIISSITTRIGYPALVISPYKA
HHHHHHHHHHCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA