Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
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Accession | NC_009079 |
Length | 2,352,693 |
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The map label for this gene is yvbG [H]
Identifier: 262192889
GI number: 262192889
Start: 1122548
End: 1123252
Strand: Direct
Name: yvbG [H]
Synonym: BMA10247_A1147
Alternate gene names: 262192889
Gene position: 1122548-1123252 (Clockwise)
Preceding gene: 126446301
Following gene: 126445785
Centisome position: 47.71
GC content: 68.37
Gene sequence:
>705_bases ATGGCGCGGCCGCGCGAGCGGCCTCCGATAACCCTTGTCCGTCCTTCCCGCTTCCCGATGATCGTCGACCGCCTGATCTC CGAAATCCTGTTCGGCTTCACCGGCCTCATGGGCATCATCAATCCGTTCGGCATCGCGTTCCTGTTCCTCGAGCGCACCG AGTCGCTGACCGAGGCGCAGCGCGCGGCGCTCGCGCGCAAGGTCGCGATCAACGCATTCATCGTGCTGCTCGCCGCGTTC TTCGTCGGCATCTCGCTCGAGGCGCTGCGCATCGGCGGCGGCCTCGCGGTCGCGGTGGCGGGCTGGCAGATGCTCAACGA GCCGGACGTGCCGACGGGCGGCGACACCGCCGCGCAGCCCGTCGAGCCGCGCAACGCGATGGCGCGCGCATTCTTCCCGC TGACGATTCCGCTGACCACCGGCCCCGGCTCGATCGCGACCGCGATCGCGCTGAACGCGAACCGCACGCACAAGCTCTCG GAGTTCGTGCTGTCGAGCATCGTGTCGGTCGCGGTATCGGCGCTCGCCGCGCTCGTGATCTGGCAGACGTACAGTCGCGC CGCGTTTCTCGCGCGCTATCTCGGCACCGAGGGCACGAAGGTCGCGATGCGCGTGTCGGCGTTCCTGCTGCTGTGCGTCG GCGTGCAGATCATGCTCACGGGCTTCTCCGAGTTCCTGCGGCCGATCGCCGATCAGGTGAAGTGA
Upstream 100 bases:
>100_bases GGTGTGCGGCATCGGCGAAGCGCCCGCCGGCGAGCGGCGGATGAACGAGGACGGCCGGCGCGCGGCCGTGGCCGATGGGC GCGGGCGCGCATGCTCTACA
Downstream 100 bases:
>100_bases AGGCGGCTCGATGCCGCCCCTGGCGGGCGACGCGTCGCGCCGGCGCGAAACGCGCGCGCCGGGAGGGCGGCGCCCGCCGT GCCGGTCGTATCGATCCGTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 234; Mature: 233
Protein sequence:
>234_residues MARPRERPPITLVRPSRFPMIVDRLISEILFGFTGLMGIINPFGIAFLFLERTESLTEAQRAALARKVAINAFIVLLAAF FVGISLEALRIGGGLAVAVAGWQMLNEPDVPTGGDTAAQPVEPRNAMARAFFPLTIPLTTGPGSIATAIALNANRTHKLS EFVLSSIVSVAVSALAALVIWQTYSRAAFLARYLGTEGTKVAMRVSAFLLLCVGVQIMLTGFSEFLRPIADQVK
Sequences:
>Translated_234_residues MARPRERPPITLVRPSRFPMIVDRLISEILFGFTGLMGIINPFGIAFLFLERTESLTEAQRAALARKVAINAFIVLLAAF FVGISLEALRIGGGLAVAVAGWQMLNEPDVPTGGDTAAQPVEPRNAMARAFFPLTIPLTTGPGSIATAIALNANRTHKLS EFVLSSIVSVAVSALAALVIWQTYSRAAFLARYLGTEGTKVAMRVSAFLLLCVGVQIMLTGFSEFLRPIADQVK >Mature_233_residues ARPRERPPITLVRPSRFPMIVDRLISEILFGFTGLMGIINPFGIAFLFLERTESLTEAQRAALARKVAINAFIVLLAAFF VGISLEALRIGGGLAVAVAGWQMLNEPDVPTGGDTAAQPVEPRNAMARAFFPLTIPLTTGPGSIATAIALNANRTHKLSE FVLSSIVSVAVSALAALVIWQTYSRAAFLARYLGTEGTKVAMRVSAFLLLCVGVQIMLTGFSEFLRPIADQVK
Specific function: Unknown
COG id: COG2095
COG function: function code U; Multiple antibiotic transporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0056 (marC) family [H]
Homologues:
Organism=Escherichia coli, GI1787809, Length=201, Percent_Identity=28.3582089552239, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1787494, Length=199, Percent_Identity=28.643216080402, Blast_Score=74, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002771 [H]
Pfam domain/function: PF01914 MarC [H]
EC number: NA
Molecular weight: Translated: 25145; Mature: 25014
Theoretical pI: Translated: 10.80; Mature: 10.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARPRERPPITLVRPSRFPMIVDRLISEILFGFTGLMGIINPFGIAFLFLERTESLTEAQ CCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAALARKVAINAFIVLLAAFFVGISLEALRIGGGLAVAVAGWQMLNEPDVPTGGDTAAQP HHHHHHHHHHHHHHHHHHHHHHCCCHHHEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCC VEPRNAMARAFFPLTIPLTTGPGSIATAIALNANRTHKLSEFVLSSIVSVAVSALAALVI CCHHHHHHHHHEEEEEEEECCCCHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH WQTYSRAAFLARYLGTEGTKVAMRVSAFLLLCVGVQIMLTGFSEFLRPIADQVK HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ARPRERPPITLVRPSRFPMIVDRLISEILFGFTGLMGIINPFGIAFLFLERTESLTEAQ CCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAALARKVAINAFIVLLAAFFVGISLEALRIGGGLAVAVAGWQMLNEPDVPTGGDTAAQP HHHHHHHHHHHHHHHHHHHHHHCCCHHHEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCC VEPRNAMARAFFPLTIPLTTGPGSIATAIALNANRTHKLSEFVLSSIVSVAVSALAALVI CCHHHHHHHHHEEEEEEEECCCCHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH WQTYSRAAFLARYLGTEGTKVAMRVSAFLLLCVGVQIMLTGFSEFLRPIADQVK HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]